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Sed0021049 (gene) of Chayote v1 genome

Gene IDSed0021049
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:8982937..8983317
RNA-Seq ExpressionSed0021049
SyntenySed0021049
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024172256.1 uncharacterized protein LOC112178331 [Rosa chinensis]8.8e-0433.73Show/hide
Query:  ILVESDCCSLVMAVKEGCLRNSSYEVVLVEIE--------KFYNFSFRNANMVAHRLAKWACVSGLSLDWGPLIPPSIEGWVE
        ++ ESDC  LV A++      S    ++ +I          F++  +R +NM+AH+LAK+A VSGL + W   +PP   G +E
Subjt:  ILVESDCCSLVMAVKEGCLRNSSYEVVLVEIE--------KFYNFSFRNANMVAHRLAKWACVSGLSLDWGPLIPPSIEGWVE
TrEMBL top hitse value%identityAlignment
A0A2P6PGU0 Putative RNA-directed DNA polymerase9.5e-0433.33Show/hide
Query:  ILVESDCCSLVMAVKEGCLRNSSYEVVLVEIE--------KFYNFSFRNANMVAHRLAKWACVSGLSLDWGPLIPPSI
        ++ ESDC  LV A++      S    ++ +I          F++  +R +NM+AH+LAK+A VSGL + W   +PP +
Subjt:  ILVESDCCSLVMAVKEGCLRNSSYEVVLVEIE--------KFYNFSFRNANMVAHRLAKWACVSGLSLDWGPLIPPSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGGGGAGTTGTGTGGCCGCCTCATCGTGTTCTCTTTTCAACTTTGATGCCTTTGTGGCTAAAGCGTTGGCAGTACTTCATGGCCTCCGTTGGGTTCTGGACAAT
TTTAGTCGAATCTGACTGTTGCTCCCTGGTAATGGCTGTTAAGGAAGGGTGTCTAAGGAATTCAAGCTATGAGGTGGTTTTGGTGGAAATTGAAAAATTCTACAACTTTA
GTTTTAGAAATGCCAATATGGTAGCTCATAGATTGGCCAAATGGGCTTGTGTAAGTGGTCTTTCGTTGGATTGGGGTCCTCTCATTCCTCCCTCGATTGAAGGATGGGTG
GAACTAGATGTTGTTTGTATGATCTCTTTGGGCGGCAGCCTTGTGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAGGGGAGTTGTGTGGCCGCCTCATCGTGTTCTCTTTTCAACTTTGATGCCTTTGTGGCTAAAGCGTTGGCAGTACTTCATGGCCTCCGTTGGGTTCTGGACAAT
TTTAGTCGAATCTGACTGTTGCTCCCTGGTAATGGCTGTTAAGGAAGGGTGTCTAAGGAATTCAAGCTATGAGGTGGTTTTGGTGGAAATTGAAAAATTCTACAACTTTA
GTTTTAGAAATGCCAATATGGTAGCTCATAGATTGGCCAAATGGGCTTGTGTAAGTGGTCTTTCGTTGGATTGGGGTCCTCTCATTCCTCCCTCGATTGAAGGATGGGTG
GAACTAGATGTTGTTTGTATGATCTCTTTGGGCGGCAGCCTTGTGCTATAA
Protein sequenceShow/hide protein sequence
MIRGVVWPPHRVLFSTLMPLWLKRWQYFMASVGFWTILVESDCCSLVMAVKEGCLRNSSYEVVLVEIEKFYNFSFRNANMVAHRLAKWACVSGLSLDWGPLIPPSIEGWV
ELDVVCMISLGGSLVL