CuGenDBv2

Gene ID	Sed0021060
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG04:38014749..38015734
RNA-Seq Expression	Sed0021060
Synteny	Sed0021060
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KGN55027.1 hypothetical protein Csa_012520 [Cucumis sativus]

2.8e-57

78.06

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Query:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE------SGCGETPIRLLGEEGEGEEVGSRNSTAAVW
        MEALW+LEDKWKLSTQQAF+LLTCT AAV+GLCAAAWAKKRKG  EKK   R    RWW W A       SG GETP+RLLG E EGEE+GSRNSTAAVW
Subjt:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE------SGCGETPIRLLGEEGEGEEVGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL
        QRPILMGEKCEMLKYSGLILYDERGRLL +QIAAM+N +KEGE I VKTRLKDLL
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL

XP_008465611.1 PREDICTED: uncharacterized protein LOC103503252 [Cucumis melo]

8.6e-59

79.35

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Query:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE------SGCGETPIRLLGEEGEGEEVGSRNSTAAVW
        MEALW+LEDKWKLSTQQAF+LLTCT AAV+ LCAAAWA+KRKG  EKK  RR    RWW WAAE       G GETP+RLLGEE EGEE+GSRNSTAAVW
Subjt:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE------SGCGETPIRLLGEEGEGEEVGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL
        QRPILMGEKCEMLKYSGLILYDERGRLL DQIAAM+N +KEGE I VKTRLKDLL
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL

XP_022976857.1 uncharacterized protein LOC111477103 isoform X2 [Cucurbita maxima]

9.9e-55

76.77

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Query:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRT-AAPRWWW--AAE----SGCGETPIRLLGEEGEGEEVGSRNSTAAVW
        MEALW+LEDKWKLSTQQAFILLTCTA AV+G CAA WAK+RK   EK  RR+T A  RWWW  AA+    SG GETP+RLLG  GEGE+ GSRNSTAAVW
Subjt:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRT-AAPRWWW--AAE----SGCGETPIRLLGEEGEGEEVGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL
        QRPILMGEKCEMLKYSGLILYDERGRLL DQIAAM+N +K+G+ +IVKTRLKDLL
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL

XP_023534959.1 uncharacterized protein LOC111796532 isoform X2 [Cucurbita pepo subsp. pepo]

3.6e-57

78.71

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Query:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRT-AAPRWWW--AAE----SGCGETPIRLLGEEGEGEEVGSRNSTAAVW
        MEALW+LEDKWKLSTQQAFILLTCTA AV+G CAAAWAK+RK   EK  RR+T A  RWWW  AA+    SG GETP+RLLG EGEGE+ GSRNSTAAVW
Subjt:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRT-AAPRWWW--AAE----SGCGETPIRLLGEEGEGEEVGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL
        QRPILMGEKCEMLKYSGLILYDERGRLL DQIAAM+N +K+G+ IIVKTRLKDLL
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL

XP_038899822.1 uncharacterized protein LOC120087050 isoform X2 [Benincasa hispida]

2.1e-60

82.35

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Query:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE----SGCGETPIRLLGEEGEGEEVGSRNSTAAVWQR
        MEALW+LEDKWKLSTQQAFILLTCTA AVVG+C AAWAKKR+G  EKK  RR    RWW WAAE    SG GETP+RLL  EGEGEE+GSRNSTAAVWQR
Subjt:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE----SGCGETPIRLLGEEGEGEEVGSRNSTAAVWQR

Query:  PILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL
        PILMGEKCEMLKYSGLILYDERGRLL DQIAAM+N +KEGEAIIVKTRLKDLL
Subjt:  PILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L376 Uncharacterized protein

1.3e-57

78.06

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Query:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE------SGCGETPIRLLGEEGEGEEVGSRNSTAAVW
        MEALW+LEDKWKLSTQQAF+LLTCT AAV+GLCAAAWAKKRKG  EKK   R    RWW W A       SG GETP+RLLG E EGEE+GSRNSTAAVW
Subjt:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE------SGCGETPIRLLGEEGEGEEVGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL
        QRPILMGEKCEMLKYSGLILYDERGRLL +QIAAM+N +KEGE I VKTRLKDLL
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL

A0A1S3CQQ9 uncharacterized protein LOC103503252

4.2e-59

79.35

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Query:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE------SGCGETPIRLLGEEGEGEEVGSRNSTAAVW
        MEALW+LEDKWKLSTQQAF+LLTCT AAV+ LCAAAWA+KRKG  EKK  RR    RWW WAAE       G GETP+RLLGEE EGEE+GSRNSTAAVW
Subjt:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE------SGCGETPIRLLGEEGEGEEVGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL
        QRPILMGEKCEMLKYSGLILYDERGRLL DQIAAM+N +KEGE I VKTRLKDLL
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL

A0A5D3DW00 Uncharacterized protein

4.2e-59

79.35

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Query:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE------SGCGETPIRLLGEEGEGEEVGSRNSTAAVW
        MEALW+LEDKWKLSTQQAF+LLTCT AAV+ LCAAAWA+KRKG  EKK  RR    RWW WAAE       G GETP+RLLGEE EGEE+GSRNSTAAVW
Subjt:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWW-WAAE------SGCGETPIRLLGEEGEGEEVGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL
        QRPILMGEKCEMLKYSGLILYDERGRLL DQIAAM+N +KEGE I VKTRLKDLL
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL

A0A6J1IGV7 uncharacterized protein LOC111477103 isoform X2

4.8e-55

76.77

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Query:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRT-AAPRWWW--AAE----SGCGETPIRLLGEEGEGEEVGSRNSTAAVW
        MEALW+LEDKWKLSTQQAFILLTCTA AV+G CAA WAK+RK   EK  RR+T A  RWWW  AA+    SG GETP+RLLG  GEGE+ GSRNSTAAVW
Subjt:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRT-AAPRWWW--AAE----SGCGETPIRLLGEEGEGEEVGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL
        QRPILMGEKCEMLKYSGLILYDERGRLL DQIAAM+N +K+G+ +IVKTRLKDLL
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL

A0A6J1II18 uncharacterized protein LOC111477103 isoform X1

3.3e-48

77.14

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Query:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRT-AAPRWWW--AAE----SGCGETPIRLLGEEGEGEEVGSRNSTAAVW
        MEALW+LEDKWKLSTQQAFILLTCTA AV+G CAA WAK+RK   EK  RR+T A  RWWW  AA+    SG GETP+RLLG  GEGE+ GSRNSTAAVW
Subjt:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRT-AAPRWWW--AAE----SGCGETPIRLLGEEGEGEEVGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHK
        QRPILMGEKCEMLKYSGLILYDERGRLL DQIAAM+N +K
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49000.1 unknown protein

5.3e-06

48.84

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Query:  EEVGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLHD
        E+  +      +WQR ILMG KCE L +SG+I YD  GRLL++
Subjt:  EEVGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLHD

AT3G14760.1 unknown protein

6.7e-17

38.15

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Query:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAA----------------WAKKRKGSS---EKKGR------RRTAAPRWWWAAESGCGETPIRLLG
        MEALW LE+K KL+T++A ++L  TAAAV  LC AA                WA +    S   E+K +      +RT    + W++ +   E   R   
Subjt:  MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAA----------------WAKKRKGSS---EKKGR------RRTAAPRWWWAAESGCGETPIRLLG

Query:  EEGEGEEVGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL
             +E  S N+   VWQRPILMGEKCE+ ++SGLILYDE G   H      Q   K  ++ +V+T L+DLL
Subjt:  EEGEGEEVGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL

AT3G18560.1 unknown protein

2.6e-05

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Query:  ETPIRLLGEEGEGEEVGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLL
        +T + ++ EE E EE G       VWQR ILMG KCE L YSG+I YD  G  L
Subjt:  ETPIRLLGEEGEGEEVGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLL

Sequences

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CDS sequence

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ATGGAAGCTCTATGGAGTTTAGAAGACAAATGGAAGCTCTCAACCCAACAAGCCTTCATTCTCCTAACGTGCACGGCAGCCGCCGTGGTCGGGCTCTGCGCAGCGGCGTG
GGCGAAGAAGAGGAAGGGATCATCAGAGAAGAAAGGTCGCCGACGGACGGCAGCCCCAAGGTGGTGGTGGGCTGCGGAGAGCGGATGTGGAGAGACGCCGATCCGGCTGT
TGGGCGAAGAAGGGGAAGGGGAAGAAGTTGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAGCGGCCGATACTAATGGGGGAAAAATGTGAAATGCTGAAATACAGTGGC
CTTATTTTATATGACGAAAGAGGAAGGTTGTTGCACGATCAAATTGCCGCCATGCAAAATCCTCACAAGGAAGGAGAAGCAATAATAGTGAAGACAAGGTTGAAGGATCT
ACTCTGA

mRNA sequence

Show/hide mRNA sequence

ATAAGAGGCACCAACCAAGCTCCCATGGTATGAAGCCATGGAAGCTCTATGGAGTTTAGAAGACAAATGGAAGCTCTCAACCCAACAAGCCTTCATTCTCCTAACGTGCA
CGGCAGCCGCCGTGGTCGGGCTCTGCGCAGCGGCGTGGGCGAAGAAGAGGAAGGGATCATCAGAGAAGAAAGGTCGCCGACGGACGGCAGCCCCAAGGTGGTGGTGGGCT
GCGGAGAGCGGATGTGGAGAGACGCCGATCCGGCTGTTGGGCGAAGAAGGGGAAGGGGAAGAAGTTGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAGCGGCCGATACT
AATGGGGGAAAAATGTGAAATGCTGAAATACAGTGGCCTTATTTTATATGACGAAAGAGGAAGGTTGTTGCACGATCAAATTGCCGCCATGCAAAATCCTCACAAGGAAG
GAGAAGCAATAATAGTGAAGACAAGGTTGAAGGATCTACTCTGA

Protein sequence

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MEALWSLEDKWKLSTQQAFILLTCTAAAVVGLCAAAWAKKRKGSSEKKGRRRTAAPRWWWAAESGCGETPIRLLGEEGEGEEVGSRNSTAAVWQRPILMGEKCEMLKYSG
LILYDERGRLLHDQIAAMQNPHKEGEAIIVKTRLKDLL

Sed0021060 (gene) of Chayote v1 genome