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Sed0021110 (gene) of Chayote v1 genome

Gene IDSed0021110
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG09:2930570..2931361
RNA-Seq ExpressionSed0021110
SyntenySed0021110
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593936.1 hypothetical protein SDJN03_13412, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3077.66Show/hide
Query:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
        MAS A R++FRVVM VVLL V+FYVGRPLYWKISATVH+IR+NKQTV++G SQIVLEAQKSVGWYHDESDSGV D       GSVA+RRLLHQV
Subjt:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
XP_022930338.1 uncharacterized protein LOC111436812 isoform X3 [Cucurbita moschata]1.7e-3076.6Show/hide
Query:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
        MAS A R++FRVVM VVLL V+FYVGRPLYWKISATVH+IR+NKQTV++G SQIVLEAQKSVGWYHDESDSGV D       GSVA+RRLLHQ+
Subjt:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
XP_023000085.1 uncharacterized protein LOC111494388 isoform X1 [Cucurbita maxima]2.9e-3076.6Show/hide
Query:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
        MAS A R++FRVVM VVLL V+FYVGRPLYWKISATVH+IR NKQTV++G SQIVLEAQKSVGWYHDESDSGV D       GSVA+RRLLHQ+
Subjt:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
XP_023000087.1 uncharacterized protein LOC111494388 isoform X3 [Cucurbita maxima]2.9e-3076.6Show/hide
Query:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
        MAS A R++FRVVM VVLL V+FYVGRPLYWKISATVH+IR NKQTV++G SQIVLEAQKSVGWYHDESDSGV D       GSVA+RRLLHQ+
Subjt:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
XP_023514362.1 uncharacterized protein LOC111778653 isoform X3 [Cucurbita pepo subsp. pepo]2.9e-3076.6Show/hide
Query:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
        MAS A R++FRVVM VVLL V+FYVGRPLYWKISATVH+IR NKQTV++G SQIVLEAQKSVGWYHDESDSGV D       GSVA+RRLLHQ+
Subjt:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
TrEMBL top hitse value%identityAlignment
A0A6J1EQN0 uncharacterized protein LOC111436812 isoform X11.4e-3076.6Show/hide
Query:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
        MAS A R++FRVVM VVLL V+FYVGRPLYWKISATVH+IR+NKQTV++G SQIVLEAQKSVGWYHDESDSGV D       GSVA+RRLLHQ+
Subjt:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
A0A6J1EUV5 uncharacterized protein LOC111436812 isoform X38.3e-3176.6Show/hide
Query:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
        MAS A R++FRVVM VVLL V+FYVGRPLYWKISATVH+IR+NKQTV++G SQIVLEAQKSVGWYHDESDSGV D       GSVA+RRLLHQ+
Subjt:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
A0A6J1EWN5 uncharacterized protein LOC111436812 isoform X51.4e-3076.6Show/hide
Query:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
        MAS A R++FRVVM VVLL V+FYVGRPLYWKISATVH+IR+NKQTV++G SQIVLEAQKSVGWYHDESDSGV D       GSVA+RRLLHQ+
Subjt:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
A0A6J1KCK7 uncharacterized protein LOC111494388 isoform X31.4e-3076.6Show/hide
Query:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
        MAS A R++FRVVM VVLL V+FYVGRPLYWKISATVH+IR NKQTV++G SQIVLEAQKSVGWYHDESDSGV D       GSVA+RRLLHQ+
Subjt:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
A0A6J1KHD0 uncharacterized protein LOC111494388 isoform X11.4e-3076.6Show/hide
Query:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
        MAS A R++FRVVM VVLL V+FYVGRPLYWKISATVH+IR NKQTV++G SQIVLEAQKSVGWYHDESDSGV D       GSVA+RRLLHQ+
Subjt:  MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRD-------GSVASRRLLHQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18850.1 unknown protein9.4e-2764.04Show/hide
Query:  ASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRDGS------VASRRLL
        +SP  R+ FR V+ + L+ VLFYVGRPLYWKISAT+H+IR NKQ+V +G+SQIV EAQ+SVGWYHDESDSG R+G         SRRLL
Subjt:  ASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRDGS------VASRRLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCCGGCGGTTAGGGTTTCGTTTCGCGTTGTCATGGCGGTGGTTCTCCTCTTCGTTCTTTTCTACGTCGGTCGTCCTCTGTACTGGAAGATTTCTGCCACGGT
CCATGAGATTCGCGAGAACAAACAGACCGTCGAACAAGGTCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTCGGATGGTACCACGACGAGTCGGATTCGGGCGTCC
GTGATGGATCGGTTGCTTCTCGGAGGCTGCTTCATCAGGTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
CTGAATCGCGGGAAACTCTGCGCTCTTTCTCTCTCTGCAACACAAACTCACCGGAAACAATGGCGTCGCCGGCGGTTAGGGTTTCGTTTCGCGTTGTCATGGCGGTGGTT
CTCCTCTTCGTTCTTTTCTACGTCGGTCGTCCTCTGTACTGGAAGATTTCTGCCACGGTCCATGAGATTCGCGAGAACAAACAGACCGTCGAACAAGGTCTCTCTCAGAT
CGTTCTGGAAGCTCAGAAATCGGTCGGATGGTACCACGACGAGTCGGATTCGGGCGTCCGTGATGGATCGGTTGCTTCTCGGAGGCTGCTTCATCAGGTTTTTTGAAAAT
CTAAGTTGTTTGTGACTTGTGAATTGAATGGTTTCATATGCATTAGTAAAGTTCAATCAGTGGATCTGGAATTTTTATGCCGTGATAATGTGGTATAATGTCTGAATTAG
GAACTATTGAATTGCTTTAGTTAAGAGAATGTGAAGAAATCGTAATGCTTCAGCCTTAAGTTTCCAATTGGCATTATGCATTGTTAGTCACTTTTTTTTATGAGAAACGA
AAACATTTTCATTGATAAGATGGAAGTGTTCATACGTTTGTCCTTTTGGTCACTCGGGGATTATGGATAGTAGTATTTGTACGACGGGGGTAACTACTACTTCATGTTTT
CCTTCTGAAAAAATTATGATTTGTATATTAAAGAGCAA
Protein sequenceShow/hide protein sequence
MASPAVRVSFRVVMAVVLLFVLFYVGRPLYWKISATVHEIRENKQTVEQGLSQIVLEAQKSVGWYHDESDSGVRDGSVASRRLLHQVF