; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0021126 (gene) of Chayote v1 genome

Gene IDSed0021126
OrganismSechium edule (Chayote v1)
DescriptionRibonuclease H
Genome locationLG01:25533029..25534309
RNA-Seq ExpressionSed0021126
SyntenySed0021126
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148331.1 uncharacterized protein LOC111017012 [Momordica charantia]1.2e-0561.22Show/hide
Query:  EAYKSHQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG
        EA   HQ  NDALV+TL +ANI+V RILVDG SSA VL+LR ++ M++G
Subjt:  EAYKSHQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]3.5e-0568.18Show/hide
Query:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG
        H H ND LV+TL +AN KV RILVDG SSAD++SL AY AM LG
Subjt:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.0e-0568.18Show/hide
Query:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG
        H H NDALV+TL +AN+KV RILVDG SSAD++S  AY AM LG
Subjt:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG

XP_022158827.1 uncharacterized protein LOC111025291 [Momordica charantia]6.0e-0568.18Show/hide
Query:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG
        H H NDALV+TL +AN KV RILVDG SSAD++S  AY AM LG
Subjt:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG

XP_022158828.1 uncharacterized protein LOC111025292 [Momordica charantia]6.0e-0568.18Show/hide
Query:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG
        H H NDALV+TL +AN KV RILVDG SSAD++S  AY AM LG
Subjt:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG

TrEMBL top hitse value%identityAlignment
A0A6J1D520 uncharacterized protein LOC1110170125.8e-0661.22Show/hide
Query:  EAYKSHQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG
        EA   HQ  NDALV+TL +ANI+V RILVDG SSA VL+LR ++ M++G
Subjt:  EAYKSHQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG

A0A6J1D8C9 uncharacterized protein LOC1110183001.7e-0568.18Show/hide
Query:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG
        H H ND LV+TL +AN KV RILVDG SSAD++SL AY AM LG
Subjt:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG

A0A6J1DQY2 uncharacterized protein LOC1110223219.9e-0668.18Show/hide
Query:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG
        H H NDALV+TL +AN+KV RILVDG SSAD++S  AY AM LG
Subjt:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG

A0A6J1DX67 uncharacterized protein LOC1110252922.9e-0568.18Show/hide
Query:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG
        H H NDALV+TL +AN KV RILVDG SSAD++S  AY AM LG
Subjt:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG

A0A6J1DY78 uncharacterized protein LOC1110252912.9e-0568.18Show/hide
Query:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG
        H H NDALV+TL +AN KV RILVDG SSAD++S  AY AM LG
Subjt:  HQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCCGATCTCCTTTTTCCCACGGTCCGGAAGGAAGTATGGGCCTTAAAAAGTGGCTTCTAAAGGCCCATAAAAGGGACGAGATCCGGGCTACGACACGACCTCG
TCTCAGAGAAGAGCCCACGACTAGGGAAGCATATAAGTCACACCAACACCGTAATGATGCGTTGGTTGTCACTTTGACTGTAGCCAACATTAAAGTTCAGAGGATCCTAG
TCGATGGTAGAAGCTCAGCCGATGTGCTATCCCTACGAGCCTACAATGCCATGAAGCTGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCCGATCTCCTTTTTCCCACGGTCCGGAAGGAAGTATGGGCCTTAAAAAGTGGCTTCTAAAGGCCCATAAAAGGGACGAGATCCGGGCTACGACACGACCTCG
TCTCAGAGAAGAGCCCACGACTAGGGAAGCATATAAGTCACACCAACACCGTAATGATGCGTTGGTTGTCACTTTGACTGTAGCCAACATTAAAGTTCAGAGGATCCTAG
TCGATGGTAGAAGCTCAGCCGATGTGCTATCCCTACGAGCCTACAATGCCATGAAGCTGGGGTGA
Protein sequenceShow/hide protein sequence
MAARSPFSHGPEGSMGLKKWLLKAHKRDEIRATTRPRLREEPTTREAYKSHQHRNDALVVTLTVANIKVQRILVDGRSSADVLSLRAYNAMKLG