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Sed0021127 (gene) of Chayote v1 genome

Gene IDSed0021127
OrganismSechium edule (Chayote v1)
DescriptionLipoyl-binding domain-containing protein
Genome locationLG07:5889306..5892001
RNA-Seq ExpressionSed0021127
SyntenySed0021127
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575582.1 hypothetical protein SDJN03_26221, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1571.43Show/hide
Query:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI
        +IS SSR+ LRACC+ SP+T+TIT SET SEET KP S  SQ IPN  EVETLLT+ICDTSSIAEFE+K+
Subjt:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI

KAG7014123.1 accB [Cucurbita argyrosperma subsp. argyrosperma]5.2e-1571.43Show/hide
Query:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI
        +IS SSR+ LRACC+ SP+T+TIT SET SEET KP S  SQ IPN  EVETLLT+ICDTSSIAEFE+K+
Subjt:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI

XP_022953286.1 uncharacterized protein LOC111455878 [Cucurbita moschata]1.8e-1572.86Show/hide
Query:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI
        +IS SSR+ LRACC+ SP+TQTIT SET SEET KP S  SQ IPN  EVETLLT+ICDTSSIAEFE+K+
Subjt:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI

XP_022991822.1 uncharacterized protein LOC111488354 [Cucurbita maxima]8.9e-1571.43Show/hide
Query:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI
        +IS SSR+ LRACC+ SP+T+TIT SET SEET KP S  SQ IPN  EVETLLT+ICDTSSIAEFE+K+
Subjt:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI

XP_023548691.1 uncharacterized protein LOC111807271 [Cucurbita pepo subsp. pepo]5.2e-1571.43Show/hide
Query:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI
        +IS SSR+ LRACC+ SP+T+TIT SET SEET KP S  SQ IPN  EVETLLT+ICDTSSIAEFE+K+
Subjt:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI

TrEMBL top hitse value%identityAlignment
A0A0A0KA77 Lipoyl-binding domain-containing protein4.7e-1466.2Show/hide
Query:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKIT
        +IS+SS+K+L AC   SP  QT+  SET SEE  KP SL SQ IPNFHEVETLLT++CDTSSIAEFE+K++
Subjt:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKIT

A0A1S3CDF9 biotin carboxyl carrier protein of acetyl-CoA carboxylase isoform X19.6e-1567.61Show/hide
Query:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKIT
        +IS+SS+K+L AC S SP+TQT+  SET SEE  KP +L SQ IPN HEVETLLT+ICDTSSIAEFE+K++
Subjt:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKIT

A0A6J1CV60 uncharacterized protein LOC111014551 isoform X11.1e-1061.43Show/hide
Query:  ISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKIT
        IS+SSRK+L ACC        ITS ET S E  K  SL SQ IPN HEVETLLT+ICDTSSI EFE++++
Subjt:  ISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKIT

A0A6J1GMK4 uncharacterized protein LOC1114558788.6e-1672.86Show/hide
Query:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI
        +IS SSR+ LRACC+ SP+TQTIT SET SEET KP S  SQ IPN  EVETLLT+ICDTSSIAEFE+K+
Subjt:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI

A0A6J1JMY6 uncharacterized protein LOC1114883544.3e-1571.43Show/hide
Query:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI
        +IS SSR+ LRACC+ SP+T+TIT SET SEET KP S  SQ IPN  EVETLLT+ICDTSSIAEFE+K+
Subjt:  MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15690.1 Single hybrid motif superfamily protein2.6e-0443.4Show/hide
Query:  PDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI
        P  +T  + E    +  K   L +Q +P   EVE L+T ICD+SSIAEFE+K+
Subjt:  PDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI

AT3G15690.2 Single hybrid motif superfamily protein2.6e-0443.4Show/hide
Query:  PDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI
        P  +T  + E    +  K   L +Q +P   EVE L+T ICD+SSIAEFE+K+
Subjt:  PDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATCGTATTCGTCTCGAAAATCTTTGCGTGCTTGTTGTAGCGGATCGCCTGATACCCAGACCATAACCAGTTCAGAAACTGATTCTGAAGAAACAAAAAAGCCTTT
CAGTTTGACAAGCCAAGCTATCCCAAATTTTCATGAGGTTGAAACCCTGCTCACAAGCATATGTGACACATCTTCCATTGCAGAGTTTGAAATGAAAATAACCATGAACA
CAAAGTTGGATTGTTATGTTACATTTTGGTTAATTGTCCTTGTTGTACTGAACAGATTGCATTCACATAAAGCTTACCGTTCTGGAGAAGTCGTGAAGATACTGCGAAAA
GACGGCGGTAAGTCGGTTTTCGACGTTTTTTTCCCTTCAATATTGTTGAGTTTTGATCAATTATAG
mRNA sequenceShow/hide mRNA sequence
AAAACGGGTTTCAATTTTAATAGATTTCTCTTCTAGAAGCCCGTTTTGTCCCTAAGATCTTCTCATCTCGTTGAAATTTCAAACTCAGGAGAAATCAAATCAACGCAGTT
TTCTTTTGATTCAAACAATTTTTCTTGCAATTAAGCATTGGACCATACTCTGAATTCCTCTGACCATTGTTCTTGGCGCTTCTTTCTTCTTTAATGGCGTCCTGTAGTTT
GAGAACTGCAGATTTTAAGGTCTCAATGTTGGATGTTAGTAGGGGAAGAGTCTCTACATTGCCACCTTGTAGCTTGAGAAATTGGATAAGCAGGACACCGCCGTGATATT
CGAGTTTGATGATATCGTATTCGTCTCGAAAATCTTTGCGTGCTTGTTGTAGCGGATCGCCTGATACCCAGACCATAACCAGTTCAGAAACTGATTCTGAAGAAACAAAA
AAGCCTTTCAGTTTGACAAGCCAAGCTATCCCAAATTTTCATGAGGTTGAAACCCTGCTCACAAGCATATGTGACACATCTTCCATTGCAGAGTTTGAAATGAAAATAAC
CATGAACACAAAGTTGGATTGTTATGTTACATTTTGGTTAATTGTCCTTGTTGTACTGAACAGATTGCATTCACATAAAGCTTACCGTTCTGGAGAAGTCGTGAAGATAC
TGCGAAAAGACGGCGGTAAGTCGGTTTTCGACGTTTTTTTCCCTTCAATATTGTTGAGTTTTGATCAATTATAGCTTATCAGTTCACCATTTTTATGACAGAGCCTGTTG
GATATGGTGATGCTGTCATTGCTGTTCTACTTTCAGTACTAGGCTCAAGATAGTTAATCTTTTGAACTAGCCTTCTTCAGTTTTGAATAAACTGATCTCTTTTTTCTTTT
CTTTTTTGTTTGAGATCAGTTGTGTTTAATTTTTAATATATTTTTTAAAGTACTATTAAGAGGTTTTTGTTTTGAGATTTCAAATAATTGGAGGTAGGGGACTCAAAAAC
ACGACCTTTTGATTATTAAGTACATATTGATGTCGTTGAACTACTTCTCTTATTGATGGTATTTATAGGGGTTGAATTTCACATTGAAAATAGTTTTTTTTTGTCATTTT
TAAATAAATGAGAGTCAAATATCAATTTTTAAATTCGAAGCCGTAGATGTAATGTTTAATTAAATTACCATCAAATAATAAAATTAGC
Protein sequenceShow/hide protein sequence
MISYSSRKSLRACCSGSPDTQTITSSETDSEETKKPFSLTSQAIPNFHEVETLLTSICDTSSIAEFEMKITMNTKLDCYVTFWLIVLVVLNRLHSHKAYRSGEVVKILRK
DGGKSVFDVFFPSILLSFDQL