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Sed0021144 (gene) of Chayote v1 genome

Gene IDSed0021144
OrganismSechium edule (Chayote v1)
DescriptionDUF1279 domain-containing protein
Genome locationLG12:32722406..32723039
RNA-Seq ExpressionSed0021144
SyntenySed0021144
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009688 - Protein FAM210A/B-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604946.1 hypothetical protein SDJN03_02263, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2690.14Show/hide
Query:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
        MAFF+GGGRF ELLR Y KVAIGVHFSVSAASITGLYVAIKNN+DVESLL+KLHMDGFSSKD PQTSPSEI
Subjt:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
XP_022947464.1 uncharacterized protein LOC111451320 [Cucurbita moschata]1.6e-2691.55Show/hide
Query:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
        MAFF+GGGRF ELLR Y KVAIGVHFSVSAASITGLYVAIKNNVDVESLL+KLHMDGFSSKD PQTSPSEI
Subjt:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
XP_022971121.1 uncharacterized protein LOC111469888 [Cucurbita maxima]1.6e-2691.55Show/hide
Query:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
        MAFF+GGGRF ELLR Y KVAIGVHFSVSAASITGLYVAIKNNVDVESLL+KLHMDGFSSKD PQTSPSEI
Subjt:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
XP_023533856.1 uncharacterized protein LOC111795580 [Cucurbita pepo subsp. pepo]3.5e-2690.14Show/hide
Query:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
        MAFF+GGGRF ELLR Y KVAIGVHFSVS+ASITGLYVAIKNNVDVESLL+KLHMDGFSSKD PQTSPSEI
Subjt:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
XP_038902628.1 uncharacterized protein LOC120089278 [Benincasa hispida]3.5e-2690.14Show/hide
Query:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
        MAFF+GGGRF ELLR Y KVAIGVHFSVSAASITGLYVAIKNNVDVESLL+KLHMDGF SKDQPQT+PSEI
Subjt:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
TrEMBL top hitse value%identityAlignment
A0A6J1CXM4 uncharacterized protein LOC1110153792.2e-2691.43Show/hide
Query:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSE
        MAFF+GGGRF ELLR Y KVAIGVHFSVSAASITGLYVAIKNNVDVESLL+KLHMDGFSSKDQPQT PSE
Subjt:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSE
A0A6J1FU56 uncharacterized protein LOC1114484541.4e-2582.89Show/hide
Query:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEIQVVGE
        MAFF+GGGRF ELL+ Y KVAIGVHFSVSAASITGLYVAIKNNVDVESLL+KLHMDGFSSKDQ QTSP +  V+ E
Subjt:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEIQVVGE
A0A6J1G6W3 uncharacterized protein LOC1114513207.6e-2791.55Show/hide
Query:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
        MAFF+GGGRF ELLR Y KVAIGVHFSVSAASITGLYVAIKNNVDVESLL+KLHMDGFSSKD PQTSPSEI
Subjt:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
A0A6J1I2F7 uncharacterized protein LOC1114698887.6e-2791.55Show/hide
Query:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
        MAFF+GGGRF ELLR Y KVAIGVHFSVSAASITGLYVAIKNNVDVESLL+KLHMDGFSSKD PQTSPSEI
Subjt:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEI
A0A6J1JD52 uncharacterized protein LOC1114839512.4e-2588.57Show/hide
Query:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSE
        MAFF+GGGRF ELL+ Y KVAIGVHFSVSAASITGLYVAIKNNVDVESLL+KLHMDGFSSKDQ QTSP E
Subjt:  MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20940.1 Protein of unknown function (DUF1279)6.6e-1562.71Show/hide
Query:  RFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTS
        R  E+++ Y KVA+GVHFSVS  SI+G Y+AIKNNVDVESLLEK  +  FSSK+ P  S
Subjt:  RFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCTTCTCCGGCGGCGGCCGATTCCTCGAGCTTCTCAGGAACTACAGCAAGGTCGCAATCGGAGTTCATTTCTCAGTCTCGGCGGCTTCGATCACCGGCCTCTA
CGTCGCAATCAAGAACAATGTCGATGTTGAATCGCTTCTTGAGAAGCTCCACATGGATGGATTCTCCTCCAAAGATCAGCCGCAGACGAGTCCTTCTGAAATCCAGGTGG
TCGGTGAAATTGCAGTTCATCGGAGACTTCTGCGGCTCAACTGCTGCTCTGCATAA
mRNA sequenceShow/hide mRNA sequence
TCAATTTCGACTCCAAAGCACAAAAAAGCCCTAAAATCAAATCATTGTCAATTCCAGTTGCTTCGAAACCCTAGCCGCGGCCCTGCACCGCCAAGTTTCCGACTCGCCGC
CTCTCTTTCATCCATGGCTTTCTTCTCCGGCGGCGGCCGATTCCTCGAGCTTCTCAGGAACTACAGCAAGGTCGCAATCGGAGTTCATTTCTCAGTCTCGGCGGCTTCGA
TCACCGGCCTCTACGTCGCAATCAAGAACAATGTCGATGTTGAATCGCTTCTTGAGAAGCTCCACATGGATGGATTCTCCTCCAAAGATCAGCCGCAGACGAGTCCTTCT
GAAATCCAGGTGGTCGGTGAAATTGCAGTTCATCGGAGACTTCTGCGGCTCAACTGCTGCTCTGCATAATCGAAGTGCAGTGTTGTCAGATTAACACAGACTGCTGCTCT
GCTCTGATAGGGTTTTATTCTCCATGCCTTTTCATCTTTCAAGTCCAAAATGAAAAGGTATGCTGTATCTCAACTCATTTA
Protein sequenceShow/hide protein sequence
MAFFSGGGRFLELLRNYSKVAIGVHFSVSAASITGLYVAIKNNVDVESLLEKLHMDGFSSKDQPQTSPSEIQVVGEIAVHRRLLRLNCCSA