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Sed0021183 (gene) of Chayote v1 genome

Gene IDSed0021183
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein S23-1
Genome locationLG03:46404947..46407576
RNA-Seq ExpressionSed0021183
SyntenySed0021183
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156333.1 uncharacterized protein LOC111023254 [Momordica charantia]8.7e-4794.95Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRRILGFSDGE+MRSDA PC QLM+QTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDKRKVVR
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_022937466.1 uncharacterized protein LOC111443868 [Cucurbita moschata]9.6e-4692.93Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGELMRSDAKPCSQLM+QTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK +  R
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_022969628.1 uncharacterized protein LOC111468599 [Cucurbita maxima]3.3e-4693.94Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGELMRSDAKPCSQLM+QTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_023538321.1 uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]7.3e-4692.93Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDG+LMRSDAKPCSQLM+QTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_038889141.1 uncharacterized protein LOC120079031 [Benincasa hispida]1.0e-4795.96Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR LGFSDGE+MRSDAKPCSQLM+QTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVV+
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR

TrEMBL top hitse value%identityAlignment
A0A1S3BWM4 uncharacterized protein LOC1034939372.2e-4388.66Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR+LGFSDGE+MRSDAKPCSQLM+QTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

A0A5D3BBN9 40S ribosomal protein S23-12.2e-4388.66Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR+LGFSDGE+MRSDAKPCSQLM+QTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKV

A0A6J1DQC3 uncharacterized protein LOC1110232544.2e-4794.95Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRRILGFSDGE+MRSDA PC QLM+QTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDKRKVVR
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR

A0A6J1FAF1 uncharacterized protein LOC1114438684.6e-4692.93Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGELMRSDAKPCSQLM+QTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK +  R
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR

A0A6J1I1J3 uncharacterized protein LOC1114685991.6e-4693.94Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGELMRSDAKPCSQLM+QTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G57540.1 unknown protein3.8e-4077.08Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LM+QTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.2 unknown protein3.8e-4077.08Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LM+QTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.3 unknown protein3.8e-4077.08Show/hide
Query:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LM+QTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTAGACGAATCTTAGGTTTTTCAGATGGGGAGCTGATGAGATCAGATGCTAAGCCGTGTTCTCAGTTGATGAGACAAACCGCTGGGTTATGTACTGTTGGAGG
AGGACTTGCATTCTGGATTCTCTGTAGATTACACTATGGTCCAAGAATTACAGTTCCTAGGAGCCTTCGTTGGGCAGCGTGTGGAGCGGCATCAATGAGTGCAACGTCGG
CCTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAACATTGCTGCTTATGACAAAAGAAAAGTTGTGAGGTAA
mRNA sequenceShow/hide mRNA sequence
CAACAAAGCCCTTGCCGCCTCTGTCATTAACCCTTCTTTTCTTCTTTTCAATTTCATTTTTGTTTCTTTTTTTATTGTTTCGTTTCTCCGGCGGTATTCCACTTCCGACG
CCGACATTCTTTTCCGGCGATCTCCTCCAATCTGAAATTAGCAAGATGGCACTTAGACGAATCTTAGGTTTTTCAGATGGGGAGCTGATGAGATCAGATGCTAAGCCGTG
TTCTCAGTTGATGAGACAAACCGCTGGGTTATGTACTGTTGGAGGAGGACTTGCATTCTGGATTCTCTGTAGATTACACTATGGTCCAAGAATTACAGTTCCTAGGAGCC
TTCGTTGGGCAGCGTGTGGAGCGGCATCAATGAGTGCAACGTCGGCCTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAACATTGCTGCTTATGACAAAAGA
AAAGTTGTGAGGTAATTAATTGACTTTCATAGTTCAATGATCCTACTGTATTATTGAATGTTGTTATTCAGATGTTTCTTTATAGGAGATTAAGTTGTGTTGTTATGATC
AAGTCTCTGGCTTTTGACTCAAAGCTGAAGAGAAATTGTTGGAGGGATTTTTTTTTCCTTTTTTTTCTTTTTTCTTTAAAGTGTGACTATAGTTTTAGATATATGAGAGA
AATTGAAAAATGTATTTTGAATTTGTAATTGATGTTATCAGATTACTTGCAGATTTTGAATCTAAAGGAGTTGTTATCTCTCCCCAAGGGGTGGCGTTGTA
Protein sequenceShow/hide protein sequence
MALRRILGFSDGELMRSDAKPCSQLMRQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKVVR