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Sed0021186 (gene) of Chayote v1 genome

Gene IDSed0021186
OrganismSechium edule (Chayote v1)
DescriptionDynein light chain
Genome locationLG04:42233572..42235392
RNA-Seq ExpressionSed0021186
SyntenySed0021186
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607846.1 hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sororia]7.9e-4482.88Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP
        MLEGKAIVGETDMLQ+MQQDALDLAAKALD FDVT+ TDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS  P+    P
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP

Query:  TQFAANLETLK
        T F A+ ETLK
Subjt:  TQFAANLETLK

XP_022139644.1 dynein light chain LC6, flagellar outer arm [Momordica charantia]2.5e-4585.59Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP
        MLEGKAI+GETDMLQ MQQDALDLAAKALD+FDVT+ TDIARFIKKEFDRI+G GWQCIVGTDFGSFVTHCFGCFIYFCVG+LAVLLFRGSAGP+ QT P
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP

Query:  TQFAANLETLK
        T   A LE LK
Subjt:  TQFAANLETLK

XP_022941140.1 dynein light chain 2, cytoplasmic-like [Cucurbita moschata]2.1e-4483.78Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP
        MLEGKAIVGETDMLQ+MQQDALDLAAKALD FDVT+ TDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS  P+    P
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP

Query:  TQFAANLETLK
        T FAA+ ETLK
Subjt:  TQFAANLETLK

XP_022981659.1 dynein light chain 2, cytoplasmic-like [Cucurbita maxima]1.0e-4382.88Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP
        MLEGKAIVGETDMLQ+MQQDALDLAAKALD FDVT+ TDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS  P+    P
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP

Query:  TQFAANLETLK
        T  AA+ ETLK
Subjt:  TQFAANLETLK

XP_038899068.1 dynein light chain 2, cytoplasmic [Benincasa hispida]7.9e-4482.3Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAG--PEHQT
        MLEGKAI+GETDMLQ+MQQDAL+LAAKALD+FDVT+ TDIARFIKKEFD+IYG GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSA    E Q 
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAG--PEHQT

Query:  APTQFAANLETLK
         PTQF+  +ETLK
Subjt:  APTQFAANLETLK

TrEMBL top hitse value%identityAlignment
A0A059BVC4 Uncharacterized protein7.2e-4379.82Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP
        MLEGKA++GETDMLQ+MQQ+AL LA+KALD+FDVT+PTDIARFIK EFDRIYG GWQCIVGTDFGSFVTHC GCFIYFCVGSLA+LLFRGS+GPE +  P
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP

Query:  TQFAANLET
         QF   L+T
Subjt:  TQFAANLET

A0A6J1CDL8 Dynein light chain1.2e-4585.59Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP
        MLEGKAI+GETDMLQ MQQDALDLAAKALD+FDVT+ TDIARFIKKEFDRI+G GWQCIVGTDFGSFVTHCFGCFIYFCVG+LAVLLFRGSAGP+ QT P
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP

Query:  TQFAANLETLK
        T   A LE LK
Subjt:  TQFAANLETLK

A0A6J1FSQ1 Dynein light chain1.0e-4483.78Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP
        MLEGKAIVGETDMLQ+MQQDALDLAAKALD FDVT+ TDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS  P+    P
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP

Query:  TQFAANLETLK
        T FAA+ ETLK
Subjt:  TQFAANLETLK

A0A6J1IHC9 Dynein light chain9.4e-4381.08Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP
        MLEGKA++GETDMLQ+MQQ+ALDLAAKALD+FDVT+PTDIARFIKKEFD +YG GWQCIVGTDFGSFVTHC GCFIYFCVGSLAVLLF+GS+G E +  P
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP

Query:  TQFAANLETLK
        TQF+  LET+K
Subjt:  TQFAANLETLK

A0A6J1J2G7 Dynein light chain5.0e-4482.88Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP
        MLEGKAIVGETDMLQ+MQQDALDLAAKALD FDVT+ TDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS  P+    P
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAP

Query:  TQFAANLETLK
        T  AA+ ETLK
Subjt:  TQFAANLETLK

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm4.5e-1852.81Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        M E KA++   DM + MQQDA+D A +AL+ F++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +AVLLF+
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

O96860 Dynein light chain 2, cytoplasmic1.0e-1750.56Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        M + KA++   DM + MQQDA+D A +AL+ +++ +  DIA FIKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

Q22799 Dynein light chain 1, cytoplasmic1.3e-1749.44Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        M++ KA++   DM   MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

Q24117 Dynein light chain 1, cytoplasmic2.3e-1749.44Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        M + KA++   DM + MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

Q3MHR3 Dynein light chain 2, cytoplasmic3.8e-1748.31Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        M + KA++   DM + MQQDA+D A +A++ +++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 116.9e-2253.19Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGP
        MLEGKA+V ++DM   MQ  A+  A++ALD FDV     IA  IKKEFD  YG GWQC+VG++FG F TH  G FIYF + +L  L+F+G++ P
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGP

AT3G16120.1 Dynein light chain type 1 family protein3.7e-2357.14Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGS
        MLEGKA V ETDM   MQ  A+ +A+++LD FDV     IA  IKKEFD  YG GWQC+VGT+FG F TH  G FIYF +G+L  L+F+G+
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGS

AT4G15930.1 Dynein light chain type 1 family protein1.1e-1444.71Show/hide
Query:  KAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        +A++   DM   MQ++A+++A  A + + V +  DIA  IKKEFD+ +G  W CIVG +FGS+VTH    F+YF +   AVLLF+
Subjt:  KAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

AT4G27360.1 Dynein light chain type 1 family protein1.2e-3776.34Show/hide
Query:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAG
        MLEGKA++G+TDM Q+M++DAL LA+KALD FDVT+PT IARFIKKEFDR YG GWQCIVGT FGSFVTHC GCFI+F VGSL +LLF+GS G
Subjt:  MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAG

AT5G20110.1 Dynein light chain type 1 family protein1.1e-1448.19Show/hide
Query:  DMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGP
        DM   MQ  A   A   LD+ +      +A  +KKEFD+ YG  W CIVG+ FGSFVTH  GCFIYF +  L VLLF+    P
Subjt:  DMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGGAAAGCAATCGTGGGAGAGACGGATATGCTGCAGAGCATGCAACAGGACGCTCTGGACCTTGCGGCTAAGGCACTTGACACTTTTGATGTCACTCAACC
CACTGACATCGCTCGCTTCATTAAGAAGGAATTTGACAGGATCTATGGGCAAGGATGGCAATGCATAGTGGGGACAGATTTTGGGTCATTTGTGACACATTGCTTTGGAT
GTTTCATCTACTTTTGTGTTGGAAGCCTTGCAGTTTTGCTCTTTAGGGGCTCTGCTGGCCCAGAACACCAAACTGCCCCAACCCAATTTGCTGCTAATTTGGAAACTCTC
AAACCCATCATGTAA
mRNA sequenceShow/hide mRNA sequence
GCAGCCGCCGCCGCCATCGAGCCGTCGTGTTGGAACCATGTTGGAAGGGAAAGCAATCGTGGGAGAGACGGATATGCTGCAGAGCATGCAACAGGACGCTCTGGACCTTG
CGGCTAAGGCACTTGACACTTTTGATGTCACTCAACCCACTGACATCGCTCGCTTCATTAAGAAGGAATTTGACAGGATCTATGGGCAAGGATGGCAATGCATAGTGGGG
ACAGATTTTGGGTCATTTGTGACACATTGCTTTGGATGTTTCATCTACTTTTGTGTTGGAAGCCTTGCAGTTTTGCTCTTTAGGGGCTCTGCTGGCCCAGAACACCAAAC
TGCCCCAACCCAATTTGCTGCTAATTTGGAAACTCTCAAACCCATCATGTAATCATCAACCCAAATCCAATCCTTCCCTTTACTATTCTCTGAACTAAACACTGATCATA
TATAGTTTGAAGAAACAAAGCTATATATATATATTTTACTG
Protein sequenceShow/hide protein sequence
MLEGKAIVGETDMLQSMQQDALDLAAKALDTFDVTQPTDIARFIKKEFDRIYGQGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAGPEHQTAPTQFAANLETL
KPIM