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Sed0021195 (gene) of Chayote v1 genome

Gene IDSed0021195
OrganismSechium edule (Chayote v1)
Descriptionzinc finger protein 830-like isoform X1
Genome locationLG11:4393262..4394970
RNA-Seq ExpressionSed0021195
SyntenySed0021195
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586051.1 Signal recognition particle receptor subunit alpha-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3351.47Show/hide
Query:  MEFKFRAGDLRPSPPPPPPPPPPRSDSP-GPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERERFLKEEARKKLRL
        MEF+FRAGD R    PPPP P  +  SP  PP  H LSKQGF DA L+ +TNI      FD +EAMHCEMELMRLR+EKLL+EIER++FLKE+AR++L L
Subjt:  MEFKFRAGDLRPSPPPPPPPPPPRSDSP-GPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERERFLKEEARKKLRL

Query:  FEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADVNKEPQVLHAVKS
        FEREMAIR      GY     NRW    S   +P        L +SA    SS  +  P++E L+SS+ + FG V LPPRVQPL+AD   E Q+L   + 
Subjt:  FEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADVNKEPQVLHAVKS

Query:  ELMV
        EL++
Subjt:  ELMV

KAG6599144.1 hypothetical protein SDJN03_08922, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3346.67Show/hide
Query:  MEFKFRAGDLRPSPPPP----------------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEK
        MEFKFRAGD R SPPPP                      PP PP +   P PP    L KQGFPDA L   TN+ T+   FD NE MHCEMELMRLR+EK
Subjt:  MEFKFRAGDLRPSPPPP----------------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEK

Query:  LLMEIERERFLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPP
        L++EIER+RFL+E+AR++L LFERE AIR VAQS GY L     W G+      PSL+   A +          S     R++  KSS  + FG  +LPP
Subjt:  LLMEIERERFLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPP

Query:  RVQPLIADVNKEPQVLHAVKSELMV
        RVQP +A+  +E QVL   +++L+V
Subjt:  RVQPLIADVNKEPQVLHAVKSELMV

XP_022969583.1 uncharacterized protein LOC111468562 [Cucurbita maxima]1.0e-3351.23Show/hide
Query:  MEFKFRAGDLRPSPPPPPPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERERFLKEEARKKLRLF
        MEF+FRAGD R    PPPP P  +  SP PP  H LSKQGF DA L+ +TNI      FD +E MHCEMELMRLR+EKLL+EIER++FLKE+AR++L LF
Subjt:  MEFKFRAGDLRPSPPPPPPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERERFLKEEARKKLRLF

Query:  EREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADVNKEPQVLHAVKSE
        EREMAIR      GY     NRW    S   +P        L +SA    SS  +  P++E L+SS+ + FG   LPPRVQPL+AD   E QVL   + E
Subjt:  EREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADVNKEPQVLHAVKSE

Query:  LMV
        L++
Subjt:  LMV

XP_022999649.1 zinc finger protein 830-like isoform X2 [Cucurbita maxima]6.6e-3347.22Show/hide
Query:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER
        MEFKFRAGD R SPPPP             PP PP +   P PP    L KQGFPDA L   TN+ T+   FD NE MHCEMELMRLR+EKL++EIER+R
Subjt:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER

Query:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV
        FL+E+AR++L LFERE AI  VAQS GY L     W G+      PSL+   A +          S     R++  KSS  + FG  +LPPR+QP +A+ 
Subjt:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV

Query:  NKEPQVLHAVKSELMV
         +E QV+   +++L+V
Subjt:  NKEPQVLHAVKSELMV

XP_022999652.1 zinc finger protein 830-like isoform X4 [Cucurbita maxima]6.6e-3347.22Show/hide
Query:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER
        MEFKFRAGD R SPPPP             PP PP +   P PP    L KQGFPDA L   TN+ T+   FD NE MHCEMELMRLR+EKL++EIER+R
Subjt:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER

Query:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV
        FL+E+AR++L LFERE AI  VAQS GY L     W G+      PSL+   A +          S     R++  KSS  + FG  +LPPR+QP +A+ 
Subjt:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV

Query:  NKEPQVLHAVKSELMV
         +E QV+   +++L+V
Subjt:  NKEPQVLHAVKSELMV

TrEMBL top hitse value%identityAlignment
A0A6J1I1E4 uncharacterized protein LOC1114685624.9e-3451.23Show/hide
Query:  MEFKFRAGDLRPSPPPPPPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERERFLKEEARKKLRLF
        MEF+FRAGD R    PPPP P  +  SP PP  H LSKQGF DA L+ +TNI      FD +E MHCEMELMRLR+EKLL+EIER++FLKE+AR++L LF
Subjt:  MEFKFRAGDLRPSPPPPPPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERERFLKEEARKKLRLF

Query:  EREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADVNKEPQVLHAVKSE
        EREMAIR      GY     NRW    S   +P        L +SA    SS  +  P++E L+SS+ + FG   LPPRVQPL+AD   E QVL   + E
Subjt:  EREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADVNKEPQVLHAVKSE

Query:  LMV
        L++
Subjt:  LMV

A0A6J1KBF0 zinc finger protein 830-like isoform X43.2e-3347.22Show/hide
Query:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER
        MEFKFRAGD R SPPPP             PP PP +   P PP    L KQGFPDA L   TN+ T+   FD NE MHCEMELMRLR+EKL++EIER+R
Subjt:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER

Query:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV
        FL+E+AR++L LFERE AI  VAQS GY L     W G+      PSL+   A +          S     R++  KSS  + FG  +LPPR+QP +A+ 
Subjt:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV

Query:  NKEPQVLHAVKSELMV
         +E QV+   +++L+V
Subjt:  NKEPQVLHAVKSELMV

A0A6J1KDP5 zinc finger protein 830-like isoform X33.2e-3347.22Show/hide
Query:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER
        MEFKFRAGD R SPPPP             PP PP +   P PP    L KQGFPDA L   TN+ T+   FD NE MHCEMELMRLR+EKL++EIER+R
Subjt:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER

Query:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV
        FL+E+AR++L LFERE AI  VAQS GY L     W G+      PSL+   A +          S     R++  KSS  + FG  +LPPR+QP +A+ 
Subjt:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV

Query:  NKEPQVLHAVKSELMV
         +E QV+   +++L+V
Subjt:  NKEPQVLHAVKSELMV

A0A6J1KKC7 zinc finger protein 830-like isoform X13.2e-3347.22Show/hide
Query:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER
        MEFKFRAGD R SPPPP             PP PP +   P PP    L KQGFPDA L   TN+ T+   FD NE MHCEMELMRLR+EKL++EIER+R
Subjt:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER

Query:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV
        FL+E+AR++L LFERE AI  VAQS GY L     W G+      PSL+   A +          S     R++  KSS  + FG  +LPPR+QP +A+ 
Subjt:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV

Query:  NKEPQVLHAVKSELMV
         +E QV+   +++L+V
Subjt:  NKEPQVLHAVKSELMV

A0A6J1KKD2 myb-like protein D isoform X53.2e-3347.22Show/hide
Query:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER
        MEFKFRAGD R SPPPP             PP PP +   P PP    L KQGFPDA L   TN+ T+   FD NE MHCEMELMRLR+EKL++EIER+R
Subjt:  MEFKFRAGDLRPSPPPP-------------PPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERER

Query:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV
        FL+E+AR++L LFERE AI  VAQS GY L     W G+      PSL+   A +          S     R++  KSS  + FG  +LPPR+QP +A+ 
Subjt:  FLKEEARKKLRLFEREMAIRGVAQSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADV

Query:  NKEPQVLHAVKSELMV
         +E QV+   +++L+V
Subjt:  NKEPQVLHAVKSELMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCAAGTTTCGTGCCGGCGATCTCCGACCATCGCCGCCGCCACCACCGCCGCCGCCGCCTCCGAGGTCTGATTCTCCTGGGCCGCCGGAATTTCATTATTTATC
TAAGCAAGGATTTCCAGATGCCTCTCTAAAACTAAACACAAACATCCGAACAATGGGAAATTCGTTTGATAACAACGAGGCGATGCATTGCGAGATGGAGTTGATGCGAT
TGAGAGAAGAGAAATTGTTGATGGAGATTGAAAGGGAGCGATTTTTGAAAGAAGAAGCAAGAAAAAAATTGAGGTTGTTTGAACGAGAAATGGCAATTAGAGGAGTTGCG
CAGTCGACTGGCTATTCTTTACTTGACCAAAATCGATGGGCAGGGCTGTCAAGCACAACGCCGTCCCCATCTCTTGCTTGGGGAGTTGCTCAGTTGTGCACTAGCGCTGC
GCAAGCAACATCGTCATCCCTGTCTCCAGCTCCAAGAATTGAACATTTGAAAAGTTCCAACCCCATTAGGTTTGGTGTTGTTTCGTTGCCGCCCCGGGTTCAGCCTTTAA
TAGCTGATGTTAACAAGGAGCCTCAAGTATTGCATGCTGTTAAAAGTGAACTCATGGTATGGTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTCAAGTTTCGTGCCGGCGATCTCCGACCATCGCCGCCGCCACCACCGCCGCCGCCGCCTCCGAGGTCTGATTCTCCTGGGCCGCCGGAATTTCATTATTTATC
TAAGCAAGGATTTCCAGATGCCTCTCTAAAACTAAACACAAACATCCGAACAATGGGAAATTCGTTTGATAACAACGAGGCGATGCATTGCGAGATGGAGTTGATGCGAT
TGAGAGAAGAGAAATTGTTGATGGAGATTGAAAGGGAGCGATTTTTGAAAGAAGAAGCAAGAAAAAAATTGAGGTTGTTTGAACGAGAAATGGCAATTAGAGGAGTTGCG
CAGTCGACTGGCTATTCTTTACTTGACCAAAATCGATGGGCAGGGCTGTCAAGCACAACGCCGTCCCCATCTCTTGCTTGGGGAGTTGCTCAGTTGTGCACTAGCGCTGC
GCAAGCAACATCGTCATCCCTGTCTCCAGCTCCAAGAATTGAACATTTGAAAAGTTCCAACCCCATTAGGTTTGGTGTTGTTTCGTTGCCGCCCCGGGTTCAGCCTTTAA
TAGCTGATGTTAACAAGGAGCCTCAAGTATTGCATGCTGTTAAAAGTGAACTCATGGTATGGTACTAG
Protein sequenceShow/hide protein sequence
MEFKFRAGDLRPSPPPPPPPPPPRSDSPGPPEFHYLSKQGFPDASLKLNTNIRTMGNSFDNNEAMHCEMELMRLREEKLLMEIERERFLKEEARKKLRLFEREMAIRGVA
QSTGYSLLDQNRWAGLSSTTPSPSLAWGVAQLCTSAAQATSSSLSPAPRIEHLKSSNPIRFGVVSLPPRVQPLIADVNKEPQVLHAVKSELMVWY