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Sed0021240 (gene) of Chayote v1 genome

Gene IDSed0021240
OrganismSechium edule (Chayote v1)
DescriptionPre T-cell antigen receptor alpha
Genome locationLG08:2645422..2648013
RNA-Seq ExpressionSed0021240
SyntenySed0021240
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OIW03086.1 hypothetical protein TanjilG_07238 [Lupinus angustifolius]1.1e-2786.76Show/hide
Query:  GGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKF
        GG+ V KNKHIEDW TARENLELNFRWTRRN AL GIFGIA+PYLVYKG+VREFHMQDED GRPYRKF
Subjt:  GGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKF
XP_008453524.1 PREDICTED: uncharacterized protein LOC103494207 [Cucumis melo]7.0e-3090Show/hide
Query:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
        GGG+G +KNK IEDWSTARENLE NFRWTRRN A+VGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
Subjt:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
XP_011649322.1 uncharacterized protein LOC101206025 [Cucumis sativus]1.6e-2990Show/hide
Query:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
        GGG+  +KNK IEDWSTARENLELNFRWTRRN A+VGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
Subjt:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
XP_022921830.1 uncharacterized protein LOC111429971 [Cucurbita moschata]5.0e-2887.14Show/hide
Query:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
        GGG+  +KNK IEDWS+ARENLE NFRWTRRNFALVG+FGIAVP LVYKGIVREFHMQDEDAGRPYRKFF
Subjt:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
XP_038878542.1 uncharacterized protein LOC120070743 [Benincasa hispida]6.6e-2885.71Show/hide
Query:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
        GGG+  +KN+ IEDWSTARENLE NFRWTRRNFA+VG+FGIAVP LVYKGIVREFHMQDEDAGRPYRKFF
Subjt:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
TrEMBL top hitse value%identityAlignment
A0A0A0LPS8 Uncharacterized protein7.5e-3090Show/hide
Query:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
        GGG+  +KNK IEDWSTARENLELNFRWTRRN A+VGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
Subjt:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
A0A1J7GRK7 Uncharacterized protein5.4e-2886.76Show/hide
Query:  GGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKF
        GG+ V KNKHIEDW TARENLELNFRWTRRN AL GIFGIA+PYLVYKG+VREFHMQDED GRPYRKF
Subjt:  GGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKF
A0A1S3BVW2 uncharacterized protein LOC1034942073.4e-3090Show/hide
Query:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
        GGG+G +KNK IEDWSTARENLE NFRWTRRN A+VGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
Subjt:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
A0A6J1E6W7 uncharacterized protein LOC1114299712.4e-2887.14Show/hide
Query:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
        GGG+  +KNK IEDWS+ARENLE NFRWTRRNFALVG+FGIAVP LVYKGIVREFHMQDEDAGRPYRKFF
Subjt:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
A0A6J1JDA5 uncharacterized protein LOC1114857485.4e-2885.71Show/hide
Query:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
        GGG+  +KN+ IEDWS+ARENLE NFRWTRRNFALVG+FGIAVP LVYKGIVREFHMQDEDAGRPYRKFF
Subjt:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31490.1 unknown protein9.7e-3079.71Show/hide
Query:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKF
        GGG+  NKNK IEDW +ARENLE NFRWTRRNFAL+GIFGIA+P +VYKGIV++FHMQDEDAGRP+RKF
Subjt:  GGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTGGAGGATTGGGAGTTAACAAGAACAAACACATCGAGGATTGGAGCACTGCTCGAGAAAATCTTGAGCTTAATTTCCGCTGGACTCGCCGCAATTTCGCCCT
TGTGGGAATCTTCGGCATCGCCGTTCCCTACCTCGTTTACAAAGGAATCGTTAGGGAATTTCATATGCAAGATGAGGATGCAGGCAGACCTTACAGAAAGTTCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATTCTTATGAAATTTCCCAAAACATTTAATTTCAAAAGAAAAAAAAAGAGTTTGTATATATAAAGGATAGGGAAAAAATCTCAGGTCAAAGTGAAGAAACCGACGAGGGG
CAAACTAGTGAGAGAGCGAAGGAGTTTGGGAGAAGAGAAGAAATTCGCAGAGAGCGACAATGGCCGGTGGAGGATTGGGAGTTAACAAGAACAAACACATCGAGGATTGG
AGCACTGCTCGAGAAAATCTTGAGCTTAATTTCCGCTGGACTCGCCGCAATTTCGCCCTTGTGGGAATCTTCGGCATCGCCGTTCCCTACCTCGTTTACAAAGGAATCGT
TAGGGAATTTCATATGCAAGATGAGGATGCAGGCAGACCTTACAGAAAGTTCTTTTGAGCACTGGATCAGGCACACTGCATTACTTCCTTTTGAGTAATAAAACCTTTCT
TATCTATGTAAGCATTGAACCCCTTGAATTTGGATTCTGGGACAATATTGCATCTTTCCTTGAAGTTGTAGAAGTGATGCTATGCAATTACACTGTATTTCATGTCATTT
CGTGAGTGCTGATGATTAATTTCTGTCGAAGTCATGCCTCCTTTCAAATATATTATGAATATAGACCAATTTTTGCT
Protein sequenceShow/hide protein sequence
MAGGGLGVNKNKHIEDWSTARENLELNFRWTRRNFALVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF