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Sed0021245 (gene) of Chayote v1 genome

Gene IDSed0021245
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG05:31954328..31955109
RNA-Seq ExpressionSed0021245
SyntenySed0021245
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008447121.1 PREDICTED: uncharacterized protein LOC103489644 [Cucumis melo]8.2e-9490.05Show/hide
Query:  DDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLCS
        D N+K LS    KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTA+LLLFNAS K F+  ACKRSWIPSLCS
Subjt:  DDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLCS

Query:  LLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLC
        LLFSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLL++CVDELKRKG+EFDLLKEVDALRRAKSLRVEAKAV KWSSRDFITLFFFSVSCMFLGVIR+VLC
Subjt:  LLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLC

Query:  N
        N
Subjt:  N
XP_022952110.1 uncharacterized protein LOC111454873 [Cucurbita moschata]9.7e-9590.59Show/hide
Query:  MDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLC
        MDDN+K LS    KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFF+FHSTAVLLLFNAS K F+  AC RSWIPSLC
Subjt:  MDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLC

Query:  SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVL
        SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLL +CVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAV KWSSRDFITLFFFSVSCMFLG+IR+VL
Subjt:  SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVL

Query:  CN
        CN
Subjt:  CN
XP_022968874.1 uncharacterized protein LOC111468053 [Cucurbita maxima]2.2e-9490.1Show/hide
Query:  MDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLC
        MDDN+K LS    KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFF+FHSTAVLLLFNAS K F+  AC RSWIPSLC
Subjt:  MDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLC

Query:  SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVL
        SLLFSLGIIWAVRYKTDLEAHL+KLLEREKEDRNLL +CVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAV KWSSRDFITLFFFSVSCMFLG+IR+VL
Subjt:  SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVL

Query:  CN
        CN
Subjt:  CN
XP_023553637.1 uncharacterized protein LOC111811128 [Cucurbita pepo subsp. pepo]3.4e-10080Show/hide
Query:  LFEIGPLQLFERKK-NQ--KPSFEIGFIFPHSLYLSSSHLSIPFLLSNLGFLSMDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRIS
        LF+I PLQLFE+KK NQ  +PS        H + LS S      L      +SMDDN+K LS    KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGRIS
Subjt:  LFEIGPLQLFERKK-NQ--KPSFEIGFIFPHSLYLSSSHLSIPFLLSNLGFLSMDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRIS

Query:  LKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKG
        LKETQIDSVRKEITMLHIFFF+FHSTAVLLLFNAS K F+  AC RSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLL +CVDELKRKG
Subjt:  LKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKG

Query:  VEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLCN
        VEFDLLKEVDALRRAKSLRVEAKAV KWSSRDFITLFFFSVSCMFLG+IR+VLCN
Subjt:  VEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLCN
XP_038888007.1 uncharacterized protein LOC120077946 [Benincasa hispida]6.3e-9489.11Show/hide
Query:  MDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLC
        MDDN+K LS    KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGRISLKETQIDSVR+EITMLHIFFFVFHSTA+LLLFNAS K F+  ACKRSWIPSLC
Subjt:  MDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLC

Query:  SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVL
        SLLFSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLL++CVDELKRKG+EFDLLKEVDALRRAKSLRVEAKAV KWSSRDFITLFFF VSCMFLG+IR+VL
Subjt:  SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVL

Query:  CN
        CN
Subjt:  CN
TrEMBL top hitse value%identityAlignment
A0A0A0K424 Uncharacterized protein5.2e-9489.55Show/hide
Query:  DDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLCS
        D N+K LS    KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTA+LLLFNAS K F+  ACKRSWIPSLCS
Subjt:  DDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLCS

Query:  LLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLC
        LLFSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLL++CVDELKRKG+EFDLLKEVDALRRAKSLRVEAKAV KWSSRDFITLFFFSVSCMFLG+IR+VLC
Subjt:  LLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLC

Query:  N
        N
Subjt:  N
A0A1S3BHA3 uncharacterized protein LOC1034896444.0e-9490.05Show/hide
Query:  DDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLCS
        D N+K LS    KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTA+LLLFNAS K F+  ACKRSWIPSLCS
Subjt:  DDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLCS

Query:  LLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLC
        LLFSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLL++CVDELKRKG+EFDLLKEVDALRRAKSLRVEAKAV KWSSRDFITLFFFSVSCMFLGVIR+VLC
Subjt:  LLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLC

Query:  N
        N
Subjt:  N
A0A5A7U7C4 Putative transmembrane protein4.0e-9490.05Show/hide
Query:  DDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLCS
        D N+K LS    KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTA+LLLFNAS K F+  ACKRSWIPSLCS
Subjt:  DDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLCS

Query:  LLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLC
        LLFSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLL++CVDELKRKG+EFDLLKEVDALRRAKSLRVEAKAV KWSSRDFITLFFFSVSCMFLGVIR+VLC
Subjt:  LLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLC

Query:  N
        N
Subjt:  N
A0A6J1GKU6 uncharacterized protein LOC1114548734.7e-9590.59Show/hide
Query:  MDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLC
        MDDN+K LS    KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFF+FHSTAVLLLFNAS K F+  AC RSWIPSLC
Subjt:  MDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLC

Query:  SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVL
        SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLL +CVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAV KWSSRDFITLFFFSVSCMFLG+IR+VL
Subjt:  SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVL

Query:  CN
        CN
Subjt:  CN
A0A6J1I0X4 uncharacterized protein LOC1114680531.0e-9490.1Show/hide
Query:  MDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLC
        MDDN+K LS    KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFF+FHSTAVLLLFNAS K F+  AC RSWIPSLC
Subjt:  MDDNHKTLS----KPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLC

Query:  SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVL
        SLLFSLGIIWAVRYKTDLEAHL+KLLEREKEDRNLL +CVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAV KWSSRDFITLFFFSVSCMFLG+IR+VL
Subjt:  SLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVL

Query:  CN
        CN
Subjt:  CN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12870.1 unknown protein9.7e-7773.58Show/hide
Query:  SKPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAA---ACKRSWIPSLCSLLFSLGII
        +K  HPLHQIA TPTHKLLLKQWLKEEELI  R+S KE+QIDSVR+EIT L+IFFF+FHS ++LLLF+AS+   ++A   ACKRSWIPSLC+LL SLGII
Subjt:  SKPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKGFNAA---ACKRSWIPSLCSLLFSLGII

Query:  WAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLCN
        WAVRYK+++E+HLEKLLEREKED  LL +CV+ELK+KG+EFDLLKEVDALRRAKSLRVE+K V KWS+RDF+TLFFFSVSC+ L +IR++LC+
Subjt:  WAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVTKWSSRDFITLFFFSVSCMFLGVIRIVLCN
AT5G56120.1 unknown protein1.0e-2537.7Show/hide
Query:  HPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKG-----FNAAACKRSWIPSLCSLLFSLGIIWA
        HPL +I+++P H LLLK W +EE+L   R+ LKE++++S+++EI  L  FF VFH     L++++S         + A CK+ WIPS  SL  SL +++ 
Subjt:  HPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITMLHIFFFVFHSTAVLLLFNASAKG-----FNAAACKRSWIPSLCSLLFSLGIIWA

Query:  VRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAK-AVTKWSSRDFITLFFFSVSCMFLGVIRIVLC
        V+ K  +   + + + RE+ D   L RCV EL+ KG  FDL KE  + +R KS  VE K     W S+  IT+     + +F  V + +LC
Subjt:  VRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAK-AVTKWSSRDFITLFFFSVSCMFLGVIRIVLC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTTGAGATCGGACCGTTACAATTATTTGAAAGAAAAAAAAATCAGAAACCCTCTTTTGAAATAGGCTTCATCTTCCCTCACTCACTGTATCTTTCAAGCTCTCA
TCTTTCCATTCCTTTCCTTCTTTCTAATTTGGGCTTTCTCTCCATGGATGATAACCACAAAACCTTATCAAAACCTTCACACCCACTTCACCAAATCGCCCAAACCCCAA
CCCACAAACTTCTTCTCAAGCAATGGCTCAAAGAAGAAGAACTCATCTTCGGCAGAATCTCCCTCAAAGAAACCCAAATCGACTCGGTCCGAAAGGAAATCACAATGCTT
CACATTTTCTTCTTCGTCTTCCACTCCACCGCGGTACTCCTCCTCTTCAACGCCTCGGCGAAGGGCTTCAACGCCGCAGCCTGCAAGAGATCATGGATTCCATCTCTCTG
TTCTCTGCTGTTCTCTCTAGGGATCATTTGGGCAGTCAGGTACAAGACTGATCTGGAGGCCCATTTGGAGAAATTGTTGGAAAGGGAAAAGGAAGATAGAAACTTGCTGG
CGAGGTGTGTTGATGAGTTGAAGAGAAAAGGGGTTGAATTTGATTTGTTGAAGGAGGTGGATGCGCTGCGGCGGGCGAAGAGCTTGCGGGTCGAAGCTAAGGCTGTCACA
AAATGGTCTTCAAGAGATTTCATCACTCTGTTTTTCTTCTCTGTTTCGTGTATGTTTCTTGGGGTTATTAGGATTGTTCTGTGTAATAAGTAG
mRNA sequenceShow/hide mRNA sequence
CTGAGGGGCATTTAAGGAAATTCAAATGCTTTTTGAGATCGGACCGTTACAATTATTTGAAAGAAAAAAAAATCAGAAACCCTCTTTTGAAATAGGCTTCATCTTCCCTC
ACTCACTGTATCTTTCAAGCTCTCATCTTTCCATTCCTTTCCTTCTTTCTAATTTGGGCTTTCTCTCCATGGATGATAACCACAAAACCTTATCAAAACCTTCACACCCA
CTTCACCAAATCGCCCAAACCCCAACCCACAAACTTCTTCTCAAGCAATGGCTCAAAGAAGAAGAACTCATCTTCGGCAGAATCTCCCTCAAAGAAACCCAAATCGACTC
GGTCCGAAAGGAAATCACAATGCTTCACATTTTCTTCTTCGTCTTCCACTCCACCGCGGTACTCCTCCTCTTCAACGCCTCGGCGAAGGGCTTCAACGCCGCAGCCTGCA
AGAGATCATGGATTCCATCTCTCTGTTCTCTGCTGTTCTCTCTAGGGATCATTTGGGCAGTCAGGTACAAGACTGATCTGGAGGCCCATTTGGAGAAATTGTTGGAAAGG
GAAAAGGAAGATAGAAACTTGCTGGCGAGGTGTGTTGATGAGTTGAAGAGAAAAGGGGTTGAATTTGATTTGTTGAAGGAGGTGGATGCGCTGCGGCGGGCGAAGAGCTT
GCGGGTCGAAGCTAAGGCTGTCACAAAATGGTCTTCAAGAGATTTCATCACTCTGTTTTTCTTCTCTGTTTCGTGTATGTTTCTTGGGGTTATTAGGATTGTTCTGTGTA
ATAAGTAGAGGG
Protein sequenceShow/hide protein sequence
MLFEIGPLQLFERKKNQKPSFEIGFIFPHSLYLSSSHLSIPFLLSNLGFLSMDDNHKTLSKPSHPLHQIAQTPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEITML
HIFFFVFHSTAVLLLFNASAKGFNAAACKRSWIPSLCSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLARCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVT
KWSSRDFITLFFFSVSCMFLGVIRIVLCNK