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Sed0021250 (gene) of Chayote v1 genome

Gene IDSed0021250
OrganismSechium edule (Chayote v1)
DescriptionEmbryo defective
Genome locationLG02:39359061..39362158
RNA-Seq ExpressionSed0021250
SyntenySed0021250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017475.1 hypothetical protein SDJN02_19340 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-7187.5Show/hide
Query:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA
        MKARIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPND+K+EESENK N+AKSA KEKE STLEDLA
Subjt:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA

Query:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
        +AARGGMETLKPALQRVYMT+ASAYRDALK+FIDGYQEGIQQVMEKK+ SDS KG +K+K
Subjt:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
XP_022144745.1 uncharacterized protein LOC111014361 [Momordica charantia]1.3e-7693.75Show/hide
Query:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA
        MK RIVLRKLYDYIRYDLKEIAFPSSLPDPPH+KKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPND+KVEESENK+NAAKSASKEKE STLEDLA
Subjt:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA

Query:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
        +AARGGMETLKPALQRVYMTRASAYRDALK+FIDGYQEG+QQVMEKKEASDS KG DKIK
Subjt:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
XP_022934670.1 uncharacterized protein LOC111441792 [Cucurbita moschata]7.4e-7288.12Show/hide
Query:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA
        MKARIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPND+KVEESENK N+AKSA KEKE STLEDLA
Subjt:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA

Query:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
        +AARGGMETLKPALQRVYMT+ASAYRDALK+FIDGYQEGIQQVMEKK+ SDS KG +K+K
Subjt:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
XP_023522298.1 uncharacterized protein LOC111786187 [Cucurbita pepo subsp. pepo]3.0e-7389.38Show/hide
Query:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA
        MKARIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTWHERFLVLKEASRLYAASWVRDIGP+LRPND+KVEESENK N+AKSA KEKE STLEDLA
Subjt:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA

Query:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
        +AARGGMETLKPALQRVYMT+ASAYRDALK+FIDGYQEGIQQVMEKKE SDS KG +K+K
Subjt:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
XP_038905860.1 uncharacterized protein LOC120091803 [Benincasa hispida]1.3e-7188.05Show/hide
Query:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA
        MK RIVLRK+YDYIRYDLKEIAFPSSLPDPPH+KKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPND+KV+ESENK+N+ KSA KEK  STLEDLA
Subjt:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA

Query:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKI
        +AARGGMETLKPALQRVYMTRASAYRDALK+FIDGYQEGIQ V+EKK+ SDS KG DKI
Subjt:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKI
TrEMBL top hitse value%identityAlignment
A0A0A0LEN2 Uncharacterized protein1.3e-6986.16Show/hide
Query:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA
        MKA+IVLRK+YDY+RYDLKEIAFPSSLPDPPH+KKR KL+W+ERFLVLKEASRLYAASWVRDIGP+LRP D+KV+ESENK N+ K A KEKE STLEDLA
Subjt:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA

Query:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKI
        +AARGGMETLKPALQRVYMTRASAYRDALK+FIDGYQEGIQQVMEKK ASDS KG DKI
Subjt:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKI
A0A1S3B6Q8 uncharacterized protein LOC1034866416.7e-7186.16Show/hide
Query:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA
        MKA+IV RK+YDY+RYDLKEIAFPSSLPDPPH+KKR KLTWH+RFLVLKEASRLYAASWVRDIGP+LRP+++KVEESENK+N+ KSA KEKE STLEDLA
Subjt:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA

Query:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKI
        +AARGGMETLKPALQRVYMTRA+AYRDALK FIDGYQEGIQQVMEKK+ASDS KG DKI
Subjt:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKI
A0A6J1CSI2 uncharacterized protein LOC1110143616.3e-7793.75Show/hide
Query:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA
        MK RIVLRKLYDYIRYDLKEIAFPSSLPDPPH+KKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPND+KVEESENK+NAAKSASKEKE STLEDLA
Subjt:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA

Query:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
        +AARGGMETLKPALQRVYMTRASAYRDALK+FIDGYQEG+QQVMEKKEASDS KG DKIK
Subjt:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
A0A6J1F8D8 uncharacterized protein LOC1114417923.6e-7288.12Show/hide
Query:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA
        MKARIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPND+KVEESENK N+AKSA KEKE STLEDLA
Subjt:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA

Query:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
        +AARGGMETLKPALQRVYMT+ASAYRDALK+FIDGYQEGIQQVMEKK+ SDS KG +K+K
Subjt:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
A0A6J1J6G3 uncharacterized protein LOC1114817752.3e-7187.5Show/hide
Query:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA
        MKARIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPND+KVEESENK N+A+SA KEKE STLEDLA
Subjt:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA

Query:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
        +AARGGMETLKPALQRVYMT+AS YRDALK+FIDGYQEGIQQVMEKKE SDS KG +K+K
Subjt:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G06240.1 embryo defective 27351.5e-5470.39Show/hide
Query:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA
        MK ++V RK+ DYI YDLKEI  PSSLPDPPH+ KRRKLTWHERFLVLKEASRLYAASWVRDIGP+LRPND+K +        AK A  E E S LEDLA
Subjt:  MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLA

Query:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDS
        +AARGGMETL+PAL R+YMTRAS Y+DAL SFI GY EG+QQVM+ K  S++
Subjt:  LAARGGMETLKPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCGAGGATCGTTTTGAGGAAGCTTTATGATTACATTCGCTATGACTTGAAGGAAATTGCATTTCCTTCGTCATTGCCGGATCCTCCGCATCTGAAGAAGCGTCG
AAAGCTCACTTGGCATGAACGGTTCTTGGTTTTGAAGGAGGCTTCCAGGTTATATGCTGCAAGCTGGGTTCGGGACATTGGTCCTGACCTGCGACCAAATGACTTTAAGG
TGGAAGAAAGTGAAAACAAATCAAATGCTGCAAAAAGTGCATCCAAAGAGAAAGAACATTCAACACTCGAAGACCTTGCTCTGGCTGCAAGAGGTGGAATGGAGACATTA
AAACCAGCTTTGCAGCGAGTGTATATGACCAGAGCTTCTGCATATAGAGACGCTCTAAAAAGTTTTATAGATGGCTATCAAGAAGGTATTCAGCAAGTGATGGAGAAGAA
GGAAGCTTCTGATTCTCTAAAGGGAGGCGATAAAATCAAATAA
mRNA sequenceShow/hide mRNA sequence
GCAGCCTCCCGTCTTCTTCTTCGAAGAAAATCGCATTTCTTCTTCGCCAAACTTCGCCGGAAAACACACCTCGCCGGTGGAACACAAAATTGGAGCTGAAAATGCTTGGA
ACGGTGATATAAGCGAGAAAATCCGTTGCAGGAATGAAGGCGAGGATCGTTTTGAGGAAGCTTTATGATTACATTCGCTATGACTTGAAGGAAATTGCATTTCCTTCGTC
ATTGCCGGATCCTCCGCATCTGAAGAAGCGTCGAAAGCTCACTTGGCATGAACGGTTCTTGGTTTTGAAGGAGGCTTCCAGGTTATATGCTGCAAGCTGGGTTCGGGACA
TTGGTCCTGACCTGCGACCAAATGACTTTAAGGTGGAAGAAAGTGAAAACAAATCAAATGCTGCAAAAAGTGCATCCAAAGAGAAAGAACATTCAACACTCGAAGACCTT
GCTCTGGCTGCAAGAGGTGGAATGGAGACATTAAAACCAGCTTTGCAGCGAGTGTATATGACCAGAGCTTCTGCATATAGAGACGCTCTAAAAAGTTTTATAGATGGCTA
TCAAGAAGGTATTCAGCAAGTGATGGAGAAGAAGGAAGCTTCTGATTCTCTAAAGGGAGGCGATAAAATCAAATAAAAAATTCTGGTCGTGTTTGTGCTTTATTGTAAGA
GCTGCAGAACTATGACTAAACTACTTTAGAGGATTAGGCTGTTCAGTTTGCAGTTTAAAAATTGGTTGAGTTGAGTTTTTAGTTTAGTTTCTGGAGGTTCAATTTGATAC
ATATCCAATTTTAGGTATTTCCTAAATATACACTACAAGCACACAGTCATGAGAAGGATAGCAAGTTTAACCTTTATGTATACTACAGAACTAGTTGCATGACTTCTATG
CTTATTTTCCCCTGCTTCTATTGTAGAATTTTCTAACAAGAAGGCATGTAAATACTTGTGTGAAGAAAACTGCTTTGTCTGCTAAATGAATGGTTCAATAGTTTACTAAC
AAGAGCATAGCTCTAGTGGTATTATGTACAATCTAATACTTTAGAGGTTATGGGTTCAATCTATTACTTTAGAGGTTATGAGTTCAAATCCTTTAATGTCCGAAATGTTG
TTGAGTTCTACATAAAAATTAAAAAAAGAGAATAATTCAATTGCTCTTTTCTTATTTCTCCTATGTGCATGTGGC
Protein sequenceShow/hide protein sequence
MKARIVLRKLYDYIRYDLKEIAFPSSLPDPPHLKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDFKVEESENKSNAAKSASKEKEHSTLEDLALAARGGMETL
KPALQRVYMTRASAYRDALKSFIDGYQEGIQQVMEKKEASDSLKGGDKIK