CuGenDBv2

Gene ID	Sed0021253
Organism	Sechium edule (Chayote v1)
Description	protein MODIFYING WALL LIGNIN-1-like
Genome location	LG05:36309012..36312022
RNA-Seq Expression	Sed0021253
Synteny	Sed0021253
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009606 - Modifying wall lignin-1/2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022139149.1 uncharacterized protein LOC111010123 isoform X1 [Momordica charantia]

4.3e-38

68.07

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Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL
        LPESEAFK GV  LVCL +AQI G+ +ICH  W KEK KSCS   PL    L ISW++FGIA+ +MSGATSM+R+QEY KGW+EGECYVVKDGIFVGAAL
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL

Query:  LVIVNGGFTIGSIAMSREA
        LV++NGG TIGS A+ R +
Subjt:  LVIVNGGFTIGSIAMSREA

XP_022139157.1 uncharacterized protein LOC111010123 isoform X2 [Momordica charantia]

4.3e-38

68.07

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Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL
        LPESEAFK GV  LVCL +AQI G+ +ICH  W KEK KSCS   PL    L ISW++FGIA+ +MSGATSM+R+QEY KGW+EGECYVVKDGIFVGAAL
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL

Query:  LVIVNGGFTIGSIAMSREA
        LV++NGG TIGS A+ R +
Subjt:  LVIVNGGFTIGSIAMSREA

XP_022937014.1 uncharacterized protein LOC111443438 [Cucurbita moschata]

8.9e-36

64.96

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Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL
        LPESEAFK GV G+VCL +A I G+ +ICH  W KE  KSCS   PL    L ISW++FGIA+ +M GATSM+R+QEY KGW+EGECY+VKDG+FVGAAL
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL

Query:  LVIVNGGFTIGSIAMSR
        LV++NGG TIGS A+ R
Subjt:  LVIVNGGFTIGSIAMSR

XP_023535227.1 uncharacterized protein LOC111796718 [Cucurbita pepo subsp. pepo]

8.9e-36

64.96

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Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL
        LPESEAFK GV G+VCL +A I G+ +ICH  W KE  KSCS   PL    L ISW++FGIA+ +M GATSM+R+QEY KGW+EGECY+VKDG+FVGAAL
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL

Query:  LVIVNGGFTIGSIAMSR
        LV++NGG TIGS A+ R
Subjt:  LVIVNGGFTIGSIAMSR

XP_038896171.1 protein MODIFYING WALL LIGNIN-1 [Benincasa hispida]

3.6e-37

68.38

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Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL
        LPESEAFK GV GLVCL +AQI G+A+ICH  W KE  KSCS   P+    L ISW++FGIA+V+MSGATSM+R+QEY KGW+EGECYVVKDGIFVGAA+
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL

Query:  LVIVNGGFTIGSIAMSR
        LV++NGG TI S A+ R
Subjt:  LVIVNGGFTIGSIAMSR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B9G0 uncharacterized protein LOC103487629

2.8e-35

65.81

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Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL
        LPESEAFK G+ GLVCL +AQI GS +I H  W KE  KSCS   PL    L ISW++F IA+++MSGATSM+R+QEY +GW+EGECY+VKDGIFVGAAL
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL

Query:  LVIVNGGFTIGSIAMSR
        LV++NGG TIGS A+ R
Subjt:  LVIVNGGFTIGSIAMSR

A0A6J1CC41 uncharacterized protein LOC111010123 isoform X1

2.1e-38

68.07

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Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL
        LPESEAFK GV  LVCL +AQI G+ +ICH  W KEK KSCS   PL    L ISW++FGIA+ +MSGATSM+R+QEY KGW+EGECYVVKDGIFVGAAL
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL

Query:  LVIVNGGFTIGSIAMSREA
        LV++NGG TIGS A+ R +
Subjt:  LVIVNGGFTIGSIAMSREA

A0A6J1CD79 uncharacterized protein LOC111010123 isoform X2

2.1e-38

68.07

Show/hide

Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL
        LPESEAFK GV  LVCL +AQI G+ +ICH  W KEK KSCS   PL    L ISW++FGIA+ +MSGATSM+R+QEY KGW+EGECYVVKDGIFVGAAL
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL

Query:  LVIVNGGFTIGSIAMSREA
        LV++NGG TIGS A+ R +
Subjt:  LVIVNGGFTIGSIAMSREA

A0A6J1F9Y8 uncharacterized protein LOC111443438

4.3e-36

64.96

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Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL
        LPESEAFK GV G+VCL +A I G+ +ICH  W KE  KSCS   PL    L ISW++FGIA+ +M GATSM+R+QEY KGW+EGECY+VKDG+FVGAAL
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL----LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAAL

Query:  LVIVNGGFTIGSIAMSR
        LV++NGG TIGS A+ R
Subjt:  LVIVNGGFTIGSIAMSR

A0A6J1II23 uncharacterized protein LOC111477105

9.6e-36

64.66

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Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL---LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALL
        LPESEAFK GV G+VCL +A I G+ +ICH  W KE  KSCS   PL   L ISW++FGIA+ ++ GATSM+R+QEY KGW+EGECY+VKDG+FVGAALL
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPL---LFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALL

Query:  VIVNGGFTIGSIAMSR
        V++NGG TIGS A+ R
Subjt:  VIVNGGFTIGSIAMSR

SwissProt top hits

e value

%identity

Alignment

A2RVU1 Protein MODIFYING WALL LIGNIN-1

1.4e-20

42.73

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Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPLLFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIV
        LPE+ AF  G+  LVC++VAQI G+ VIC G    +K+++      LL  SW+ F +A+ L+S   SMNR+Q Y KGW+  ECY+VKDG+F  +  L + 
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPLLFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIV

Query:  NGGFTIGSIA
             +G+ A
Subjt:  NGGFTIGSIA

O65708 Protein MODIFYING WALL LIGNIN-2

6.4e-13

34.78

Show/hide

Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITP------LLFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGA
        +P S AF  G   ++C  +AQI G+ V+      + K +    IT       LL +SW  F + ++++S A SM+R Q Y +GW++ +CY+VKDG+F  +
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITP------LLFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGA

Query:  ALLVIVN-GGFTIGS
          L I+  G  TI +
Subjt:  ALLVIVN-GGFTIGS

Arabidopsis top hits

e value

%identity

Alignment

AT1G31720.1 Protein of unknown function (DUF1218)

1.0e-21

42.73

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Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPLLFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIV
        LPE+ AF  G+  LVC++VAQI G+ VIC G    +K+++      LL  SW+ F +A+ L+S   SMNR+Q Y KGW+  ECY+VKDG+F  +  L + 
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPLLFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIV

Query:  NGGFTIGSIA
             +G+ A
Subjt:  NGGFTIGSIA

AT4G19370.1 Protein of unknown function (DUF1218)

4.6e-14

34.78

Show/hide

Query:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITP------LLFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGA
        +P S AF  G   ++C  +AQI G+ V+      + K +    IT       LL +SW  F + ++++S A SM+R Q Y +GW++ +CY+VKDG+F  +
Subjt:  LPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITP------LLFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGA

Query:  ALLVIVN-GGFTIGS
          L I+  G  TI +
Subjt:  ALLVIVN-GGFTIGS

Sequences

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CDS sequence

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ATGTTACCTGAAAGTGAAGCGTTCAAATCGGGAGTTGTGGGTTTGGTGTGCTTGGCGGTGGCGCAGATCTTCGGGAGCGCTGTAATCTGCCATGGCTGTTGGGGAAAGGA
GAAATCAAAGAGTTGCAGCGCCATAACGCCCCTGCTTTTCATCTCTTGGCTCACCTTCGGAATTGCTATGGTTTTAATGAGTGGGGCAACCAGCATGAACAGGAAACAAG
AGTATAAGAAAGGGTGGATTGAAGGAGAGTGTTATGTGGTCAAAGATGGTATATTTGTTGGTGCGGCACTATTGGTTATCGTCAACGGAGGCTTCACCATAGGCTCGATC
GCCATGAGCAGAGAAGCCCTCATAGATAACTTGATATTCAAACTTACGACATTTTAA

mRNA sequence

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CTGGAAGAGCCTTTTTCTCCGATCACCAGGCCGCCATGGAAAAACCTCGGCCGAGCTTCGCGATAAGCTGTTCCGTCGTCGCCATCCTGACTCTGACCTCCTTCGCTTCA
TGTATGGCTGCTGAATTCAACAGAAAAAAAGTAAGTTTCTCTTAATTTCCTTCTCATATCAAAGAATTGATTCTTCCTACAAAAAATTCGTGAATCTGACGCAGAAAAAG
GACCTGAAATTGAACGGGAGATTGTGTATGTTACCTGAAAGTGAAGCGTTCAAATCGGGAGTTGTGGGTTTGGTGTGCTTGGCGGTGGCGCAGATCTTCGGGAGCGCTGT
AATCTGCCATGGCTGTTGGGGAAAGGAGAAATCAAAGAGTTGCAGCGCCATAACGCCCCTGCTTTTCATCTCTTGGCTCACCTTCGGAATTGCTATGGTTTTAATGAGTG
GGGCAACCAGCATGAACAGGAAACAAGAGTATAAGAAAGGGTGGATTGAAGGAGAGTGTTATGTGGTCAAAGATGGTATATTTGTTGGTGCGGCACTATTGGTTATCGTC
AACGGAGGCTTCACCATAGGCTCGATCGCCATGAGCAGAGAAGCCCTCATAGATAACTTGATATTCAAACTTACGACATTTTAA

Protein sequence

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MLPESEAFKSGVVGLVCLAVAQIFGSAVICHGCWGKEKSKSCSAITPLLFISWLTFGIAMVLMSGATSMNRKQEYKKGWIEGECYVVKDGIFVGAALLVIVNGGFTIGSI
AMSREALIDNLIFKLTTF

Sed0021253 (gene) of Chayote v1 genome