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Sed0021259 (gene) of Chayote v1 genome

Gene IDSed0021259
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:33705566..33706726
RNA-Seq ExpressionSed0021259
SyntenySed0021259
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019402.1 hypothetical protein SDJN02_18363, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-6468.81Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV
        MKKL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VNNFS HRGKAA QK  AA  GSDHPP  SC CFRCYTSYWV
Subjt:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV

Query:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSGPSS--------------NVEEA---EMGAAVNGGEKEAEKGPVRWIVSFIGERIWGG
        RWDSSPNRQ+IH IIDAYEE LAE+KAGK+NKKERKKR +GSG  S               VEE+   EM AA +GGE EAEKG VRWIVS+IGE+IWGG
Subjt:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSGPSS--------------NVEEA---EMGAAVNGGEKEAEKGPVRWIVSFIGERIWGG

Query:  WD
        W+
Subjt:  WD

XP_022927395.1 uncharacterized protein LOC111434229 [Cucurbita moschata]4.9e-6468.81Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV
        MKKL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VNNFS HRGKAA QK  AA  GSDHPP  SC CFRCYTSYWV
Subjt:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV

Query:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSGPSS--------------NVEEA---EMGAAVNGGEKEAEKGPVRWIVSFIGERIWGG
        RWDSSPNRQ+IH IIDAYEE LAE+KAGK+NKKERKKR +GSG  S               VEE+   EM AA +GGE EAEKG VRWIVS+IGE+IWGG
Subjt:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSGPSS--------------NVEEA---EMGAAVNGGEKEAEKGPVRWIVSFIGERIWGG

Query:  WD
        W+
Subjt:  WD

XP_023001610.1 uncharacterized protein LOC111495687 [Cucurbita maxima]1.9e-6366.18Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV
        M KL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VNNFS HRGKAAQQK  AA  GSDHPPA SC CFRCYTSYWV
Subjt:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV

Query:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSG-------------------PSSNVEEAEMGAAVNGGEKEAEKGPVRWIVSFIGERIW
        RWDSSPNRQ+IH IIDAYEE LAE+KAGK+NKKERKKR +GSG                     S V E E      GGE EAEKG VRWIV +IGE+IW
Subjt:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSG-------------------PSSNVEEAEMGAAVNGGEKEAEKGPVRWIVSFIGERIW

Query:  GGWD
        GGW+
Subjt:  GGWD

XP_023520004.1 uncharacterized protein LOC111783314 [Cucurbita pepo subsp. pepo]4.1e-6365.69Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV
        MKKL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VNNFS HRGKAA QK  AA  GSDHPP  SC CFRCYTSYWV
Subjt:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV

Query:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSG-------------------PSSNVEEAEMGAAVNGGEKEAEKGPVRWIVSFIGERIW
        RWDSSPNRQ+IH IIDAYEE LAE+KAGK++KKERKKR +GSG                     S V E E      GGE EAEKG VRWIVS+IGE+IW
Subjt:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSG-------------------PSSNVEEAEMGAAVNGGEKEAEKGPVRWIVSFIGERIW

Query:  GGWD
        GGW+
Subjt:  GGWD

XP_038894832.1 uncharacterized protein LOC120083238 [Benincasa hispida]1.2e-6271.72Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAP-AANGGSDHPPASSCGCFRCYTSYW
        MKKL+RKRGTVHPS PP+I D LSFLP A+LTLAAALS  DR+VLAYLISS      AVNN S+HRGKAA QK P AA GGSDHPPA SC CFRCYTSYW
Subjt:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAP-AANGGSDHPPASSCGCFRCYTSYW

Query:  VRWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSG--SGPSSN------VEEAEMGA----AVNGGEKEAEKGPVRWIVSFIGERIWGGWD
        VRWDSSPNRQLIH IIDAYEEKLAE+KAGK+NKKERKKR SG  SGP          EE E+      A  GGE+E EKG VR IVSFIGERIWG W+
Subjt:  VRWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSG--SGPSSN------VEEAEMGA----AVNGGEKEAEKGPVRWIVSFIGERIWGGWD

TrEMBL top hitse value%identityAlignment
A0A1S3C9P0 uncharacterized protein LOC1034982288.1e-5765.8Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNF------SDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV
        MKKL+RK GTVHPS PP+I D LSFLP A+LTL++ALS  DR+VLAYLISS  N+F      S HRGKAA  K  A   GSDHPPA SC CF+CYTSYWV
Subjt:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNF------SDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV

Query:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRG-----SGSGPSSNVEEA---EMGAAVNGGEKEAEKGPVRWIVSFIGERIWGGWD
        RWDSSPNRQLIH IIDAYE+KLAETK GK+NKKERKKR      SG G     E A   E      GGE+EAEKGPVR IVS +GE+IWG W+
Subjt:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRG-----SGSGPSSNVEEA---EMGAAVNGGEKEAEKGPVRWIVSFIGERIWGGWD

A0A5D3CKA3 Uncharacterized protein8.1e-5765.8Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNF------SDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV
        MKKL+RK GTVHPS PP+I D LSFLP A+LTL++ALS  DR+VLAYLISS  N+F      S HRGKAA  K  A   GSDHPPA SC CF+CYTSYWV
Subjt:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNF------SDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV

Query:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRG-----SGSGPSSNVEEA---EMGAAVNGGEKEAEKGPVRWIVSFIGERIWGGWD
        RWDSSPNRQLIH IIDAYE+KLAETK GK+NKKERKKR      SG G     E A   E      GGE+EAEKGPVR IVS +GE+IWG W+
Subjt:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRG-----SGSGPSSNVEEA---EMGAAVNGGEKEAEKGPVRWIVSFIGERIWGGWD

A0A6J1ENT0 uncharacterized protein LOC1114342292.4e-6468.81Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV
        MKKL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VNNFS HRGKAA QK  AA  GSDHPP  SC CFRCYTSYWV
Subjt:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV

Query:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSGPSS--------------NVEEA---EMGAAVNGGEKEAEKGPVRWIVSFIGERIWGG
        RWDSSPNRQ+IH IIDAYEE LAE+KAGK+NKKERKKR +GSG  S               VEE+   EM AA +GGE EAEKG VRWIVS+IGE+IWGG
Subjt:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSGPSS--------------NVEEA---EMGAAVNGGEKEAEKGPVRWIVSFIGERIWGG

Query:  WD
        W+
Subjt:  WD

A0A6J1JYL3 uncharacterized protein LOC1114900458.1e-5765.45Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHRGKAAQQK---APAANGGSDHPPASSCGCFRCYTSYWVRWD
        MKK +R+RGTVHPSPP  I D LSFLPAA+LTLAAAL+  DR+VLAYLISSA  N+S HRGK++QQK    P+A  GSDHPP+ SCGCFRCYT YWVRWD
Subjt:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHRGKAAQQK---APAANGGSDHPPASSCGCFRCYTSYWVRWD

Query:  SSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSG----------SGPSSNVEEAEMGAAVNGGEKEAEKGPVRWIVSFIGERIWGGW
        SSPNR++IH II+AYEEKLAETK GK NKKERKKR  G           G  +  E A  G    GGE+ AEKG VR IV FIGE IWGG+
Subjt:  SSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSG----------SGPSSNVEEAEMGAAVNGGEKEAEKGPVRWIVSFIGERIWGGW

A0A6J1KLN6 uncharacterized protein LOC1114956879.0e-6466.18Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV
        M KL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VNNFS HRGKAAQQK  AA  GSDHPPA SC CFRCYTSYWV
Subjt:  MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWV

Query:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSG-------------------PSSNVEEAEMGAAVNGGEKEAEKGPVRWIVSFIGERIW
        RWDSSPNRQ+IH IIDAYEE LAE+KAGK+NKKERKKR +GSG                     S V E E      GGE EAEKG VRWIV +IGE+IW
Subjt:  RWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSG-------------------PSSNVEEAEMGAAVNGGEKEAEKGPVRWIVSFIGERIW

Query:  GGWD
        GGW+
Subjt:  GGWD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12020.1 unknown protein1.1e-3242.11Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQ--LSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHRGKAAQQKAPAANGGS---DHPPASSCGCFRCYTSYWVR
        MKKL+RK GTVHPSPP +  +   L+ LP A+ +LAA LSP DR+VLAYLIS+A  ++S  R   ++     A+  +   +H P   C CF CYTSYWVR
Subjt:  MKKLHRKRGTVHPSPPPVIYDQ--LSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHRGKAAQQKAPAANGGS---DHPPASSCGCFRCYTSYWVR

Query:  WDSSPNRQLIHAIIDAYEEKLAETKAGKSN---KKERKKRG-----------------------------------------SGSGPSSNVEEAEMGAAV
        WDSSP+RQLIH IIDA+E+ L + K  K N   KK+R+KR                                           G G S  +E  E   A 
Subjt:  WDSSPNRQLIHAIIDAYEEKLAETKAGKSN---KKERKKRG-----------------------------------------SGSGPSSNVEEAEMGAAV

Query:  NGGEK-EAEKGPVRWIVSFIGERIWGGW
        +  EK E EKG VR  VSFIGE+++G W
Subjt:  NGGEK-EAEKGPVRWIVSFIGERIWGGW

AT1G24270.1 unknown protein2.4e-1640.44Show/hide
Query:  KRGTVHPSPPPVIY------DQLS---FLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWD
        K+G VHPSPP          D LS    L +A+L L + LS  D +VLAYLI+ ++N  +    K  +         S   P   C CF CYTSYW +WD
Subjt:  KRGTVHPSPPPVIY------DQLS---FLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWD

Query:  SSPNRQLIHAIIDAYEEKLA--ETKAGKSNKKERKK
        SS NR+LI+ II+A+E+ L   E  A  ++KK +K+
Subjt:  SSPNRQLIHAIIDAYEEKLA--ETKAGKSNKKERKK

AT1G62422.1 unknown protein4.0e-3246.46Show/hide
Query:  MKKLHRKRGTVHPSPPPVIYDQ---LSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWD
        MKKL RK GTVHPSPPP I      LS LP A+L+L AALS  DR+VLAYLIS++ ++    R K  ++        + H P   C CF CYTSYWVRWD
Subjt:  MKKLHRKRGTVHPSPPPVIYDQ---LSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWD

Query:  SSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSG-------------PSSNVE----EAEMGAAVNGGEKEAEKGPVRWIVSFIGERIWGGW
        +SP RQLIH IIDAYE+ L   +  K  K  RK+ G  SG              SS+ E    ++E      G E E EKG V  ++SFIG+R  G W
Subjt:  SSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSG-------------PSSNVE----EAEMGAAVNGGEKEAEKGPVRWIVSFIGERIWGGW

AT5G13090.1 unknown protein3.9e-1932.95Show/hide
Query:  RKRGTVHPSPPPVIYDQ-------------------LSFLPAAVLTLAAALSPGDRQVLAYLIS--SAVNNFSDHRGKAAQQKAPAANGGSDHPPASSCG
        +K+G V+PSPPP                        L  LPA +L L + LS  +R+VLAYLI+  + +++  +   K   +K    +  +  PP   C 
Subjt:  RKRGTVHPSPPPVIYDQ-------------------LSFLPAAVLTLAAALSPGDRQVLAYLIS--SAVNNFSDHRGKAAQQKAPAANGGSDHPPASSCG

Query:  CFRCYTSYWVRWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSGPSSNVEEAEMGAAV-NGGEKEAE
        CF CYT+YW RWDSSPNR+LIH II+A+E    E  +   +K +R K+    G      +++    V + G+K+++
Subjt:  CFRCYTSYWVRWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSGPSSNVEEAEMGAAV-NGGEKEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGCTCCACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGCCGGTCATCTACGACCAACTCTCGTTTCTCCCCGCCGCCGTCCTCACCCTCGCGGCGGCGCT
CTCCCCCGGCGACCGACAGGTTTTGGCTTACCTCATCTCCTCCGCCGTCAACAACTTCTCCGACCACCGCGGCAAGGCCGCCCAACAGAAAGCCCCCGCCGCAAATGGCG
GCTCCGATCACCCGCCGGCTTCCTCCTGCGGCTGTTTCCGGTGCTACACGAGCTACTGGGTCCGATGGGACTCGTCTCCGAATCGGCAGCTTATTCACGCAATCATCGAC
GCTTATGAGGAGAAGTTGGCGGAGACGAAAGCCGGCAAGAGCAATAAGAAGGAAAGGAAGAAGAGGGGTTCCGGGTCGGGTCCGAGTTCGAATGTAGAAGAGGCGGAGAT
GGGGGCGGCGGTAAACGGCGGCGAGAAAGAGGCGGAGAAAGGGCCGGTGAGGTGGATAGTGAGTTTCATAGGGGAAAGAATCTGGGGTGGCTGGGATTATTGA
mRNA sequenceShow/hide mRNA sequence
GCGGCTAAAAAAACTTTTCTACATAATTAGGAACAAAAAACAGAGAAAAAACAAATCCCTCGACCCTGACTTGGCAGACCGGAAAGGTAAGAAAAAACAAGTGTCAAAGT
TCACCTACACATAATCCGGCTCGGATCAAGTCCGAACCAGAGCACGAAAAACCGTCGATCATTCAACTTTTTCGAAACCCCACAGCCTTCAATTCAAAGAATCTCTGCCG
TACGATGGTTCGTCCATCATGGATGTACAACGTGTACACCAATTCCCGCGTTCCACCGAAGTATTTCCCAGCGCCATGCATTGCCATTTGCATCGTTCCGAATCCCCACT
CGCACCTTCTCCACACGCGCTACCACGCTCAAACACTTCAATAAAATCTCTGCAACTTTTTGCTACTCAGTCCTTACGAATCTTTCTCATTTTTTTTCGCTCCGATGAAG
AAGCTCCACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGCCGGTCATCTACGACCAACTCTCGTTTCTCCCCGCCGCCGTCCTCACCCTCGCGGCGGCGCTCTCCCC
CGGCGACCGACAGGTTTTGGCTTACCTCATCTCCTCCGCCGTCAACAACTTCTCCGACCACCGCGGCAAGGCCGCCCAACAGAAAGCCCCCGCCGCAAATGGCGGCTCCG
ATCACCCGCCGGCTTCCTCCTGCGGCTGTTTCCGGTGCTACACGAGCTACTGGGTCCGATGGGACTCGTCTCCGAATCGGCAGCTTATTCACGCAATCATCGACGCTTAT
GAGGAGAAGTTGGCGGAGACGAAAGCCGGCAAGAGCAATAAGAAGGAAAGGAAGAAGAGGGGTTCCGGGTCGGGTCCGAGTTCGAATGTAGAAGAGGCGGAGATGGGGGC
GGCGGTAAACGGCGGCGAGAAAGAGGCGGAGAAAGGGCCGGTGAGGTGGATAGTGAGTTTCATAGGGGAAAGAATCTGGGGTGGCTGGGATTATTGAAGATTAACTTGGA
AAGTTTTCTGTTAATTAATTATTAATTAATTACTTCCATTAATTATGGAGGAAATGGAAGAAGAAAGAAAAAGCTCATCTTATTGTTCTTCATCTTTTGATTCTGGTTGT
TAGTTGTAAATAGTTCTTATGCTTTGCATGTATAAATTAATCAATAGTTTTTCAAGTTGGG
Protein sequenceShow/hide protein sequence
MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIID
AYEEKLAETKAGKSNKKERKKRGSGSGPSSNVEEAEMGAAVNGGEKEAEKGPVRWIVSFIGERIWGGWDY