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Sed0021260 (gene) of Chayote v1 genome

Gene IDSed0021260
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:35740029..35740595
RNA-Seq ExpressionSed0021260
SyntenySed0021260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038877923.1 uncharacterized protein LOC120070133 [Benincasa hispida]1.0e-0828.78Show/hide
Query:  MDIIGFLVYM-----NGPNSIEYDVPPCTQINAPRDIDFHLFINGLCQVLSIERSEEIEIAFKYGT--------IKIPLQNVNEFNFMKNIA--TSEAIH
        MD++ FL YM     NGP+ IEYD  P  +IN  R  DF+  I+G     SI R + +E+ F+YG+        I I L++  +  FM + A      + 
Subjt:  MDIIGFLVYM-----NGPNSIEYDVPPCTQINAPRDIDFHLFINGLCQVLSIERSEEIEIAFKYGT--------IKIPLQNVNEFNFMKNIA--TSEAIH

Query:  LYVTRPHIHSTSQDEQYMEEEEIEEDDKENATYPGINTSNIDDPPFTNELESSSAEDSESFQGVDVVLSFYTTLNMDVVNAL--SNRGIELEIDGPNTLR
        LY+++P + S +   + +E  E+E    E+  Y     +N D+    ++ +    + S  F GV  V   +T ++++ +     S  G +  + G ++L 
Subjt:  LYVTRPHIHSTSQDEQYMEEEEIEEDDKENATYPGINTSNIDDPPFTNELESSSAEDSESFQGVDVVLSFYTTLNMDVVNAL--SNRGIELEIDGPNTLR

Query:  KRMIF
        K MIF
Subjt:  KRMIF

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTATTGGGTTTCTTGTGTACATGAATGGACCAAATAGTATCGAGTACGACGTTCCACCTTGTACACAAATTAATGCACCTAGGGACATTGACTTCCACTTATT
CATCAATGGATTATGTCAAGTGCTTTCAATAGAAAGAAGTGAAGAAATTGAGATTGCTTTTAAGTACGGAACTATTAAGATACCCTTACAGAATGTGAATGAATTCAATT
TCATGAAAAACATTGCTACTTCAGAAGCAATACACTTGTATGTTACTCGACCACACATTCATAGTACATCACAAGATGAACAATATATGGAGGAAGAAGAAATAGAGGAG
GATGACAAGGAAAATGCCACATATCCAGGAATAAATACATCCAATATTGATGACCCGCCGTTTACTAATGAATTAGAGAGTTCTTCAGCCGAGGACTCTGAGTCATTCCA
GGGTGTAGATGTAGTCCTTTCATTTTACACTACATTGAATATGGATGTTGTTAATGCTCTATCAAATAGAGGCATTGAACTAGAGATTGATGGACCAAACACATTGAGAA
AAAGGATGATTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACATTATTGGGTTTCTTGTGTACATGAATGGACCAAATAGTATCGAGTACGACGTTCCACCTTGTACACAAATTAATGCACCTAGGGACATTGACTTCCACTTATT
CATCAATGGATTATGTCAAGTGCTTTCAATAGAAAGAAGTGAAGAAATTGAGATTGCTTTTAAGTACGGAACTATTAAGATACCCTTACAGAATGTGAATGAATTCAATT
TCATGAAAAACATTGCTACTTCAGAAGCAATACACTTGTATGTTACTCGACCACACATTCATAGTACATCACAAGATGAACAATATATGGAGGAAGAAGAAATAGAGGAG
GATGACAAGGAAAATGCCACATATCCAGGAATAAATACATCCAATATTGATGACCCGCCGTTTACTAATGAATTAGAGAGTTCTTCAGCCGAGGACTCTGAGTCATTCCA
GGGTGTAGATGTAGTCCTTTCATTTTACACTACATTGAATATGGATGTTGTTAATGCTCTATCAAATAGAGGCATTGAACTAGAGATTGATGGACCAAACACATTGAGAA
AAAGGATGATTTTTTAA
Protein sequenceShow/hide protein sequence
MDIIGFLVYMNGPNSIEYDVPPCTQINAPRDIDFHLFINGLCQVLSIERSEEIEIAFKYGTIKIPLQNVNEFNFMKNIATSEAIHLYVTRPHIHSTSQDEQYMEEEEIEE
DDKENATYPGINTSNIDDPPFTNELESSSAEDSESFQGVDVVLSFYTTLNMDVVNALSNRGIELEIDGPNTLRKRMIF