CuGenDBv2

Gene ID	Sed0021268
Organism	Sechium edule (Chayote v1)
Description	F-box/LRR-repeat protein At5g63520
Genome location	LG01:11309172..11312825
RNA-Seq Expression	Sed0021268
Synteny	Sed0021268
Gene Ontology terms	NA
InterPro domains	IPR019494 - FIST, C-domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6573137.1 F-box/LRR-repeat protein, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-137

58.08

Show/hide

Query:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEVS-------------------------
        +N    VAV+EVL +VLSEPIRPHFAIAC+GVEF+LE     ITK LGSRTPVITN+ARGI+G+DALTNEVKEV                          
Subjt:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEVS-------------------------

Query:  -----------------------QGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF
                               QGAM+DKFIMDI+DFTASVSDSTSPSCII+FG   VD+KPI+AKL        VIVGDAC  FLSKS R  N  +  
Subjt:  -----------------------QGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF

Query:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG
        SLD VALVLARDK KPQG+GET FH TSSTGT+PFGPEL+  ST VRGSRFTWL A             ILKALKEEIEYDDLETDLFIGV Q    +IG
Subjt:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG

Query:  SQNLGPSTSLAMY------KEYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLP--------PTSPQQNEVVFGGLIFSCHCRGEVYFGR
        SQNLGPSTSLAMY      KEY VVDGVGI+PGDSFLFYH  S+TA+SSSY ALE+LATLKPLP         T+PQ+N+ VFGGLIFSCHCRG  YFGR
Subjt:  SQNLGPSTSLAMY------KEYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLP--------PTSPQQNEVVFGGLIFSCHCRGEVYFGR

Query:  PNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGD-------------------------------------DFVRRCLHVYSTVYLVMSHI
        PNVNT+PF+ NFPGVP AG+F A EIG AF+RSI+ EE++  D                                     D + RCLHVYSTVYLVMSH 
Subjt:  PNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGD-------------------------------------DFVRRCLHVYSTVYLVMSHI

Query:  E
        +
Subjt:  E

XP_022137117.1 F-box/LRR-repeat protein At5g63520 [Momordica charantia]

1.3e-143

62.13

Show/hide

Query:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEV--------------------------
        +N  F VAVKEVL +VLSEPIRPHFAIAC+GVEF LE     IT+ LGSRTPVITN ARGIIGIDALTNE+KEV                          
Subjt:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEV--------------------------

Query:  ----------------------SQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNE---T
                              SQ  M+DKFIMDI D+TASVS S SPSCIIMFG QHVDMKPIIAKL        VIVGDAC CFL++S R +NE    
Subjt:  ----------------------SQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNE---T

Query:  QRFSLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQ
            +D VALVLARDKN+PQG+GET+FH TSSTGT+PFGP+L+  STNVRGSRFTWL A             ILKALKEEIEYDDLETDLFIGV+Q   Q
Subjt:  QRFSLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQ

Query:  SIGSQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYHS--ETATSSSYNALENLATLKP-------LPPTSPQQNEV-------VFGGLIFSCH
        SIGSQNLGPS SLAMYK      EY VV+GVGI+PGDSFLFYHS  ETA SSSYN LE+L+TL+P       LP T    N V       VFGGLIFSCH
Subjt:  SIGSQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYHS--ETATSSSYNALENLATLKP-------LPPTSPQQNEV-------VFGGLIFSCH

Query:  CRGEVYFGRPNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHIE-VDRE
        CRG  YFGRPNVNT+PFSVNFPGVPLAG+F AGEIG AF RSI+  EE+  DD VRRCLHVYST+YLVMSH++ V++E
Subjt:  CRGEVYFGRPNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHIE-VDRE

XP_022924041.1 F-box/LRR-repeat protein At5g63520-like isoform X2 [Cucurbita moschata]

3.2e-137

61.04

Show/hide

Query:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKE---------------------------
        +N    VAV+EV+ +VLSEPIRP FAIACVGVEFSLE     IT+ LGSRTPVITN+ARGIIG+DALT+EVKE                           
Subjt:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKE---------------------------

Query:  ---------------------VSQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF
                             VS+ A+ DKF+MDI D+TASVSD TSPSCII+FG QH DMKPIIAKL        VIVGDAC CFLSKS R  NE   F
Subjt:  ---------------------VSQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF

Query:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG
        SL  VALV+ARDKN P+ +GET+FH TSSTGT+PFGPELK  ST+VRGS+FTWL A             ILK L+EEIEYDDLETD+FIGV Q   QSIG
Subjt:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG

Query:  SQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLPPTSPQQNEV-------VFGGLIFSCHCRGEVYFGRP
        SQ+LGPS SLAMYK      +Y VVDGVGI+PGDSFLFYH  SETA+SSS  A E+LATL P P T+   + V       VFGGLIFSCH RG+ YFGRP
Subjt:  SQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLPPTSPQQNEV-------VFGGLIFSCHCRGEVYFGRP

Query:  NVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHI
        NVN++PFS+NFPGVP AGMF AGEIG A SRSI  EEE   DD VRRCLHVYSTVYLV+SHI
Subjt:  NVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHI

XP_023519918.1 F-box/LRR-repeat protein At5g63520-like [Cucurbita pepo subsp. pepo]

1.1e-137

61.04

Show/hide

Query:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKE---------------------------
        +N    VAV+EV+ +VLSEPIRP FAIACVGVEFSLE     IT+ LGSRTPVITN+ARGIIG+DALT+EVKE                           
Subjt:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKE---------------------------

Query:  ---------------------VSQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF
                             VS+ A+ DKF+MDI D+TASVSD TSPSCII+FG QH DMKPIIAKL        VIVGDAC CFLSKS R  NE   F
Subjt:  ---------------------VSQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF

Query:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG
        SL  VALV+ARDKN P+ +GET+FH TSSTGT+PFGPELK  ST++RGS+FTWL A             ILK L+EEIEYDDLETD+FIGV Q   QSIG
Subjt:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG

Query:  SQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLPPTSPQQNEV-------VFGGLIFSCHCRGEVYFGRP
        SQ+LGPS SLAMYK      +Y VVDGVGI+PGDSFLFYH  SETA+SSS  A E+LATL P P T+   + V       VFGGLIFSCH RG+ YFGRP
Subjt:  SQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLPPTSPQQNEV-------VFGGLIFSCHCRGEVYFGRP

Query:  NVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHI
        NVN++PFS+NFPGVP AGMF AGEIG A SRSI+ EEE   DD VRRCLHVYSTVYLVMSHI
Subjt:  NVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHI

XP_023542621.1 F-box/LRR-repeat protein At5g63520-like [Cucurbita pepo subsp. pepo]

3.2e-137

58.5

Show/hide

Query:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEVS-------------------------
        +N    VAV+EVL +VLSEPIRPHFAI C+GVEF+LE     ITK LGSRTPVITN+ARGI+G+DALTNEVKEV                          
Subjt:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEVS-------------------------

Query:  -----------------------QGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF
                               QGAM+DKFIMDI+DFTASVSDSTSPSCII+FG   VD+KPI+AKL        VIVGDAC  FLSKS    N  +  
Subjt:  -----------------------QGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF

Query:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG
        SLD VALVLARDK KPQG+GET FH TSSTGT+PFGPEL+  ST VRGSRFTWL A             ILKALKEEIEYDDLETDLFIGV Q    +IG
Subjt:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG

Query:  SQNLGPSTSLAMY------KEYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLP--------PTSPQQNEVVFGGLIFSCHCRGEVYFGR
        SQNLGPSTSLAMY      KEY VVDGVGI+PGDSFLFYH  S+TA+SSSY ALE+LATLKPLP         T+PQ+N+ VFGGLIFSCHCRG  YFGR
Subjt:  SQNLGPSTSLAMY------KEYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLP--------PTSPQQNEVVFGGLIFSCHCRGEVYFGR

Query:  PNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEE------------------------------EDVGDDFVRRCLHVYSTVYLVMSHIE
        PNVNT+PF+ NFPGVP AG+F A EIG AF+RSI+ EE                              +D  +D + RCLHVYSTVYLVMSH +
Subjt:  PNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEE------------------------------EDVGDDFVRRCLHVYSTVYLVMSHIE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C7B9 F-box/LRR-repeat protein At5g63520

6.5e-144

62.13

Show/hide

Query:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEV--------------------------
        +N  F VAVKEVL +VLSEPIRPHFAIAC+GVEF LE     IT+ LGSRTPVITN ARGIIGIDALTNE+KEV                          
Subjt:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEV--------------------------

Query:  ----------------------SQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNE---T
                              SQ  M+DKFIMDI D+TASVS S SPSCIIMFG QHVDMKPIIAKL        VIVGDAC CFL++S R +NE    
Subjt:  ----------------------SQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNE---T

Query:  QRFSLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQ
            +D VALVLARDKN+PQG+GET+FH TSSTGT+PFGP+L+  STNVRGSRFTWL A             ILKALKEEIEYDDLETDLFIGV+Q   Q
Subjt:  QRFSLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQ

Query:  SIGSQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYHS--ETATSSSYNALENLATLKP-------LPPTSPQQNEV-------VFGGLIFSCH
        SIGSQNLGPS SLAMYK      EY VV+GVGI+PGDSFLFYHS  ETA SSSYN LE+L+TL+P       LP T    N V       VFGGLIFSCH
Subjt:  SIGSQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYHS--ETATSSSYNALENLATLKP-------LPPTSPQQNEV-------VFGGLIFSCH

Query:  CRGEVYFGRPNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHIE-VDRE
        CRG  YFGRPNVNT+PFSVNFPGVPLAG+F AGEIG AF RSI+  EE+  DD VRRCLHVYST+YLVMSH++ V++E
Subjt:  CRGEVYFGRPNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHIE-VDRE

A0A6J1E8F5 F-box/LRR-repeat protein At5g63520-like isoform X2

1.5e-137

61.04

Show/hide

Query:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKE---------------------------
        +N    VAV+EV+ +VLSEPIRP FAIACVGVEFSLE     IT+ LGSRTPVITN+ARGIIG+DALT+EVKE                           
Subjt:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKE---------------------------

Query:  ---------------------VSQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF
                             VS+ A+ DKF+MDI D+TASVSD TSPSCII+FG QH DMKPIIAKL        VIVGDAC CFLSKS R  NE   F
Subjt:  ---------------------VSQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF

Query:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG
        SL  VALV+ARDKN P+ +GET+FH TSSTGT+PFGPELK  ST+VRGS+FTWL A             ILK L+EEIEYDDLETD+FIGV Q   QSIG
Subjt:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG

Query:  SQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLPPTSPQQNEV-------VFGGLIFSCHCRGEVYFGRP
        SQ+LGPS SLAMYK      +Y VVDGVGI+PGDSFLFYH  SETA+SSS  A E+LATL P P T+   + V       VFGGLIFSCH RG+ YFGRP
Subjt:  SQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLPPTSPQQNEV-------VFGGLIFSCHCRGEVYFGRP

Query:  NVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHI
        NVN++PFS+NFPGVP AGMF AGEIG A SRSI  EEE   DD VRRCLHVYSTVYLV+SHI
Subjt:  NVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHI

A0A6J1EDN6 F-box/LRR-repeat protein At5g63520-like isoform X1

2.6e-137

60.78

Show/hide

Query:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKE---------------------------
        +N    VAV+EV+ +VLSEPIRP FAIACVGVEFSLE     IT+ LGSRTPVITN+ARGIIG+DALT+EVKE                           
Subjt:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKE---------------------------

Query:  -----------------------VSQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQ
                               VS+ A+ DKF+MDI D+TASVSD TSPSCII+FG QH DMKPIIAKL        VIVGDAC CFLSKS R  NE  
Subjt:  -----------------------VSQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQ

Query:  RFSLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQS
         FSL  VALV+ARDKN P+ +GET+FH TSSTGT+PFGPELK  ST+VRGS+FTWL A             ILK L+EEIEYDDLETD+FIGV Q   QS
Subjt:  RFSLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQS

Query:  IGSQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLPPTSPQQNEV-------VFGGLIFSCHCRGEVYFG
        IGSQ+LGPS SLAMYK      +Y VVDGVGI+PGDSFLFYH  SETA+SSS  A E+LATL P P T+   + V       VFGGLIFSCH RG+ YFG
Subjt:  IGSQNLGPSTSLAMYK------EYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLPPTSPQQNEV-------VFGGLIFSCHCRGEVYFG

Query:  RPNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHI
        RPNVN++PFS+NFPGVP AGMF AGEIG A SRSI  EEE   DD VRRCLHVYSTVYLV+SHI
Subjt:  RPNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHI

A0A6J1GT60 F-box/LRR-repeat protein At5g63520-like

2.9e-136

57.2

Show/hide

Query:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEVS-------------------------
        +N    VAV+EVL +VLSEPIRPHFAIAC+GVEF+LE     ITK LGSRTPVITN+ARGI+G+ ALTNEVKEV                          
Subjt:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEVS-------------------------

Query:  -----------------------QGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF
                               QGAM+DKFIMDI+DFTASVSDSTSPSCII+FG   VD+KPI+AKL        VIVGDAC  FLSKS R  N  +  
Subjt:  -----------------------QGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF

Query:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG
        SLD VALVLARDK KPQG+GET FH TSSTGT+PFGPEL+  ST VRGSRFTWL A             ILKALKEEIEYDDLETDLFIGV Q    +IG
Subjt:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG

Query:  SQNLGPSTSLAMY------KEYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLP--------PTSPQQNEVVFGGLIFSCHCRGEVYFGR
        SQNLGPSTSLAMY      KEY VVDGVGI+PGDSFLFYH  S+TA+SSSY ALE+LATLKPLP         T+PQ+N+ VFGGLIFSCHCRG  YFGR
Subjt:  SQNLGPSTSLAMY------KEYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLP--------PTSPQQNEVVFGGLIFSCHCRGEVYFGR

Query:  PNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAE-------------------------------------------EEDVGDDFVRRCLHVYSTVY
        PNVNT+PF+ NFPGVP AG+F A EIG AF+RSI+ E                                           E+D   D + RCLHVYSTVY
Subjt:  PNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAE-------------------------------------------EEDVGDDFVRRCLHVYSTVY

Query:  LVMSHIE
        LVMSH +
Subjt:  LVMSHIE

A0A6J1JVL6 F-box/LRR-repeat protein At5g63520-like

4.2e-135

57.83

Show/hide

Query:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEVS-------------------------
        +N    VAV+EVL +VLSEPIRPHFAIAC+GVEF+LE     ITK LGSRTPVITN+ARGI+G+DALTNEVKEV                          
Subjt:  VNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEP----ITKPLGSRTPVITNSARGIIGIDALTNEVKEVS-------------------------

Query:  -----------------------QGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF
                               QGAM+DKFIMDI+DFTASVSDSTSPSCII+FG   VD+KPI+AKL        VIVGDAC  FLS+S R  N  +  
Subjt:  -----------------------QGAMIDKFIMDIEDFTASVSDSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRF

Query:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG
        SLD VALVLA DK KPQG+GET FH TSSTGT+PFGPEL+  ST VRGSRFTWL A             ILKALKEEI+YDDLETDLFIGV Q    +IG
Subjt:  SLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPA-------------ILKALKEEIEYDDLETDLFIGVMQEGGQSIG

Query:  SQNLGPSTSLAMY------KEYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLP--------PTSPQQNEVVFGGLIFSCHCRGEVYFGR
        SQNLGPSTSLAMY      KEY VVDGVGI+PGDSFLFYH  S+TA SSSY ALE+LATLKPLP         T+PQ N+ VFGGLIFSCHCRG  YFGR
Subjt:  SQNLGPSTSLAMY------KEYLVVDGVGIKPGDSFLFYH--SETATSSSYNALENLATLKPLP--------PTSPQQNEVVFGGLIFSCHCRGEVYFGR

Query:  PNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEE-----------------------DVGDDF-----------VRRCLHVYSTVYLVMSHIE
        PNVNT+PF+ NFPGVP AG+F A EIG AF+RSI+ EE+                       D  DD+           + R LHVYSTVYLVMSH +
Subjt:  PNVNTTPFSVNFPGVPLAGMFFAGEIGWAFSRSIQAEEE-----------------------DVGDDF-----------VRRCLHVYSTVYLVMSHIE

SwissProt top hits

e value

%identity

Alignment

Q9FMV0 F-box/LRR-repeat protein At5g63520

1.4e-39

30.73

Show/hide

Query:  AVKEVLFRVLSEPIRPHFAIA---CVGVEFSLEPITKPLGSRTPVITNSARGIIGIDALTNEVKEV----------------------------------
        A +EVL +VLSEPIRP F IA   C  +E +L  IT+ +GSR P+I +   GI+G +A  ++  EV                                  
Subjt:  AVKEVLFRVLSEPIRPHFAIA---CVGVEFSLEPITKPLGSRTPVITNSARGIIGIDALTNEVKEV----------------------------------

Query:  -------SQGAMIDKFIMDIEDFTASVS-DSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRFSLDDV----ALVLA
               S   M DKF+MDI ++ + VS  + +P+C+I+F       +P++ KL        VIVG     FL K        Q    DD+     L+ A
Subjt:  -------SQGAMIDKFIMDIEDFTASVS-DSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRFSLDDV----ALVLA

Query:  RDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPAILKALKEEIE---------YDDL---------ETDLFIGVMQEGGQSIGSQNLG
        RD+++P       F    S G      +L+  + NV  S     P+ L   K   E          DD+         E D ++GV++    SIG +   
Subjt:  RDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPAILKALKEEIE---------YDDL---------ETDLFIGVMQEGGQSIGSQNLG

Query:  PSTSLAMYKEY-------LVVDGVGIKPGDSFLFYHSETATSSSYNALENLATLKPLPPTSPQQNEVVFGGLIFSCHCRGEVYFGRPNVNTTPFSVNFPG
           S  ++ +        L+VDG GIK GD F  Y  +   + +  AL +++       + P + EVV GG  F   CRG+ +FG PN +++PF  NFP 
Subjt:  PSTSLAMYKEY-------LVVDGVGIKPGDSFLFYHSETATSSSYNALENLATLKPLPPTSPQQNEVVFGGLIFSCHCRGEVYFGRPNVNTTPFSVNFPG

Query:  VPLAGMFFAGEIGWAFSRSIQAEE-EDVGDDFVRRCLHVYSTVYLVMSH
        +P  G+F  GEIG    RS+  EE E+  +  ++R LHVYS+VYL++S+
Subjt:  VPLAGMFFAGEIGWAFSRSIQAEE-EDVGDDFVRRCLHVYSTVYLVMSH

Arabidopsis top hits

e value

%identity

Alignment

AT5G63520.1 CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FIST C domain (InterPro:IPR019494), FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast hits to 137 proteins in 56 species: Archae - 0; Bacteria - 88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

1.0e-40

30.73

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Query:  AVKEVLFRVLSEPIRPHFAIA---CVGVEFSLEPITKPLGSRTPVITNSARGIIGIDALTNEVKEV----------------------------------
        A +EVL +VLSEPIRP F IA   C  +E +L  IT+ +GSR P+I +   GI+G +A  ++  EV                                  
Subjt:  AVKEVLFRVLSEPIRPHFAIA---CVGVEFSLEPITKPLGSRTPVITNSARGIIGIDALTNEVKEV----------------------------------

Query:  -------SQGAMIDKFIMDIEDFTASVS-DSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRFSLDDV----ALVLA
               S   M DKF+MDI ++ + VS  + +P+C+I+F       +P++ KL        VIVG     FL K        Q    DD+     L+ A
Subjt:  -------SQGAMIDKFIMDIEDFTASVS-DSTSPSCIIMFGGQHVDMKPIIAKL--------VIVGDACSCFLSKSTRADNETQRFSLDDV----ALVLA

Query:  RDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPAILKALKEEIE---------YDDL---------ETDLFIGVMQEGGQSIGSQNLG
        RD+++P       F    S G      +L+  + NV  S     P+ L   K   E          DD+         E D ++GV++    SIG +   
Subjt:  RDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPAILKALKEEIE---------YDDL---------ETDLFIGVMQEGGQSIGSQNLG

Query:  PSTSLAMYKEY-------LVVDGVGIKPGDSFLFYHSETATSSSYNALENLATLKPLPPTSPQQNEVVFGGLIFSCHCRGEVYFGRPNVNTTPFSVNFPG
           S  ++ +        L+VDG GIK GD F  Y  +   + +  AL +++       + P + EVV GG  F   CRG+ +FG PN +++PF  NFP 
Subjt:  PSTSLAMYKEY-------LVVDGVGIKPGDSFLFYHSETATSSSYNALENLATLKPLPPTSPQQNEVVFGGLIFSCHCRGEVYFGRPNVNTTPFSVNFPG

Query:  VPLAGMFFAGEIGWAFSRSIQAEE-EDVGDDFVRRCLHVYSTVYLVMSH
        +P  G+F  GEIG    RS+  EE E+  +  ++R LHVYS+VYL++S+
Subjt:  VPLAGMFFAGEIGWAFSRSIQAEE-EDVGDDFVRRCLHVYSTVYLVMSH

Sequences

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CDS sequence

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ATGAATCGGTGGCGCCGCCGTGTGAATTGGTTGTTTCAGGTGGCGGTGAAGGAGGTTCTTTTTAGGGTTCTGTCGGAGCCTATTCGGCCGCACTTCGCTATTGCTTGTGT
CGGCGTGGAGTTCAGCTTGGAACCGATCACAAAGCCACTGGGCTCAAGAACTCCTGTCATAACAAACTCAGCCAGGGGCATAATCGGCATAGATGCATTAACCAATGAAG
TCAAGGAGGTATCTCAAGGAGCCATGATTGACAAGTTCATAATGGATATAGAGGATTTCACAGCTTCTGTCTCTGATTCCACATCTCCTTCCTGCATCATAATGTTTGGA
GGTCAACATGTTGATATGAAACCAATCATTGCAAAGCTAGTGATCGTGGGCGATGCCTGTAGCTGCTTTTTGAGCAAAAGTACAAGAGCCGACAACGAAACTCAAAGGTT
TTCACTTGATGACGTAGCTTTAGTACTCGCTCGTGACAAAAACAAGCCACAAGGTATAGGAGAAACAATGTTCCATATCACATCATCAACTGGAACAATGCCTTTTGGGC
CAGAGTTGAAAGTCGATTCTACGAATGTACGAGGGTCGAGGTTCACATGGCTCCCCGCCATTTTAAAGGCTCTCAAGGAAGAGATTGAATACGATGATTTGGAAACTGAC
CTGTTCATTGGGGTCATGCAAGAAGGAGGACAGAGCATTGGTTCACAAAATTTAGGTCCCTCAACATCCTTAGCAATGTATAAAGAGTATCTTGTAGTGGATGGTGTTGG
GATAAAGCCAGGAGATTCCTTCTTATTTTACCATTCAGAAACTGCTACTTCTTCTTCCTACAATGCATTGGAAAATCTTGCAACTCTAAAGCCACTGCCCCCAACTTCCC
CCCAACAGAATGAAGTAGTTTTTGGAGGCCTCATTTTCTCCTGCCACTGCCGAGGGGAGGTGTATTTTGGACGTCCAAACGTCAATACGACGCCGTTTAGTGTGAATTTC
CCCGGTGTCCCGTTGGCCGGGATGTTTTTTGCTGGGGAAATCGGCTGGGCCTTTTCTAGATCCATCCAGGCCGAGGAGGAGGATGTTGGCGATGACTTTGTTCGTCGTTG
CTTGCATGTTTATAGCACAGTTTATCTAGTGATGTCTCATATTGAAGTAGATAGAGAGTAG

mRNA sequence

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Protein sequence

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MNRWRRRVNWLFQVAVKEVLFRVLSEPIRPHFAIACVGVEFSLEPITKPLGSRTPVITNSARGIIGIDALTNEVKEVSQGAMIDKFIMDIEDFTASVSDSTSPSCIIMFG
GQHVDMKPIIAKLVIVGDACSCFLSKSTRADNETQRFSLDDVALVLARDKNKPQGIGETMFHITSSTGTMPFGPELKVDSTNVRGSRFTWLPAILKALKEEIEYDDLETD
LFIGVMQEGGQSIGSQNLGPSTSLAMYKEYLVVDGVGIKPGDSFLFYHSETATSSSYNALENLATLKPLPPTSPQQNEVVFGGLIFSCHCRGEVYFGRPNVNTTPFSVNF
PGVPLAGMFFAGEIGWAFSRSIQAEEEDVGDDFVRRCLHVYSTVYLVMSHIEVDRE

Sed0021268 (gene) of Chayote v1 genome