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Sed0021281 (gene) of Chayote v1 genome

Gene IDSed0021281
OrganismSechium edule (Chayote v1)
Descriptionprotein SPIRAL1-like 1
Genome locationLG04:528518..531339
RNA-Seq ExpressionSed0021281
SyntenySed0021281
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585249.1 Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia]9.7e-4885.27Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFG GE+PN GAPKGG+APAPAP PA      SNEG+  SKPAASKPAA ASPP +  KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

XP_022951957.1 protein SPIRAL1-like 1 [Cucurbita moschata]8.2e-4783.21Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA--------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTG
        MGRGVSSGGGQSSLGYLFG GE+PN GAPKGG+APAPAP PA        SNE +  SKPAASKPAA ASPP +  KQIPAGIHSSSSNNYLRADGQNTG
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA--------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTG

Query:  NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK

XP_022961880.1 protein SPIRAL1-like 2 [Cucurbita moschata]7.0e-4686.99Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
        MGRGVSSGGGQSSLGYLFG GEAPN GAPKGG+A      P SNEG+  SKPAASKPAA ASPPA+ TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS

Query:  TKVHAAPGGGSSLDYLFGGAGGK
        TKVHAAPGGGSSLDYLFGGAGGK
Subjt:  TKVHAAPGGGSSLDYLFGGAGGK

XP_023002715.1 protein SPIRAL1-like 1 [Cucurbita maxima]2.2e-4784.5Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFG GE+PN GAPKGG+APAPAP PA      SNEG++ SKPAA KPAA ASPP +  KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

XP_023537697.1 protein SPIRAL1-like 1 [Cucurbita pepo subsp. pepo]4.8e-4784.5Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFG GE+PN GAPKGG+APAPAP PA      SNE +  SKPAASKPAA ASPP +  KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

TrEMBL top hitse value%identityAlignment
A0A1S3BCR3 protein SPIRAL1-like 12.9e-4587.7Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPST
        GRGVSSGGGQSSLGYLFGDG+APN GAPKGGR    AP P SNEG+  SKPA SKPAA ASPPA+ TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPST
Subjt:  GRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPST

Query:  KVHAAPGGGSSLDYLFGGAGGK
        KVHAAPGGGSSLDYLFGGAGGK
Subjt:  KVHAAPGGGSSLDYLFGGAGGK

A0A6J1GJ28 protein SPIRAL1-like 14.0e-4783.21Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA--------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTG
        MGRGVSSGGGQSSLGYLFG GE+PN GAPKGG+APAPAP PA        SNE +  SKPAASKPAA ASPP +  KQIPAGIHSSSSNNYLRADGQNTG
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA--------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTG

Query:  NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK

A0A6J1HDG7 protein SPIRAL1-like 23.4e-4686.99Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
        MGRGVSSGGGQSSLGYLFG GEAPN GAPKGG+A      P SNEG+  SKPAASKPAA ASPPA+ TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS

Query:  TKVHAAPGGGSSLDYLFGGAGGK
        TKVHAAPGGGSSLDYLFGGAGGK
Subjt:  TKVHAAPGGGSSLDYLFGGAGGK

A0A6J1K972 protein SPIRAL1-like 23.4e-4686.99Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
        MGRGVSSGGGQSSLGYLFG GEAPN GAPKGG+A      P SNEG+  SKPAASKPAA ASPPA+ TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS

Query:  TKVHAAPGGGSSLDYLFGGAGGK
        TKVHAAPGGGSSLDYLFGGAGGK
Subjt:  TKVHAAPGGGSSLDYLFGGAGGK

A0A6J1KPR8 protein SPIRAL1-like 11.1e-4784.5Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFG GE+PN GAPKGG+APAPAP PA      SNEG++ SKPAA KPAA ASPP +  KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPA------SNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 12.1e-2966.94Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
        MGRGVS GGGQSSLGYLFG GEAP    P    APAP     S+E    S  A   P   A+     TKQIPAGI+ SS+NNY+RADGQNTGNF+TDRPS
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS

Query:  TKVHAAPGGGSSLDYLFGGAG
        TKVHAAPGGGSSLDYLFGG G
Subjt:  TKVHAAPGGGSSLDYLFGGAG

Q2QQ99 Protein SPIRAL1-like 37.5e-2763.03Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
        MGRGVSSGGGQSSLGYLFG GEAP         A  PAPV               KPA ++S  AE  K+IPAGI SS +NNY+RA+GQN GNF+TDRPS
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS

Query:  TKVHAAPGGGSSLDYLFGG
        TKV AAPGGGSSLDYLF G
Subjt:  TKVHAAPGGGSSLDYLFGG

Q2R0W8 Protein SPIRAL1-like 21.9e-2563.56Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPST
        GRGVSSGGGQSSLGYLFG GE     AP     PA A   A  E   A    A+  AAA+   AE  K+IPAGI S+ +NNY RA GQN GNF+TDRPST
Subjt:  GRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPST

Query:  KVHAAPGGGSSLDYLFGG
        KVHAAPGGGSSL YLFGG
Subjt:  KVHAAPGGGSSLDYLFGG

Q7Y1L9 Protein SPIRAL1-like 16.2e-2965.04Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGG---APKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSS-SSNNYLRADGQNTGNFIT
        M RG S+GGGQSSLGYLFG  EAP      AP    APAPAP PA+     A KP+ +K        A+ TKQIPAGI  S S+NNY RADGQNTGNF+T
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGG---APKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSS-SSNNYLRADGQNTGNFIT

Query:  DRPSTKVHAAPGGGSSLDYLFGG
        DRPSTKVHAAPGGGSSL YLFGG
Subjt:  DRPSTKVHAAPGGGSSLDYLFGG

Q9LE54 Protein SPIRAL1-like 21.5e-2762.18Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
        MGRGVS+GGGQSSLGYLFG GEAP        +  A    PA  E    S   A    AAA+   +  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPS
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS

Query:  TKVHAAPGGGSSLDYLFGG
        TKVH+APGGGSSLDYLFGG
Subjt:  TKVHAAPGGGSSLDYLFGG

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like11.5e-3066.94Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
        MGRGVS GGGQSSLGYLFG GEAP    P    APAP     S+E    S  A   P   A+     TKQIPAGI+ SS+NNY+RADGQNTGNF+TDRPS
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS

Query:  TKVHAAPGGGSSLDYLFGGAG
        TKVHAAPGGGSSLDYLFGG G
Subjt:  TKVHAAPGGGSSLDYLFGGAG

AT1G69230.1 SPIRAL1-like21.1e-2862.18Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
        MGRGVS+GGGQSSLGYLFG GEAP        +  A    PA  E    S   A    AAA+   +  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPS
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS

Query:  TKVHAAPGGGSSLDYLFGG
        TKVH+APGGGSSLDYLFGG
Subjt:  TKVHAAPGGGSSLDYLFGG

AT1G69230.2 SPIRAL1-like21.1e-2862.18Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS
        MGRGVS+GGGQSSLGYLFG GEAP        +  A    PA  E    S   A    AAA+   +  KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPS
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPS

Query:  TKVHAAPGGGSSLDYLFGG
        TKVH+APGGGSSLDYLFGG
Subjt:  TKVHAAPGGGSSLDYLFGG

AT2G03680.1 spiral11.1e-2561.9Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKP-------AASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGN
        MGRG S GGGQSSL YLFG G+AP   APK    P PAP PA  E  N   P        A   A  +  PAE  KQIPAGI  +  NNY RA+GQNTGN
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKP-------AASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGN

Query:  FITDRPSTKVHAAPGGGSSLDYLFGG
        F+TDRPSTKVHAAPGGGSSLDYLF G
Subjt:  FITDRPSTKVHAAPGGGSSLDYLFGG

AT2G03680.2 spiral11.1e-2561.9Show/hide
Query:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKP-------AASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGN
        MGRG S GGGQSSL YLFG G+AP   APK    P PAP PA  E  N   P        A   A  +  PAE  KQIPAGI  +  NNY RA+GQNTGN
Subjt:  MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKP-------AASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGN

Query:  FITDRPSTKVHAAPGGGSSLDYLFGG
        F+TDRPSTKVHAAPGGGSSLDYLF G
Subjt:  FITDRPSTKVHAAPGGGSSLDYLFGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCATTGGGGTATCTGTTTGGCGACGGAGAAGCTCCCAATGGGGGTGCCCCGAAGGGTGGCCGGGCACCAGCACC
AGCACCAGTACCAGCTTCTAATGAAGGGAGGAATGCATCCAAACCAGCAGCCTCCAAACCTGCTGCTGCTGCTTCACCACCTGCAGAACCTACCAAGCAGATTCCGGCTG
GTATTCACAGCAGCTCCTCAAACAACTATTTGAGGGCCGACGGTCAGAACACTGGCAATTTCATAACGGATCGACCTTCAACCAAGGTTCACGCAGCACCGGGCGGTGGA
TCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
AAATAATTTGGGAAGTATCTTGGAGAGTGCGTGCTAGGTACGAGTACACACACCGGCCCACTCATCTTCGTTCCCTCTCAAACTCTGAAGTTCGCCTCAGATCCGATCTT
CGCCGGAAGGCAAACTTCTGAGTTGTGACATTTGAAAGAAACTGAAGAACCATGGGCCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCATTGGGGTATCTGTTTGGCGA
CGGAGAAGCTCCCAATGGGGGTGCCCCGAAGGGTGGCCGGGCACCAGCACCAGCACCAGTACCAGCTTCTAATGAAGGGAGGAATGCATCCAAACCAGCAGCCTCCAAAC
CTGCTGCTGCTGCTTCACCACCTGCAGAACCTACCAAGCAGATTCCGGCTGGTATTCACAGCAGCTCCTCAAACAACTATTTGAGGGCCGACGGTCAGAACACTGGCAAT
TTCATAACGGATCGACCTTCAACCAAGGTTCACGCAGCACCGGGCGGTGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGAAAGTTGTAATAATCAAA
ACTAAATAGAGCGTATTTGAGTATCCATTTTATGTGAATTTTTATATGATGTTTGTTTGGTGGTGATGCTGCTCTGTTGTTTGGTTTTATTCAATCAAGTTGTATTTTGG
ATTCATGAAAAAAGGCTGTTTTGTGAGCTGTATTATGAATGTGTCTGTCAAGGATCTTTCTTACAAGCAATGCATAACTTTCTCTTTGCTATTATGCTCTTATTA
Protein sequenceShow/hide protein sequence
MGRGVSSGGGQSSLGYLFGDGEAPNGGAPKGGRAPAPAPVPASNEGRNASKPAASKPAAAASPPAEPTKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGG
SSLDYLFGGAGGK