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Sed0021287 (gene) of Chayote v1 genome

Gene IDSed0021287
OrganismSechium edule (Chayote v1)
DescriptionMyb_DNA-bind_3 domain-containing protein
Genome locationLG03:3278186..3278647
RNA-Seq ExpressionSed0021287
SyntenySed0021287
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134541.1 uncharacterized protein LOC111006759 [Momordica charantia]5.9e-3762.34Show/hide
Query:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC-----------------------NASRGIW------CSSSGRCNG--ELNKHKIDAN
        MKDGNHPLQVRNFEEE ASFHSP SEDLSETDDTESY G SE                         AS  +        SS  R     EL+KH IDAN
Subjt:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC-----------------------NASRGIW------CSSSGRCNG--ELNKHKIDAN

Query:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        ELLE VMEVDGLEEA+QMYAF+YLN DPVKA AFLTYN RMR+IY FRQF WWK
Subjt:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

XP_022939737.1 uncharacterized protein LOC111445529 isoform X2 [Cucurbita moschata]1.1e-3560.39Show/hide
Query:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN
        M+DGN PLQVRNF EE ASFHSP SEDLSETDDTESY G SE     N S+    +S  R +                            EL+KH IDAN
Subjt:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN

Query:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        ELLE VMEVDGLEEAKQMYAF+YLN DPVKA AFLTYN RMR+IY FRQF WWK
Subjt:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

XP_023550438.1 uncharacterized protein LOC111808583 isoform X1 [Cucurbita pepo subsp. pepo]5.0e-3661.04Show/hide
Query:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN
        MKDGN PLQVRNF EE ASFHSP SEDLSETDDTESY G SE     N S+    +S  R +                            EL+KH IDAN
Subjt:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN

Query:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        ELLE VMEVDGLEEAKQMYAF+YLN DPVKA AFLTYN RMR+IY FRQF WWK
Subjt:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

XP_023550439.1 uncharacterized protein LOC111808583 isoform X2 [Cucurbita pepo subsp. pepo]5.0e-3661.04Show/hide
Query:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN
        MKDGN PLQVRNF EE ASFHSP SEDLSETDDTESY G SE     N S+    +S  R +                            EL+KH IDAN
Subjt:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN

Query:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        ELLE VMEVDGLEEAKQMYAF+YLN DPVKA AFLTYN RMR+IY FRQF WWK
Subjt:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

XP_038885642.1 uncharacterized protein LOC120075957 [Benincasa hispida]8.5e-3661.69Show/hide
Query:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC-----------------------NASRGIW------CSSSGRCNG--ELNKHKIDAN
        MKDGNH LQVRNFEEE ASFHSP SEDLSETDDTESY G SE                         AS  +        SS  R     EL+KH IDA 
Subjt:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC-----------------------NASRGIW------CSSSGRCNG--ELNKHKIDAN

Query:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        ELLE VMEVDGLEEAKQMYAF+YLN DPVKA AFLTYN RMR+IY FRQF WWK
Subjt:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

TrEMBL top hitse value%identityAlignment
A0A0A0K8L4 Myb_DNA-bind_3 domain-containing protein9.2e-3660.39Show/hide
Query:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAG----------------------------LSECNASRGIWCSSSGRCNG---ELNKHKIDAN
        MKDGNH LQVRNFEEE ASFHSP SEDLSETD+TESY G                             SE      +  +SS R      EL+KH IDAN
Subjt:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAG----------------------------LSECNASRGIWCSSSGRCNG---ELNKHKIDAN

Query:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        ELLE VMEVDGLEEAKQMYAF+YLN DPVKA AFLTYN RMR+IY FRQF WWK
Subjt:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

A0A6J1BY25 uncharacterized protein LOC1110067592.9e-3762.34Show/hide
Query:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC-----------------------NASRGIW------CSSSGRCNG--ELNKHKIDAN
        MKDGNHPLQVRNFEEE ASFHSP SEDLSETDDTESY G SE                         AS  +        SS  R     EL+KH IDAN
Subjt:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC-----------------------NASRGIW------CSSSGRCNG--ELNKHKIDAN

Query:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        ELLE VMEVDGLEEA+QMYAF+YLN DPVKA AFLTYN RMR+IY FRQF WWK
Subjt:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

A0A6J1FGR7 uncharacterized protein LOC111445529 isoform X15.4e-3660.39Show/hide
Query:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN
        M+DGN PLQVRNF EE ASFHSP SEDLSETDDTESY G SE     N S+    +S  R +                            EL+KH IDAN
Subjt:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN

Query:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        ELLE VMEVDGLEEAKQMYAF+YLN DPVKA AFLTYN RMR+IY FRQF WWK
Subjt:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

A0A6J1FHN7 uncharacterized protein LOC111445529 isoform X25.4e-3660.39Show/hide
Query:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN
        M+DGN PLQVRNF EE ASFHSP SEDLSETDDTESY G SE     N S+    +S  R +                            EL+KH IDAN
Subjt:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN

Query:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        ELLE VMEVDGLEEAKQMYAF+YLN DPVKA AFLTYN RMR+IY FRQF WWK
Subjt:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

A0A6J1JY58 uncharacterized protein LOC111488942 isoform X21.2e-3559.74Show/hide
Query:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN
        MKDGN PLQVRNF EE ASFHSP SEDLSETDDTESY G SE     N S+    +S  R +                            EL+KH IDAN
Subjt:  MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSEC----NASRGIWCSSSGRCNG---------------------------ELNKHKIDAN

Query:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        ELLE VME+DGLEEAKQMYAF+YLN +PVKA AFLTYN RMR+IY FRQF WWK
Subjt:  ELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02550.1 unknown protein5.2e-2343.79Show/hide
Query:  KDGNHPL-QVRNFEEEPASFHSPCSEDLSETDDTESYAGLSE----------------------------CNASRGIWCSSSGRCNGEL--NKHKIDANE
        K+ +H L  V+ FEE+  SF    SE+ S+TD TESYAG SE                            C  +  +  SS  R    +  +K  I+  E
Subjt:  KDGNHPL-QVRNFEEEPASFHSPCSEDLSETDDTESYAGLSE----------------------------CNASRGIWCSSSGRCNGEL--NKHKIDANE

Query:  LLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        LL+ VME+D LEEAKQMYAF+YLN DPVKA AF+ YN RMR+++ FRQF WWK
Subjt:  LLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

AT4G02550.2 unknown protein1.6e-1944.96Show/hide
Query:  SEDLSETDDTESYAGLSE----------------------------CNASRGIWCSSSGRCNGEL--NKHKIDANELLETVMEVDGLEEAKQMYAFKYLN
        SE+ S+TD TESYAG SE                            C  +  +  SS  R    +  +K  I+  ELL+ VME+D LEEAKQMYAF+YLN
Subjt:  SEDLSETDDTESYAGLSE----------------------------CNASRGIWCSSSGRCNGEL--NKHKIDANELLETVMEVDGLEEAKQMYAFKYLN

Query:  VDPVKALAFLTYNTRMRRIYPFRQFLWWK
         DPVKA AF+ YN RMR+++ FRQF WWK
Subjt:  VDPVKALAFLTYNTRMRRIYPFRQFLWWK

AT4G02550.3 unknown protein5.2e-2343.79Show/hide
Query:  KDGNHPL-QVRNFEEEPASFHSPCSEDLSETDDTESYAGLSE----------------------------CNASRGIWCSSSGRCNGEL--NKHKIDANE
        K+ +H L  V+ FEE+  SF    SE+ S+TD TESYAG SE                            C  +  +  SS  R    +  +K  I+  E
Subjt:  KDGNHPL-QVRNFEEEPASFHSPCSEDLSETDDTESYAGLSE----------------------------CNASRGIWCSSSGRCNGEL--NKHKIDANE

Query:  LLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK
        LL+ VME+D LEEAKQMYAF+YLN DPVKA AF+ YN RMR+++ FRQF WWK
Subjt:  LLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRMRRIYPFRQFLWWK

AT4G02550.4 unknown protein1.6e-1944.96Show/hide
Query:  SEDLSETDDTESYAGLSE----------------------------CNASRGIWCSSSGRCNGEL--NKHKIDANELLETVMEVDGLEEAKQMYAFKYLN
        SE+ S+TD TESYAG SE                            C  +  +  SS  R    +  +K  I+  ELL+ VME+D LEEAKQMYAF+YLN
Subjt:  SEDLSETDDTESYAGLSE----------------------------CNASRGIWCSSSGRCNGEL--NKHKIDANELLETVMEVDGLEEAKQMYAFKYLN

Query:  VDPVKALAFLTYNTRMRRIYPFRQFLWWK
         DPVKA AF+ YN RMR+++ FRQF WWK
Subjt:  VDPVKALAFLTYNTRMRRIYPFRQFLWWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGATGGAAACCATCCGCTGCAGGTCAGGAATTTTGAAGAAGAGCCTGCATCATTTCACTCCCCATGCTCTGAAGATCTCAGCGAAACAGACGATACGGAGTCGTA
CGCTGGGCTGTCCGAATGCAATGCTAGCCGTGGCATCTGGTGTTCGTCGTCTGGCCGATGCAATGGAGAACTAAACAAACACAAGATAGATGCCAATGAACTCTTAGAAA
CCGTGATGGAGGTTGACGGTTTAGAGGAGGCAAAACAGATGTATGCCTTCAAATATTTGAACGTGGATCCGGTGAAAGCCTTAGCGTTCTTGACATATAACACTCGGATG
AGGAGAATTTATCCGTTTCGCCAGTTTTTGTGGTGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGATGGAAACCATCCGCTGCAGGTCAGGAATTTTGAAGAAGAGCCTGCATCATTTCACTCCCCATGCTCTGAAGATCTCAGCGAAACAGACGATACGGAGTCGTA
CGCTGGGCTGTCCGAATGCAATGCTAGCCGTGGCATCTGGTGTTCGTCGTCTGGCCGATGCAATGGAGAACTAAACAAACACAAGATAGATGCCAATGAACTCTTAGAAA
CCGTGATGGAGGTTGACGGTTTAGAGGAGGCAAAACAGATGTATGCCTTCAAATATTTGAACGTGGATCCGGTGAAAGCCTTAGCGTTCTTGACATATAACACTCGGATG
AGGAGAATTTATCCGTTTCGCCAGTTTTTGTGGTGGAAATGA
Protein sequenceShow/hide protein sequence
MKDGNHPLQVRNFEEEPASFHSPCSEDLSETDDTESYAGLSECNASRGIWCSSSGRCNGELNKHKIDANELLETVMEVDGLEEAKQMYAFKYLNVDPVKALAFLTYNTRM
RRIYPFRQFLWWK