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Sed0021298 (gene) of Chayote v1 genome

Gene IDSed0021298
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:5940023..5941097
RNA-Seq ExpressionSed0021298
SyntenySed0021298
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461069.1 PREDICTED: uncharacterized protein LOC103499770 [Cucumis melo]2.6e-4580.33Show/hide
Query:  MATNLPVFHPAPIRAS---STGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADL-PVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFH
        MATN  VFHP PIRAS   S+GKS+PNRR +A PKWWSPIFGWSSEPDYV SSAA++  VQNADPE+DGG   SRF PGCFTEEKAK+LRMKT ESSTFH
Subjt:  MATNLPVFHPAPIRAS---STGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADL-PVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFH

Query:  DIMYHSAIASRLASDLSDRSNK
        DIMYHSAIASRLASDLSDRS K
Subjt:  DIMYHSAIASRLASDLSDRSNK
XP_022960101.1 uncharacterized protein LOC111460952 [Cucurbita moschata]1.4e-5186.44Show/hide
Query:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY
        MATNLPVFH APIRASS+GKSEPNRR +AAPKWWSPIFGWSSEPDY+GSSAAD PVQNADPE+DGG  +S+F PGCFTEEKAK+LRMKT ESSTFHDIMY
Subjt:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY

Query:  HSAIASRLASDLSDRSNK
        HSAIASRLASDLSDRS +
Subjt:  HSAIASRLASDLSDRSNK
XP_023004861.1 uncharacterized protein LOC111498038 [Cucurbita maxima]4.8e-5287.29Show/hide
Query:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY
        MATNLPVFH APIRASS+GKSEPNRR +AAPKWWSPIFGWSSEPDY+GSSAAD PVQNADPE+DGG A+S+F PGCFTEEKAK+LRMKT ESSTFHDIMY
Subjt:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY

Query:  HSAIASRLASDLSDRSNK
        HSAIASRLASDLSDRS +
Subjt:  HSAIASRLASDLSDRSNK
XP_023514525.1 uncharacterized protein LOC111778781 [Cucurbita pepo subsp. pepo]2.6e-5085.59Show/hide
Query:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY
        MATNLPVFH APIRASS+GKSEPNRR +AAPKWWSPIFGWSSEPDY+GSSAAD  VQNADPE+DGG  +S+F PGCFTEEKAK+LRMKT ESSTFHDIMY
Subjt:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY

Query:  HSAIASRLASDLSDRSNK
        HSAIASRLASDLSDRS +
Subjt:  HSAIASRLASDLSDRSNK
XP_038898524.1 uncharacterized protein LOC120086132 [Benincasa hispida]2.5e-4883.9Show/hide
Query:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY
        MATNL VFHPAPIRASS+GKSEPNRR + APKWWSPIFGWSSEPDYV SSAA+  V NA+PE++GG  RSRF PGCFTEEKAK+LRMKT ESSTFHDIMY
Subjt:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY

Query:  HSAIASRLASDLSDRSNK
        HSAIASRLASDLSDRS K
Subjt:  HSAIASRLASDLSDRSNK
TrEMBL top hitse value%identityAlignment
A0A0A0K8X0 Uncharacterized protein6.8e-4476.19Show/hide
Query:  MATNLPVFHPAPIRA-------SSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADL-PVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSES
        MATN  VFHPAPI A       SS+GK +PNR  +AAPKWWSPIFGWSSEPDYV SSAA++  +QNADPE+ GG  RSRF PGCFTEEKAK+LRMKT ES
Subjt:  MATNLPVFHPAPIRA-------SSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADL-PVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSES

Query:  STFHDIMYHSAIASRLASDLSDRSNK
        STFHDIMYHSAIASRLASDLSDRS K
Subjt:  STFHDIMYHSAIASRLASDLSDRSNK
A0A1S3CEC0 uncharacterized protein LOC1034997701.2e-4580.33Show/hide
Query:  MATNLPVFHPAPIRAS---STGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADL-PVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFH
        MATN  VFHP PIRAS   S+GKS+PNRR +A PKWWSPIFGWSSEPDYV SSAA++  VQNADPE+DGG   SRF PGCFTEEKAK+LRMKT ESSTFH
Subjt:  MATNLPVFHPAPIRAS---STGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADL-PVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFH

Query:  DIMYHSAIASRLASDLSDRSNK
        DIMYHSAIASRLASDLSDRS K
Subjt:  DIMYHSAIASRLASDLSDRSNK
A0A5D3CF29 Uncharacterized protein1.2e-4580.33Show/hide
Query:  MATNLPVFHPAPIRAS---STGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADL-PVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFH
        MATN  VFHP PIRAS   S+GKS+PNRR +A PKWWSPIFGWSSEPDYV SSAA++  VQNADPE+DGG   SRF PGCFTEEKAK+LRMKT ESSTFH
Subjt:  MATNLPVFHPAPIRAS---STGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADL-PVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFH

Query:  DIMYHSAIASRLASDLSDRSNK
        DIMYHSAIASRLASDLSDRS K
Subjt:  DIMYHSAIASRLASDLSDRSNK
A0A6J1H6P9 uncharacterized protein LOC1114609526.8e-5286.44Show/hide
Query:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY
        MATNLPVFH APIRASS+GKSEPNRR +AAPKWWSPIFGWSSEPDY+GSSAAD PVQNADPE+DGG  +S+F PGCFTEEKAK+LRMKT ESSTFHDIMY
Subjt:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY

Query:  HSAIASRLASDLSDRSNK
        HSAIASRLASDLSDRS +
Subjt:  HSAIASRLASDLSDRSNK
A0A6J1KTB2 uncharacterized protein LOC1114980382.3e-5287.29Show/hide
Query:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY
        MATNLPVFH APIRASS+GKSEPNRR +AAPKWWSPIFGWSSEPDY+GSSAAD PVQNADPE+DGG A+S+F PGCFTEEKAK+LRMKT ESSTFHDIMY
Subjt:  MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMY

Query:  HSAIASRLASDLSDRSNK
        HSAIASRLASDLSDRS +
Subjt:  HSAIASRLASDLSDRSNK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52720.1 unknown protein5.0e-2351.92Show/hide
Query:  IRASS-TGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMYHSAIASRLASD
        IRASS +G   P++    +  WW+P+FG  S+PDY+   ++   V     +I G G   +F  GCFTEEKAK LR KT+E+STFHD+MYHSAIASRLASD
Subjt:  IRASS-TGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMYHSAIASRLASD

Query:  LSDR
        ++ R
Subjt:  LSDR
AT3G15630.1 unknown protein5.2e-2050.44Show/hide
Query:  MATNLPVFHPAPIRASSTGKSEPNRRIS-AAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIM
        MAT +     + IRASS  +S+P R+   ++  WW+P+FG SSEPDYV  +       N + ++D   A  R    C TEEKAK LR KT+E+STFHD+M
Subjt:  MATNLPVFHPAPIRASSTGKSEPNRRIS-AAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIM

Query:  YHSAIASRLASDL
        YHSAIASRLASD+
Subjt:  YHSAIASRLASDL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCAATCTTCCCGTTTTCCATCCCGCTCCGATCAGAGCTTCTTCCACCGGAAAATCCGAACCTAATCGCCGGATTTCCGCCGCGCCGAAGTGGTGGTCACCGAT
CTTCGGCTGGTCCTCCGAGCCGGACTACGTCGGTTCCTCCGCCGCGGATCTGCCGGTTCAGAATGCCGATCCGGAAATCGACGGCGGAGGAGCAAGATCCAGATTCACGC
CTGGATGCTTCACGGAGGAGAAGGCGAAAATGCTCCGGATGAAGACGTCGGAGAGCTCTACGTTTCACGACATTATGTACCACTCGGCGATCGCGTCGCGTCTCGCCTCC
GATTTGTCGGATCGGAGCAACAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
GTCAAATTCATTTATCCTTTTATCCCTACTTTTAAGCTTCTTCCATGGCGACCAATCTTCCCGTTTTCCATCCCGCTCCGATCAGAGCTTCTTCCACCGGAAAATCCGAA
CCTAATCGCCGGATTTCCGCCGCGCCGAAGTGGTGGTCACCGATCTTCGGCTGGTCCTCCGAGCCGGACTACGTCGGTTCCTCCGCCGCGGATCTGCCGGTTCAGAATGC
CGATCCGGAAATCGACGGCGGAGGAGCAAGATCCAGATTCACGCCTGGATGCTTCACGGAGGAGAAGGCGAAAATGCTCCGGATGAAGACGTCGGAGAGCTCTACGTTTC
ACGACATTATGTACCACTCGGCGATCGCGTCGCGTCTCGCCTCCGATTTGTCGGATCGGAGCAACAAGAAATAGATCGGCGATCGAAGCTTGGCGCAGTGAGGTATTGTA
TTGTGTTTTTGGAAATCTGTATCTGCACCGCCTCTCTTTGTAAACCGTCGGAACCTAAAATTTGGGGGAAATGATGTTGGATCTTCATTTTCTGACTAATTTACTGCTTA
GTTTTGGCTTTTAGATGGTGTAGATTGCTGAAACTCTAAACCTTCTGAAATTTTCTTGCGTCTGATTTGTGATTGACGACGATTGTTTTGGAATTGTTGTTTGATTATAA
ACACAGTCTATTTGGATCATAGAGACAGTTGCAGATGAATCATTTCTTTTGATGTTTACGGCCTTGAAATCTTCGCCGACTTTTTTTTTGAACAATGAAAATGATTATTA
AATGTGATGCTCTTGCCCTAACGATTTCTACTCAGAGTCGAGAATGATTTAGATCTGCGCCGTTTTAATTCTGTTCTTCATTGGAGTTTTCTTTTTGAAATAATTCCTAA
TTGATCTATTTATAGAAGGGGAATTATATGAATTTTGCAATTTTGTTCTTGTACTGTAAAATGATCAATTAACGAAGAAGAGATTATTACATTTGGCTGCTCTTTTGAGA
ATTTAAATCATTACTTTATATATATATATCAAATAAAAATGCTACAGAATCTGATGCCTTTGAGGTGTTCATTTGCAAGAATTTA
Protein sequenceShow/hide protein sequence
MATNLPVFHPAPIRASSTGKSEPNRRISAAPKWWSPIFGWSSEPDYVGSSAADLPVQNADPEIDGGGARSRFTPGCFTEEKAKMLRMKTSESSTFHDIMYHSAIASRLAS
DLSDRSNKK