; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0021312 (gene) of Chayote v1 genome

Gene IDSed0021312
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L29
Genome locationLG04:32204843..32207081
RNA-Seq ExpressionSed0021312
SyntenySed0021312
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013674.1 60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-2398.36Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKS ETGSEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

XP_022138412.1 60S ribosomal protein L29-1-like [Momordica charantia]1.9e-2298.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAET SEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEE

XP_022959482.1 60S ribosomal protein L29-1-like [Cucurbita moschata]3.8e-2398.36Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKS ETGSEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

XP_023000055.1 60S ribosomal protein L29-1 [Cucurbita maxima]1.9e-2296.72Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKS ET SEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

XP_023000056.1 60S ribosomal protein L29-1-like [Cucurbita maxima]2.4e-2295.08Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKS E+G+EEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

TrEMBL top hitse value%identityAlignment
A0A6J1CB13 60S ribosomal protein L299.0e-2398.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAET SEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEE

A0A6J1H4N3 60S ribosomal protein L291.8e-2398.36Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKS ETGSEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

A0A6J1KET9 60S ribosomal protein L291.2e-2295.08Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKS E+G+EEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

A0A6J1KHA4 60S ribosomal protein L299.0e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKS ET SEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

A0A6J1L4P4 60S ribosomal protein L291.8e-2398.36Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKS ETGSEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L296.7e-1578.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q58DW3 60S ribosomal protein L296.7e-1578.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q84WM0 60S ribosomal protein L29-29.0e-2080.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KS E    EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

Q8HXB8 60S ribosomal protein L296.7e-1578.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q9M7X7 60S ribosomal protein L29-15.3e-2080.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+ E  S EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family4.9e-2171.23Show/hide
Query:  PSLQLPQYLSRAMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        P  QL   +   MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KS E    EE
Subjt:  PSLQLPQYLSRAMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

AT3G06680.2 Ribosomal L29e protein family6.4e-2180.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KS E    EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

AT3G06700.1 Ribosomal L29e protein family3.7e-2180.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+ E  S EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

AT3G06700.2 Ribosomal L29e protein family3.7e-2180.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+ E  S EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE

AT3G06700.3 Ribosomal L29e protein family3.7e-2180.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+ E  S EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGATGTTGGACATATAAAAAGGGTGAACTTCCACCACCAGTTAACAGAGGCGGCAGAAACCCTAGCTTGCAACTTCCGCAGTATCTCTCAAGAGCAATGGCGAA
GTCGAAGAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAGGAATGGCATCAAGAAGCCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGACCCGAAGTTTT
TGAGGAACCAGAGGTACGCCAAAAAGCACAACAACAAGAGTGCTGAAACCGGTTCTGAGGAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAGATGTTGGACATATAAAAAGGGTGAACTTCCACCACCAGTTAACAGAGGCGGCAGAAACCCTAGCTTGCAACTTCCGCAGTATCTCTCAAGAGCAATGGCGAA
GTCGAAGAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAGGAATGGCATCAAGAAGCCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGACCCGAAGTTTT
TGAGGAACCAGAGGTACGCCAAAAAGCACAACAACAAGAGTGCTGAAACCGGTTCTGAGGAAGAGTAAATTAGAATGTTATAAGTTTGAATTTGCAGTTTGTTTCGATTG
AACATTTTTTTATATATCTCTGCCTTGTTTTTGTTCACTAGTGTAGTAAATTTTGCTATGATTTAGACTGCCGATTATCTGTTTTGAATTGTCTACATTTTAGTGAATGG
TTATGTTGTGCTTTCTATTTATAATCCTATGTCTGTGGAAGCTATATGGTTAAGATAAATTTATTTTTAGGAACTCATTTCAGTAGTTAAATGAAAAGCACGCAACCCTA
TTGTAGACTCATTGATTTATTAGTCTAAAGCTTATACCTCGATCATATTCTAAACTTGAACTAGATAGAATGACTTTAGATTTTGTAACGAAGACTCAAATGACATTCAC
ACAAAACACTTATTTTGTTGTTTAATTTCTTGATATTGTTGTTTAACTATTATTTGTGTTTGTGTTTGTTCTTCTATTATCACTTTTTTTTCCCTTGTGAGAGTTGGTAT
AACTGTAGTACAGTCTGTGATGTTACTTTCAAGTTTACCAACTCTGTAGTTGCAATTCATGGTACTCAATTGTCTCCAAGGGGTGGCACATTGGTTGAAGACTAGGCTTT
GAGGGTATGTTCCATCAAGGTTCTGGGTTTGAGACTCAACTGTGATATTACTCATTTTATGTCTTTGTTGTTTGTCCTAGGGATAGGTGTGGTTACCCTTGTTTCAAAAA
AAATTCACGGTACTCAACCATGCACTGGTAACATGTTTGTCAAGTAACTAACATTAAGGTACATGATTTTTCATTAGATGCTTGTGAAGATTTAATCTAATAATGCATGT
GTATATGCTTGATTAGCTTCGTAAATTAAACCCCATCTTAGCTTTGTGGTATACCTGAGATTTTTTCTTTCTTAGGAAGTCTTCATTAGAAATCCTTTAATATACTGAGA
GGCCTTTCCCCAATGGGCGGTCTAGGTTTGAAATCCACTTAGTAGTAAACTTTCTTGTTGTTTGAGTGTAGAGGCCTTAGGTGTTCTACAGTCCTCAAAGGGTGGGGAAT
GGTGGTCTAAGGACTGAAGGTGTTCCCTTGAGGTCTTAAGTTTGAGATTAGTTTGTGGCATTAATTTGTAGACTCCCTTTTGTTTTTTCATTCTTTTGATGCCTCTCGAT
AACTGGTACGTTGTGTATAGTGGGATGAATCTCAAAAATGGTGTTCTACAACTTTGAATTTTATTGGTTGTAAATATGTGAGCACGAGTTCTTTAATCAAAAGACTTTTA
TTGACATTCTTTGAATTTTGACATCGAGGGTTTGTCTGTTTTTGGCTTTGGTTCAACAATGAGAATTAGGAGGCACACTTTGGCACTCGAGGATTATTCTTGACGAGAAA
GATTTTGGTGCAGCCATCAAATTATGCAAGTGGTGTGGCTCATTAAGAGTTACAAATTTTTTTTTTAATCTCCTTTTGTTTTAAAGGGATTCCATTTTTTTGTGTGGTGC
AGCTGGTTGCATCCAAATCTTTCTCATTCTTGACCTACATAACTTCGAGAAAAAAGAGGTCTTGAGATCATGATGTCAAACTCTTTTTTACTTTTTCTTCCCTTTTTTTT
TTTTTTCTTTTACATATATTTTCCGTATATAGAGCCTCGCAAGCTGTAATTTTGTATCCTTGTTCTAATATAAACAAAAGTAGTTCCTTTGTTTTTTTTTAAATAAAA
Protein sequenceShow/hide protein sequence
MTRCWTYKKGELPPPVNRGGRNPSLQLPQYLSRAMAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETGSEEE