; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0021324 (gene) of Chayote v1 genome

Gene IDSed0021324
OrganismSechium edule (Chayote v1)
DescriptionHMG-Y-related protein A
Genome locationLG03:6825281..6826353
RNA-Seq ExpressionSed0021324
SyntenySed0021324
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR000116 - High mobility group protein HMGA
IPR005818 - Linker histone H1/H5, domain H15
IPR017956 - AT hook, DNA-binding motif
IPR031059 - High mobility group protein HMGA, plant
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150116.1 HMG-Y-related protein A [Cucumis sativus]3.7e-8387.1Show/hide
Query:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP
        MATDDQ NNPP PPP   SLPHYPEMIMAAID+LNDKNG +KSAITKQIES+YGDLPPAF TLLTHHLDVMKQTGQLLF+KN+YMKPDPNA PKRGRGRP
Subjt:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP

Query:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVP-SAVPVAGPSRGRGRPPKVKPAVVPVGC
        PKPK  LP   VVSPPRPRGRPPKPKDPFAPISQPKKKT+SGSGRPRGRPPKYPKP P SA PVAGP RGRGRPPKVKPAV PVGC
Subjt:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVP-SAVPVAGPSRGRGRPPKVKPAVVPVGC

XP_008466945.1 PREDICTED: HMG-Y-related protein A [Cucumis melo]2.8e-8387.63Show/hide
Query:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP
        MATDDQ NNPP PPP   SLPHYPEMIMAAID+LNDKNG +KSAITKQIES+YGDLPPAF TLLTHHLDVMKQTGQLLFVKN+YMKPDPNA PKRGRGRP
Subjt:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP

Query:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVP-SAVPVAGPSRGRGRPPKVKPAVVPVGC
        PKPK  LP   VVSPPRPRGRPPKPKDPFAPISQPKKKT+SGSGRPRGRPPKYPKP P SA PVAGP RGRGRPPKVKPAV PVGC
Subjt:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVP-SAVPVAGPSRGRGRPPKVKPAVVPVGC

XP_022953026.1 HMG-Y-related protein B-like [Cucurbita moschata]1.3e-8083.78Show/hide
Query:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP
        MAT DQ NNPP PPP   SLPHYPEMIM+AIDALNDKNG +KS +TKQIES+YGDLPPAF TLLTHHLDVMKQTGQLLFVKN+YMKPDPNA PKRGRGRP
Subjt:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP

Query:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRPPKVKPAVVPVGC
        PKPK  LP   VVSPPRPRGRPPK +DPFAPISQPKKK SSGSGRPRGRPPKYPKP P++VPVA P RGRGRPPK+KPAV PVGC
Subjt:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRPPKVKPAVVPVGC

XP_023545599.1 HMG-Y-related protein B-like [Cucurbita pepo subsp. pepo]5.9e-8183.78Show/hide
Query:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP
        MAT DQ+NNPP PPP   SLPHYPEMIM+AIDALNDKNG +KS +TKQIES+YGDLPPAF TLLTHHLDVMKQTGQLLFVKN+YMKPDPNA PKRGRGRP
Subjt:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP

Query:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRPPKVKPAVVPVGC
        PKPK  LP   VVSPPRPRGRPPK +DPFAPISQPKKK SSGSGRPRGRPPKYPKP P++VPVA P RGRGRPPK+KPAV PVGC
Subjt:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRPPKVKPAVVPVGC

XP_038906720.1 HMG-Y-related protein A-like [Benincasa hispida]8.2e-8385.41Show/hide
Query:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP
        MATDDQ NNPP PPP   SLPHYPEMIM AI++LNDKNG +KSAITKQIES+YGDLPPAF TLLTHHLDVMKQTGQLLFVKN+YMKPDPNA PKRGRGRP
Subjt:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP

Query:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRPPKVKPAVVPVGC
        PKPK  LP   VVSPPRPRGRPPKPKDPFAPISQPKKKT+ GSGRPRGRPPKYPKP P++ PVAGP RGRGRPPKVKPAV PVGC
Subjt:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRPPKVKPAVVPVGC

TrEMBL top hitse value%identityAlignment
A0A0A0KPG4 H15 domain-containing protein1.8e-8387.1Show/hide
Query:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP
        MATDDQ NNPP PPP   SLPHYPEMIMAAID+LNDKNG +KSAITKQIES+YGDLPPAF TLLTHHLDVMKQTGQLLF+KN+YMKPDPNA PKRGRGRP
Subjt:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP

Query:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVP-SAVPVAGPSRGRGRPPKVKPAVVPVGC
        PKPK  LP   VVSPPRPRGRPPKPKDPFAPISQPKKKT+SGSGRPRGRPPKYPKP P SA PVAGP RGRGRPPKVKPAV PVGC
Subjt:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVP-SAVPVAGPSRGRGRPPKVKPAVVPVGC

A0A1S3CSD8 HMG-Y-related protein A1.4e-8387.63Show/hide
Query:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP
        MATDDQ NNPP PPP   SLPHYPEMIMAAID+LNDKNG +KSAITKQIES+YGDLPPAF TLLTHHLDVMKQTGQLLFVKN+YMKPDPNA PKRGRGRP
Subjt:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP

Query:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVP-SAVPVAGPSRGRGRPPKVKPAVVPVGC
        PKPK  LP   VVSPPRPRGRPPKPKDPFAPISQPKKKT+SGSGRPRGRPPKYPKP P SA PVAGP RGRGRPPKVKPAV PVGC
Subjt:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVP-SAVPVAGPSRGRGRPPKVKPAVVPVGC

A0A5D3E3W3 HMG-Y-related protein A1.4e-8387.63Show/hide
Query:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP
        MATDDQ NNPP PPP   SLPHYPEMIMAAID+LNDKNG +KSAITKQIES+YGDLPPAF TLLTHHLDVMKQTGQLLFVKN+YMKPDPNA PKRGRGRP
Subjt:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP

Query:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVP-SAVPVAGPSRGRGRPPKVKPAVVPVGC
        PKPK  LP   VVSPPRPRGRPPKPKDPFAPISQPKKKT+SGSGRPRGRPPKYPKP P SA PVAGP RGRGRPPKVKPAV PVGC
Subjt:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVP-SAVPVAGPSRGRGRPPKVKPAVVPVGC

A0A6J1GLV6 HMG-Y-related protein B-like6.4e-8183.78Show/hide
Query:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP
        MAT DQ NNPP PPP   SLPHYPEMIM+AIDALNDKNG +KS +TKQIES+YGDLPPAF TLLTHHLDVMKQTGQLLFVKN+YMKPDPNA PKRGRGRP
Subjt:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP

Query:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRPPKVKPAVVPVGC
        PKPK  LP   VVSPPRPRGRPPK +DPFAPISQPKKK SSGSGRPRGRPPKYPKP P++VPVA P RGRGRPPK+KPAV PVGC
Subjt:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRPPKVKPAVVPVGC

A0A6J1JSA2 HMG-Y-related protein B-like6.4e-8183.78Show/hide
Query:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP
        MAT DQ NNPP PPP   SLPHYPEMIM+AIDALNDKNG +KS +TKQIES+YGDLPPAF TLLTHHLDVMKQTGQLLFVKN+YMKPDPNA PKRGRGRP
Subjt:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRP

Query:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRPPKVKPAVVPVGC
        PKPK  LP   VVSPPRPRGRPPK +DPFAPISQPKKK SSGSGRPRGRPPKYPKP P++VPVA P RGRGRPPK+KPAV PVGC
Subjt:  PKPKSALPEDAVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRPPKVKPAVVPVGC

SwissProt top hitse value%identityAlignment
Q00423 HMG-Y-related protein A9.2e-4562.05Show/hide
Query:  SLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRPPKPKSALPEDAVVSPPRP
        SLP YPEMI+  ++ALN+ NG+NKSAI+K IE++YG+LP A  T+L  HL+ MK +G+L F +N+YMK DPNA PKRGRGRPPKPK+ LP   VVSPPRP
Subjt:  SLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRPPKPKSALPEDAVVSPPRP

Query:  RGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPS-RGRGRPPKVKPAVVPV
        RGRP  PKDP AP   PK K + GSGRPRGRP K P+    A P A  S R RGRPPKVKP +  V
Subjt:  RGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPS-RGRGRPPKVKPAVVPV

Q10370 HMG-Y-related protein B (Fragment)3.5e-3658.06Show/hide
Query:  ALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRPPKPKSALPEDAVVSPPRPRGRPPKPKDPFAPI
        ALN+ +G+NKSAI+K IE++YG+LP   +T+L  HL+ MK++G+L F +N+YMK DPNA PKRGRGRPPKPK  LP   VVSPPRPRGRP  PKDP AP 
Subjt:  ALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRPPKPKSALPEDAVVSPPRPRGRPPKPKDPFAPI

Query:  SQPKKKTSSGSGRPRGRPPKYPK----PVPSAVPVAGPSRGRGRPPKVKPAVVPV
          PK K +  +GRPRGRP K  +    P P+AV    P   RGRPPKVKP +  V
Subjt:  SQPKKKTSSGSGRPRGRPPKYPK----PVPSAVPVAGPSRGRGRPPKVKPAVVPV

Q43386 HMG-Y-related protein A6.4e-4659.89Show/hide
Query:  SLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRPPKPKSALPEDA-------
        SLP YP+MIM AI++LNDKNG NK+ I K IES+   LPP+  TLL++HL+ MK+TGQL+ VKN+YMKPDP+A PKRGRGRPPK K+    DA       
Subjt:  SLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRPPKPKSALPEDA-------

Query:  --VVS--PPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPK--------PVPSAVPVAGPSRGRGRPPKVKPAVV-PVGC
          VVS  PPR RGRPPKPKDP  P   P++K  +GSGRPRGRPPK P+        P P+A    G  RGRGRPPKVKP VV PVGC
Subjt:  --VVS--PPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPK--------PVPSAVPVAGPSRGRGRPPKVKPAVV-PVGC

Q9FYS5 HMG-Y-related protein A6.2e-3349.75Show/hide
Query:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPD-PNAQPKRGRGR
        MATD+    P P PP       YPEMI+AAI+ L+DK+G+NKSAI+K IE  YG LPPA  +LLT HL  MK++G+L+F+KN+Y +   P+A PKRGRGR
Subjt:  MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPD-PNAQPKRGRGR

Query:  PPKPKSA-LPEDAVVSPP---RPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPK--------YPKPVPSAVPVAGPS----RGRGRPPKVKPAV
        PPK +    P  A  SP    R RGRPPK K   +P+    K+ ++G  +PRGRPPK         P P P+  P    S    RGRGRPPKV+PAV
Subjt:  PPKPKSA-LPEDAVVSPP---RPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPK--------YPKPVPSAVPVAGPS----RGRGRPPKVKPAV

Q9M5W4 Histone H16.5e-0631.05Show/hide
Query:  PPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRPPKPKSALPEDA
        P     SS P + EMI  AI  L ++ G+++ AI K +E  +  LP  F  LL  HL  +  +G+L+ VKNS+  P   A P     + P     +P+  
Subjt:  PPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRPPKPKSALPEDA

Query:  VVSPPRPR--GRPPKPKDPFA--------------PISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRP-PKVKPAVVPVG
        V + P+    G  PK K   A              P ++PK KT   +G+P+    K P  V     VA P + +  P  KVK    P G
Subjt:  VVSPPRPR--GRPPKPKDPFA--------------PISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRP-PKVKPAVVPVG

Arabidopsis top hitse value%identityAlignment
AT1G14900.1 high mobility group A4.5e-4759.89Show/hide
Query:  SLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRPPKPKSALPEDA-------
        SLP YP+MIM AI++LNDKNG NK+ I K IES+   LPP+  TLL++HL+ MK+TGQL+ VKN+YMKPDP+A PKRGRGRPPK K+    DA       
Subjt:  SLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRPPKPKSALPEDA-------

Query:  --VVS--PPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPK--------PVPSAVPVAGPSRGRGRPPKVKPAVV-PVGC
          VVS  PPR RGRPPKPKDP  P   P++K  +GSGRPRGRPPK P+        P P+A    G  RGRGRPPKVKP VV PVGC
Subjt:  --VVS--PPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPK--------PVPSAVPVAGPSRGRGRPPKVKPAVV-PVGC

AT1G48620.1 high mobility group A54.4e-1031.42Show/hide
Query:  ATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPD-----------PN
        A   Q    P PP    S P Y +MI  AI ALN+ +G++K AI++ IE  Y  +P A   LLTHHL  +K +G L+ VK SY               P+
Subjt:  ATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPD-----------PN

Query:  AQPKRG----RGRPPKPKSALPEDAVVSPPRPRGRPPKPKDPFA-----------------PISQPKK----------KTSSGSGRPRGRPPKYPKPVPS
         +P R         P P   L      +  R RGRPPK K                     P+S+P++          +      RP GRP K     P+
Subjt:  AQPKRG----RGRPPKPKSALPEDAVVSPPRPRGRPPKPKDPFA-----------------PISQPKK----------KTSSGSGRPRGRPPKYPKPVPS

Query:  AVPVAGPSRG------RGRPPKVKPA
          P A  S G      RGRPP  + A
Subjt:  AVPVAGPSRG------RGRPPKVKPA

AT3G18035.1 winged-helix DNA-binding transcription factor family protein1.2e-1035.08Show/hide
Query:  SLPH--YPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQP-------KRGRGRPPKPKSALPE
        S+PH  Y EMI AAI ALN+ +G++K AI++ IE  Y  L  A   LLTHHL  +K +G L  VK SY     +  P                P+S +  
Subjt:  SLPH--YPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQP-------KRGRGRPPKPKSALPE

Query:  DAVVSP----------PRPRGRPPKPKDPF--APISQ-PKKKTSSGSGRPRGRPPKYPKPVPSAVPVA-GPSRGRGRPPK---VKPAVVPV
         +   P           R RGRPPKPK      P+ Q P       +G+P     +   PVP   PV     RG GRP K     PA  P+
Subjt:  DAVVSP----------PRPRGRPPKPKDPF--APISQ-PKKKTSSGSGRPRGRPPKYPKPVPSAVPVA-GPSRGRGRPPK---VKPAVVPV

AT5G08780.1 winged-helix DNA-binding transcription factor family protein4.3e-0541.38Show/hide
Query:  PHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLL
        P Y  MI  AI  LN + GA++ AI++ I+S Y +LP A   LL+HHL  + +  ++L
Subjt:  PHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGACGACCAATACAACAACCCACCTCCGCCGCCTCCATCCGACTCATCTCTTCCGCACTACCCCGAGATGATCATGGCAGCGATTGACGCTCTGAACGACAA
AAACGGAGCGAACAAATCGGCGATCACGAAGCAAATCGAGTCCAGCTACGGCGATTTACCCCCAGCTTTCGACACGCTTCTCACTCACCACTTGGACGTGATGAAGCAAA
CTGGGCAGCTCCTGTTTGTGAAGAACAGCTACATGAAACCCGATCCAAACGCCCAGCCGAAGCGCGGCCGCGGCCGCCCTCCCAAGCCCAAATCGGCCCTCCCGGAAGAC
GCCGTCGTGTCGCCGCCGCGTCCACGAGGCCGCCCGCCGAAACCCAAGGATCCATTCGCTCCCATTTCGCAGCCGAAGAAGAAAACCTCATCGGGAAGTGGAAGGCCACG
TGGCCGCCCTCCGAAGTACCCCAAGCCGGTTCCGTCGGCGGTTCCGGTCGCCGGTCCATCCAGAGGCAGAGGTCGGCCGCCCAAGGTTAAACCGGCCGTCGTTCCGGTTG
GGTGCTGA
mRNA sequenceShow/hide mRNA sequence
CAATTTCCCCTTTTAAAATCAGCCCATTTCCCCTTACTCCATCGTCTTCTTCCACCAAACCTACAGTGCTTCTCTCTCATCTTTCTCTCTCTTAAATCTCACCGTCTCCG
CCGCCGCCGCCGCCATGGCCACCGACGACCAATACAACAACCCACCTCCGCCGCCTCCATCCGACTCATCTCTTCCGCACTACCCCGAGATGATCATGGCAGCGATTGAC
GCTCTGAACGACAAAAACGGAGCGAACAAATCGGCGATCACGAAGCAAATCGAGTCCAGCTACGGCGATTTACCCCCAGCTTTCGACACGCTTCTCACTCACCACTTGGA
CGTGATGAAGCAAACTGGGCAGCTCCTGTTTGTGAAGAACAGCTACATGAAACCCGATCCAAACGCCCAGCCGAAGCGCGGCCGCGGCCGCCCTCCCAAGCCCAAATCGG
CCCTCCCGGAAGACGCCGTCGTGTCGCCGCCGCGTCCACGAGGCCGCCCGCCGAAACCCAAGGATCCATTCGCTCCCATTTCGCAGCCGAAGAAGAAAACCTCATCGGGA
AGTGGAAGGCCACGTGGCCGCCCTCCGAAGTACCCCAAGCCGGTTCCGTCGGCGGTTCCGGTCGCCGGTCCATCCAGAGGCAGAGGTCGGCCGCCCAAGGTTAAACCGGC
CGTCGTTCCGGTTGGGTGCTGAGTGGAATTGAAACAGAGCGTCATAGAGGAAAGACAGAGATATGGAATTTGATTAGGTTGTGTTTATCAGCTCTCCGGGAATTAATTAC
TCTGTTTTTAATTTTGCTAATTTTTCAAAAATATTAATTCAACCCTTTTTTTACTACGTGGCGGGTGATGAATGGCTGTAATTCTGGGTGGGTTAGAAGACTGTAATTGC
ATGTAAGTTGTTTTAGAGGTTTTTTTTTCTCTTTACCTTTTTCCTTTTACTATCTTTAAACTCAAAAAAAAGGCAAAGAAAATAGTTCTATTTTTATGACCACTTACTTT
Protein sequenceShow/hide protein sequence
MATDDQYNNPPPPPPSDSSLPHYPEMIMAAIDALNDKNGANKSAITKQIESSYGDLPPAFDTLLTHHLDVMKQTGQLLFVKNSYMKPDPNAQPKRGRGRPPKPKSALPED
AVVSPPRPRGRPPKPKDPFAPISQPKKKTSSGSGRPRGRPPKYPKPVPSAVPVAGPSRGRGRPPKVKPAVVPVGC