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Sed0021357 (gene) of Chayote v1 genome

Gene IDSed0021357
OrganismSechium edule (Chayote v1)
DescriptionRoot phototropism protein 3-like isoform X1
Genome locationLG04:47561185..47561747
RNA-Seq ExpressionSed0021357
SyntenySed0021357
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050878.1 root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa]3.2e-7379.78Show/hide
Query:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK
        MKDK+EL       SNYWPYRMKLT DQLRWDSLKIS+ K+FEE++ +NMNEGS RDL EMIPIE+SI+DVDICET++VKLVKKEAFWFEPLPLVGE SK
Subjt:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK

Query:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI
        KD F SHS AK+NGKS   +KEKKEFV+SIEPFRHIIKKRGLDYQ EIGLRWSGSK +DRFDFSVLSSPRLSL NLMI
Subjt:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI

KAG6590385.1 hypothetical protein SDJN03_15808, partial [Cucurbita argyrosperma subsp. sororia]1.3e-6171.75Show/hide
Query:  MKDKDELIS------NYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK
        MKDK+ELIS      NYWPYRMKL+ D+LRWDSLKIS+  EFEEM+LRNMNEGS RDL+EMIPIEISI DVDICETYKVKLVKKEAFWFEPLPLVGE S 
Subjt:  MKDKDELIS------NYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK

Query:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLM
        K                   K +  FV+SIEPFRHI+KKRGLDY  EIGLRWSGSKT+DRFDFSVLSS RLS+YNL+
Subjt:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLM

KGN66088.1 hypothetical protein Csa_007428 [Cucumis sativus]4.2e-7379.78Show/hide
Query:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK
        MKDK+EL       SNYWPYRMKLT DQLRWDSLKIS+PKEFEE++ +NMNEGS RDL EMIPIE+SI+DVDICET+KVKLVKKEAFWFEPLPLVGE SK
Subjt:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK

Query:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI
        KD   SH+ AK +GKS   HKEKKEFV+SIEPFRHIIKKRGLDYQ EIG RWSGSK++DRFDFSVLSSPRLSL NLMI
Subjt:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI

TYK10230.1 root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa]1.4e-7380.34Show/hide
Query:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK
        MKDK+EL       SNYWPYRMKLT DQLRWDSLKIS+ KEFEE++ +NMNEGS RDL EMIPIE+SI+DVDICET++VKLVKKEAFWFEPLPLVGE SK
Subjt:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK

Query:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI
        KD F SHS AK+NGKS   +KEKKEFV+SIEPFRHIIKKRGLDYQ EIGLRWSGSK +DRFDFSVLSSPRLSL NLMI
Subjt:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI

XP_022961362.1 uncharacterized protein LOC111461952 [Cucurbita moschata]1.7e-6171.19Show/hide
Query:  MKDKDELIS------NYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK
        MKDK+ELIS      NYWPYRMKL+ D+LRWDSLKIS+  EFEEM+LRNMNEGS RDL+EMIPIEISI DVDICETYKVKLVKKEAFWFEPLPLVGE S 
Subjt:  MKDKDELIS------NYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK

Query:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLM
        K                   K +  FV+SIEPFRHI+KKRGLDY  EIGLRWSGSKT+DRFDFS+LSS RLS+YNL+
Subjt:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLM

TrEMBL top hitse value%identityAlignment
A0A0A0LWG5 Uncharacterized protein2.0e-7379.78Show/hide
Query:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK
        MKDK+EL       SNYWPYRMKLT DQLRWDSLKIS+PKEFEE++ +NMNEGS RDL EMIPIE+SI+DVDICET+KVKLVKKEAFWFEPLPLVGE SK
Subjt:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK

Query:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI
        KD   SH+ AK +GKS   HKEKKEFV+SIEPFRHIIKKRGLDYQ EIG RWSGSK++DRFDFSVLSSPRLSL NLMI
Subjt:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI

A0A5A7U6J2 Root phototropism protein 3-like isoform X11.6e-7379.78Show/hide
Query:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK
        MKDK+EL       SNYWPYRMKLT DQLRWDSLKIS+ K+FEE++ +NMNEGS RDL EMIPIE+SI+DVDICET++VKLVKKEAFWFEPLPLVGE SK
Subjt:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK

Query:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI
        KD F SHS AK+NGKS   +KEKKEFV+SIEPFRHIIKKRGLDYQ EIGLRWSGSK +DRFDFSVLSSPRLSL NLMI
Subjt:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI

A0A5D3CFT9 Root phototropism protein 3-like isoform X17.0e-7480.34Show/hide
Query:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK
        MKDK+EL       SNYWPYRMKLT DQLRWDSLKIS+ KEFEE++ +NMNEGS RDL EMIPIE+SI+DVDICET++VKLVKKEAFWFEPLPLVGE SK
Subjt:  MKDKDELI------SNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK

Query:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI
        KD F SHS AK+NGKS   +KEKKEFV+SIEPFRHIIKKRGLDYQ EIGLRWSGSK +DRFDFSVLSSPRLSL NLMI
Subjt:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI

A0A6J1HA02 uncharacterized protein LOC1114619528.0e-6271.19Show/hide
Query:  MKDKDELIS------NYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK
        MKDK+ELIS      NYWPYRMKL+ D+LRWDSLKIS+  EFEEM+LRNMNEGS RDL+EMIPIEISI DVDICETYKVKLVKKEAFWFEPLPLVGE S 
Subjt:  MKDKDELIS------NYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK

Query:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLM
        K                   K +  FV+SIEPFRHI+KKRGLDY  EIGLRWSGSKT+DRFDFS+LSS RLS+YNL+
Subjt:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLM

A0A6J1HUG6 uncharacterized protein LOC1114679161.0e-6171.75Show/hide
Query:  MKDKDELIS------NYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK
        MKDK+ELIS      NYWPYRMKL+ D+LRWDSLKIS+  EFEEM+LRNMNEGS RDL+EMIPIEISI DVDICETYKVKLVKKEAFWFEPLPLVGE SK
Subjt:  MKDKDELIS------NYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSK

Query:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLM
                            K +  FV+SIEPFRHI+KKRGLDY  EIGLRWSGSKT+DRFDFSVLSS RLSLY L+
Subjt:  KDMFSSHSIAKVNGKSCSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGATAAAGACGAGCTTATTAGTAACTATTGGCCGTATCGGATGAAGTTGACGGCCGATCAGTTACGTTGGGATAGCCTCAAGATCTCGCAACCGAAAGAGTTTGA
AGAAATGATTTTGAGGAACATGAATGAAGGAAGCTTAAGAGATTTGGATGAGATGATACCTATTGAAATATCAATTCATGATGTTGATATTTGTGAAACTTATAAGGTGA
AATTGGTGAAGAAAGAGGCATTTTGGTTTGAACCGTTGCCTTTGGTTGGTGAGATGTCAAAGAAGGATATGTTTTCTTCTCATTCCATTGCAAAAGTGAATGGCAAGTCC
TGCAGTATGCACAAGGAAAAGAAAGAGTTTGTTTTTTCGATCGAGCCTTTTCGCCACATTATAAAGAAACGGGGTCTTGATTATCAACATGAGATCGGTTTGCGTTGGTC
GGGTAGCAAAACGGTTGATCGGTTCGATTTTTCGGTTTTATCTTCTCCAAGGTTGAGCTTATACAACTTGATGATCTGA
mRNA sequenceShow/hide mRNA sequence
GCAAAGGACCAGGGCTGGATGAGGCAACATGTTGGAGGAGCAATATGAAGGATAAAGACGAGCTTATTAGTAACTATTGGCCGTATCGGATGAAGTTGACGGCCGATCAG
TTACGTTGGGATAGCCTCAAGATCTCGCAACCGAAAGAGTTTGAAGAAATGATTTTGAGGAACATGAATGAAGGAAGCTTAAGAGATTTGGATGAGATGATACCTATTGA
AATATCAATTCATGATGTTGATATTTGTGAAACTTATAAGGTGAAATTGGTGAAGAAAGAGGCATTTTGGTTTGAACCGTTGCCTTTGGTTGGTGAGATGTCAAAGAAGG
ATATGTTTTCTTCTCATTCCATTGCAAAAGTGAATGGCAAGTCCTGCAGTATGCACAAGGAAAAGAAAGAGTTTGTTTTTTCGATCGAGCCTTTTCGCCACATTATAAAG
AAACGGGGTCTTGATTATCAACATGAGATCGGTTTGCGTTGGTCGGGTAGCAAAACGGTTGATCGGTTCGATTTTTCGGTTTTATCTTCTCCAAGGTTGAGCTTATACAA
CTTGATGATCTGA
Protein sequenceShow/hide protein sequence
MKDKDELISNYWPYRMKLTADQLRWDSLKISQPKEFEEMILRNMNEGSLRDLDEMIPIEISIHDVDICETYKVKLVKKEAFWFEPLPLVGEMSKKDMFSSHSIAKVNGKS
CSMHKEKKEFVFSIEPFRHIIKKRGLDYQHEIGLRWSGSKTVDRFDFSVLSSPRLSLYNLMI