; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0021359 (gene) of Chayote v1 genome

Gene IDSed0021359
OrganismSechium edule (Chayote v1)
DescriptionRNA-binding protein 24 isoform X1
Genome locationLG10:33155425..33162296
RNA-Seq ExpressionSed0021359
SyntenySed0021359
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592286.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia]3.7e-14691.67Show/hide
Query:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA
        STPK+EKKKWELT GGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMY +  GGI+SGAA
Subjt:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA

Query:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR
        AAAAAFYPYFQFGEGSGGGANGFT GSGQQGYG VQYPHHL QYSAA+NS   TFPQHYAAPPMS+PPTPPTLPSGVTMALP PIPHR
Subjt:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR

XP_022157230.1 RNA-binding protein 24 isoform X1 [Momordica charantia]6.0e-14993.08Show/hide
Query:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPANLA+QFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA
        STPK+EKKKWELTGGGGGRNFRVLSSFQ+GFGGNVGSAFHS  TFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYG+  GGI++GAA
Subjt:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA

Query:  AAAAAFYPYFQFGEGS-GGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR
        AAAAAFYPYFQFGEGS GGG NGFTAGSGQQG   VQYPHHL+QYSAAINS+A +FPQHYAAPPMS+PPTPPTLPSGVTMALPAPIPHR
Subjt:  AAAAAFYPYFQFGEGS-GGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR

XP_022930178.1 RNA-binding protein 38 isoform X1 [Cucurbita moschata]7.9e-14992.36Show/hide
Query:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA
        STPK+EKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMYG+  GGI+SGAA
Subjt:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA

Query:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR
        AAAAAFYPYFQFGEGSGGGANGFT GSGQQGYG VQYPHHL QYSAA+NS   TFPQHYAAPPMS+PPTPPTLPSGVTMALP PIPHR
Subjt:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR

XP_022930180.1 RNA-binding protein 38 isoform X2 [Cucurbita moschata]9.3e-14291.13Show/hide
Query:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA
        STPK+EKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMYG+  GGI+SGAA
Subjt:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA

Query:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALP
        AAAAAFYPYFQFGEGSGGGANGFT GSGQQGYG VQYPHHL QYSAA+NS   TFPQHYAAPPMS+PPTPPTLPS V  A+P
Subjt:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALP

XP_023535742.1 RNA-binding protein 38-like isoform X1 [Cucurbita pepo subsp. pepo]3.7e-14691.67Show/hide
Query:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA
        STPK+EKKKWELT  GGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMYG+  GGI+SGAA
Subjt:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA

Query:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR
        AAAAAFYPYFQFGEGSGGGANGFT GSGQQGYG VQYPHHL QYSAA+NS   TFPQHYAAPPMS+PPTPPTLPSGVTMALP PIPHR
Subjt:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR

TrEMBL top hitse value%identityAlignment
A0A6J1DSJ0 RNA-binding protein 24 isoform X12.9e-14993.08Show/hide
Query:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPANLA+QFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA
        STPK+EKKKWELTGGGGGRNFRVLSSFQ+GFGGNVGSAFHS  TFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYG+  GGI++GAA
Subjt:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA

Query:  AAAAAFYPYFQFGEGS-GGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR
        AAAAAFYPYFQFGEGS GGG NGFTAGSGQQG   VQYPHHL+QYSAAINS+A +FPQHYAAPPMS+PPTPPTLPSGVTMALPAPIPHR
Subjt:  AAAAAFYPYFQFGEGS-GGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR

A0A6J1EUB1 RNA-binding protein 38 isoform X13.8e-14992.36Show/hide
Query:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA
        STPK+EKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMYG+  GGI+SGAA
Subjt:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA

Query:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR
        AAAAAFYPYFQFGEGSGGGANGFT GSGQQGYG VQYPHHL QYSAA+NS   TFPQHYAAPPMS+PPTPPTLPSGVTMALP PIPHR
Subjt:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR

A0A6J1EW94 RNA-binding protein 38 isoform X24.5e-14291.13Show/hide
Query:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA
        STPK+EKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMYG+  GGI+SGAA
Subjt:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA

Query:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALP
        AAAAAFYPYFQFGEGSGGGANGFT GSGQQGYG VQYPHHL QYSAA+NS   TFPQHYAAPPMS+PPTPPTLPS V  A+P
Subjt:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALP

A0A6J1ID09 RNA-binding protein 38 isoform X24.5e-14291.13Show/hide
Query:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA
        STPK+EKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMYG+  GGI+SGAA
Subjt:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA

Query:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALP
        AAAAAFYPYFQFGEGSGGGANGFT GSGQQGYG VQYPHHL QYSAA+NS   TFPQHYAAPPMS+PPTPPTLPS V  A+P
Subjt:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALP

A0A6J1IGG9 RNA-binding protein 38 isoform X13.8e-14992.36Show/hide
Query:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA
        STPK+EKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMYG+  GGI+SGAA
Subjt:  STPKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAA

Query:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR
        AAAAAFYPYFQFGEGSGGGANGFT GSGQQGYG VQYPHHL QYSAA+NS   TFPQHYAAPPMS+PPTPPTLPSGVTMALP PIPHR
Subjt:  AAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR

SwissProt top hitse value%identityAlignment
Q5ZJX4 RNA-binding protein 385.3e-2340Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKWE
        DTT+TK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKWE

Query:  LTGGGGGRNFRVLSSFQTGFGGNVGS---AFHSTP--TFPHYAVQQG-------IPYNLYGYSSYSPDYTYPTSYYNVY-GGATAQYPMYGSSHGGIV--
                      S QTGF   V     AF   P    PHY   Q        IP  +   +S   DYT  +  Y+ Y   A  QYP   S   G V  
Subjt:  LTGGGGGRNFRVLSSFQTGFGGNVGS---AFHSTP--TFPHYAVQQG-------IPYNLYGYSSYSPDYTYPTSYYNVY-GGATAQYPMYGSSHGGIV--

Query:  ------------SGAAAAAAAFYPY
                    S  AA A AF  Y
Subjt:  ------------SGAAAAAAAFYPY

Q62176 RNA-binding protein 384.8e-2457.45Show/hide
Query:  PANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        P+ +     DTT+TK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  PANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q6P8A7 RNA-binding protein 246.9e-2341.29Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKWE

Query:  LTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIP-YNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAAAAAAAF--YP
                  R++   Q GF   V     +    P      GIP + +Y ++   P    P         +T+ Y  Y S+     S AAAAAAA+  YP
Subjt:  LTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIP-YNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAAAAAAAF--YP

Query:  Y
        Y
Subjt:  Y

Q9H0Z9 RNA-binding protein 386.3e-2462.35Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        DTT+TK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q9M1S3 Probable RNA-binding protein ARP14.3e-2537.18Show/hide
Query:  TPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPS
        T  N+   FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGFVTF++ +AA RAC D+ P+I+GRRANCNLASLG +  K  
Subjt:  TPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPS

Query:  T-------PKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGG
        T       PKN  +      G   + +     + +GF          T         Q +P+  YGY S    Y  P   +N   G      M G     
Subjt:  T-------PKNEKKKWELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGG

Query:  IVSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPP
             +     +Y +  +    GGG     A S    +  V YP+H         S A  FPQ   + P+S   TPP
Subjt:  IVSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPP

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-6055.04Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP +     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKW

Query:  ELTGGGGGR--NFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--SSHGGIVSGAAAAA
            GGGGR  N RV +S+ QTGFG          PTF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG  +S GG ++ AAA+A
Subjt:  ELTGGGGGR--NFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--SSHGGIVSGAAAAA

Query:  AAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSM-------PPTPPTLP
          FYP        GGG  G      Q  Y      HHL  Y+          P HY+ P  SM       P  PP +P
Subjt:  AAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSM-------PPTPPTLP

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.0e-6156.65Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP +     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKW

Query:  ELTGGGGGR--NFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--SSHGGIVSGAAAAA
            GGGGR  N RV +S+ QTGFG          PTF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG  +S GG ++ AAA+A
Subjt:  ELTGGGGGR--NFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--SSHGGIVSGAAAAA

Query:  AAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSM
          FYP        GGG  G      Q  Y      HHL  Y+          P HY+ P  SM
Subjt:  AAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSM

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-5953.9Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP +     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKW

Query:  ELTGGGGGR--NFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--SSHGGIVSGAAAAA
            GGGGR  N RV +S+ QTGFG          PTF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG  +S GG ++ AAA+A
Subjt:  ELTGGGGGR--NFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--SSHGGIVSGAAAAA

Query:  AAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPI
          FYP        GGG  G      Q  Y      HHL  Y+          P HY+ P  SM        S  T +   P+
Subjt:  AAFYPYFQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPI

AT1G33470.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.8e-6756.41Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +PEAA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P        
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKWE

Query:  LTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPT-SYYNVYGGATAQYPMYGSSHGGIVSGAAAAAAAFYPY
        + G  GGR  +V S F+T F G   +A  S   F HY     +PY N +G+SSYS DY YPT SYYNVYGGATAQ+PMYGS  G +   AAA AA FYPY
Subjt:  LTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPT-SYYNVYGGATAQYPMYGSSHGGIVSGAAAAAAAFYPY

Query:  FQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALP
         QF EG+G             GY  + YP+H++ YSA        +P H+   P+S+ P+ P +PS V  A+P
Subjt:  FQFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALP

AT1G33470.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-6856.62Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +PEAA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P        
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKWE

Query:  LTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAAAAAAAFYPYF
        + G  GGR  +V S F+T F G   +A  S   F HY     +PY N +G+SSYS DY YPTSYYNVYGGATAQ+PMYGS  G +   AAA AA FYPY 
Subjt:  LTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAAAAAAAFYPYF

Query:  QFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALP
        QF EG+G             GY  + YP+H++ YSA        +P H+   P+S+ P+ P +PS V  A+P
Subjt:  QFGEGSGGGANGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCAGCTAACTTGGCAAGCCAGTTTGGAGACACAACTTACACCAAGGTTTTTGTGGGAGGCTTGGCTTGGGAGACTCACAAAGACACCATGAAGAAATATTTTGA
ACAGTTTGGCGACATCTTGGAAGCCGTCGTCATTACCGACAAGGCCACGGGTCGATCCAAAGGCTACGGATTCGTCACGTTTCGGGAACCCGAGGCCGCGATGAGGGCTT
GCGTCGATGCTGCGCCGGTCATCGATGGTCGGAGGGCTAATTGTAACCTTGCTTCTCTTGGTGTTCAGAGATCTAAACCCTCCACGCCTAAAAACGAGAAAAAGAAATGG
GAATTAACAGGGGGAGGAGGGGGAAGAAATTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCAACACCAACTTTCCCTCA
TTATGCTGTCCAGCAAGGCATCCCTTACAATCTCTATGGGTACTCTTCGTATTCGCCCGACTACACTTACCCTACGAGCTATTACAATGTGTACGGCGGGGCAACGGCGC
AGTACCCTATGTACGGCAGCAGCCACGGCGGAATTGTGAGTGGAGCTGCGGCGGCGGCGGCGGCGTTCTACCCGTATTTCCAATTCGGAGAGGGAAGCGGGGGCGGAGCG
AACGGGTTCACCGCCGGTTCGGGTCAGCAAGGGTACGGGGCGGTTCAGTATCCTCATCATCTTTATCAATACTCAGCGGCGATTAATTCGAACGCGAACACGTTCCCTCA
GCACTACGCTGCCCCACCAATGTCTATGCCTCCCACGCCACCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCAGCACCAATCCCACATCGCTAG
mRNA sequenceShow/hide mRNA sequence
GGGCTCTCTAGGCTGTAGAAAATTTCACGTCCGTATTACAAGAGGGTCTTTCTTGCCTCCCCCTCTCTCCCTATTCTTTATTTCAATTTCCACTTTAACCAAAAAAATAA
AAAATATAATTTGCACTATATTTGCTGTCAAACTTTTGCTTTTCCTTCCTCTCCCTTCTTCTTCCCTTCCCATTTCACTTTCTCTTTTTTGTTGTTTTTCATATCTCTGA
CCTAATTCTCTCCATATCTCTCTTCTTCTCCAACCCTAACCCCCCAAACTCAAATCCTTCATAGATTTAGAGAAAACCCAAGAGATTTTAGAGCACTTGAAAATCAAGAT
CATGACTCCAGCTAACTTGGCAAGCCAGTTTGGAGACACAACTTACACCAAGGTTTTTGTGGGAGGCTTGGCTTGGGAGACTCACAAAGACACCATGAAGAAATATTTTG
AACAGTTTGGCGACATCTTGGAAGCCGTCGTCATTACCGACAAGGCCACGGGTCGATCCAAAGGCTACGGATTCGTCACGTTTCGGGAACCCGAGGCCGCGATGAGGGCT
TGCGTCGATGCTGCGCCGGTCATCGATGGTCGGAGGGCTAATTGTAACCTTGCTTCTCTTGGTGTTCAGAGATCTAAACCCTCCACGCCTAAAAACGAGAAAAAGAAATG
GGAATTAACAGGGGGAGGAGGGGGAAGAAATTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCAACACCAACTTTCCCTC
ATTATGCTGTCCAGCAAGGCATCCCTTACAATCTCTATGGGTACTCTTCGTATTCGCCCGACTACACTTACCCTACGAGCTATTACAATGTGTACGGCGGGGCAACGGCG
CAGTACCCTATGTACGGCAGCAGCCACGGCGGAATTGTGAGTGGAGCTGCGGCGGCGGCGGCGGCGTTCTACCCGTATTTCCAATTCGGAGAGGGAAGCGGGGGCGGAGC
GAACGGGTTCACCGCCGGTTCGGGTCAGCAAGGGTACGGGGCGGTTCAGTATCCTCATCATCTTTATCAATACTCAGCGGCGATTAATTCGAACGCGAACACGTTCCCTC
AGCACTACGCTGCCCCACCAATGTCTATGCCTCCCACGCCACCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCAGCACCAATCCCACATCGCTAGAGAGACTCGACA
TCCGATCCCACATCGCCAAATTTCCCTCTCCAAAGTACCATTCAAAACCACCATTCCTTTCGCCCTAACCATGGTTCCATCTCTATCTCTCAAAATCTAACACCAATTTC
ATCCCATTAGCATATGGTGACCACAAAATTCCCATATGCTTCTGGCTACCAAATCCCAGCCCCACATCGGGTCTGGACCCAACCTCCAAAGTTGGAGCAAAATTCATGCA
TTGTCATTTTTTTCACTTTTGTAATGGGGTCAAAAACCCCAACTTTCAAGGCCATTAAGGGATTTTGGCCTTAAAAGTTGGCAAATTCTCTGCACATAGCCTCCTTTTAG
TCTAAGCTATCAAGGGCTGATCCCCCTTTTTTTTTGTTGAGCCTAAGGAATGGCTCTCCTAAAAAAAACACTTCTCCATAATTGGGTTTGCAACAAAATTGTAAATTTCC
TTCCAAAATAGCATGCCCTTTTTCAAAAACCATCTCAAGTTTTGGACTCAAAAAGCTAATCTTTTTCTCAACTTGATCATCATTAGCATCTTTGTCATTTGTAATTATAT
TTCAATTAGGAGTATTTTTAGAACAAAATTCTGATTTTAAAAGAATTGGTGGGGCAATGGATGCTCCCACCTTTTTCTAAAAATGTTTTCTTTTTCTTTTTTTCAAATTA
ATTTAGTATTAGTTTGACATATTCCTCTTGGGCTAAGGGGAGTAGTACTAAACTAAAACTTTTTTTTTTAATTCATTAACTCTTAAGCAAATTAATTAGTTTCTTGTAAT
TAAAATTCATTAACAATCGTGGTTGAGAACTTATGGGAGTTGCAACCTCGTTTATTTTTGGTAAGCCAAAGCACAAATATTGCTCTTGGTTTAACTTTTTTTTTTTTAAT
TGGTGCATTTAGGGTTTCATAATTAGAGATTTAGGATTAGGGTTTTTAATTAAGCATCCCATCATTTTGAGAGAGTTTCATTAATGGATATGGAGCTTCTCAAAATAAGC
ATTTTGCATGTGAGCCCTTGGGAGATATTTGGGTTCCCTTTGGCTTCTTCTTCACTAACCCTACCAACCATGGTTAGGACTAAGGTCATTTCTTCAATATTCCCATTGTA
CCCCTCTTCATCATCATCCAATCATCATCTTCCCATTTGTTTTCAATTTCTTTTTATGTGTCTGTTGTGTTCAAGGACTTTCTCTTCATGGAGTTGAGTGGACCTTGAAA
ACACTGTTTCTTTTTTTAATTAATTATGTCTGTAAAAGAAGAGCCTTTTCTTTTTATGGTTTGTAATGTAATCAGATGCTCTCTACTAAATTTCTTTTATATTTGGACTT
CTCTACTAAGATTAAGTTCTTCATAACCTACCTCAATATTAGTTG
Protein sequenceShow/hide protein sequence
MTPANLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKNEKKKW
ELTGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGSSHGGIVSGAAAAAAAFYPYFQFGEGSGGGA
NGFTAGSGQQGYGAVQYPHHLYQYSAAINSNANTFPQHYAAPPMSMPPTPPTLPSGVTMALPAPIPHR