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Sed0021360 (gene) of Chayote v1 genome

Gene IDSed0021360
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:29419014..29419419
RNA-Seq ExpressionSed0021360
SyntenySed0021360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042928.1 hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa]5.9e-3073.83Show/hide
Query:  MEANNRKRRGFMKGKLMPFNKQNNGIKTKQVGLVGYVFHRD--YSISPQ-KVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAANYISSTLA
        MEAN RK RGFMKGKLMPF KQ NG KTKQ GLVGYVFHR+   S+S Q  +ALLV +NP  D T AT  SLSQ D+ +G+VADEGVDVKAANYISSTLA
Subjt:  MEANNRKRRGFMKGKLMPFNKQNNGIKTKQVGLVGYVFHRD--YSISPQ-KVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAANYISSTLA

Query:  RFKSLNE
        RFKSLNE
Subjt:  RFKSLNE

KAE8650773.1 hypothetical protein Csa_017653 [Cucumis sativus]1.7e-2162.5Show/hide
Query:  MEANNRKRRGFMKGKLMPFNKQNNGIKTKQVGLVGYVFHRDYSISPQKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAANYISSTLARFK
        MEAN RK RGFM+GKLMPF KQ NG KTKQ GL                     ++PG D T AT DSLSQFD  +G++ADEGVDVKAANYISSTLARFK
Subjt:  MEANNRKRRGFMKGKLMPFNKQNNGIKTKQVGLVGYVFHRDYSISPQKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAANYISSTLARFK

Query:  SLNE
        SLNE
Subjt:  SLNE

KAG6588895.1 hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sororia]3.8e-2979.55Show/hide
Query:  MPFNKQNNGIKTKQVGLVGYVFHRDYSISPQKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAANYISSTLARFKSLNE
        MPF KQ  G KTK  GLVGYVFHRDY+ISP  VALLVHENPG D TA T DSL+QFDN +G+VADEG+DVKAANYISSTLARFKSLNE
Subjt:  MPFNKQNNGIKTKQVGLVGYVFHRDYSISPQKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAANYISSTLARFKSLNE

KAG7022660.1 hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-1872.46Show/hide
Query:  MPFNKQNNGIKTKQVGLVGYVFHRDYSISPQKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVD
        MPF KQ  G KTK  GLVGYVFHRDY+ISP  VALLVHENPG D TA T DSL+QFD+ +G+VADEG+D
Subjt:  MPFNKQNNGIKTKQVGLVGYVFHRDYSISPQKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVD

XP_012070196.1 uncharacterized protein LOC105632422 [Jatropha curcas]7.3e-1245.3Show/hide
Query:  NNRKRRGFMKGKLMPFNKQNNGIKTKQ-------------VGLVGYVFHRDYSISP--QKVALLVHENPGWDATAATCDS-----LSQFDNPHGVVADEG
        +NRKRRGFMKGKL+PF + +    T Q                VG+V H+DY I+P  QKV+ +V           T DS     LSQFD  +GV  DEG
Subjt:  NNRKRRGFMKGKLMPFNKQNNGIKTKQ-------------VGLVGYVFHRDYSISP--QKVALLVHENPGWDATAATCDS-----LSQFDNPHGVVADEG

Query:  VDVKAANYISSTLARFK
        VD+KAA YISS   RFK
Subjt:  VDVKAANYISSTLARFK

TrEMBL top hitse value%identityAlignment
A0A067LN74 Uncharacterized protein3.5e-1245.3Show/hide
Query:  NNRKRRGFMKGKLMPFNKQNNGIKTKQ-------------VGLVGYVFHRDYSISP--QKVALLVHENPGWDATAATCDS-----LSQFDNPHGVVADEG
        +NRKRRGFMKGKL+PF + +    T Q                VG+V H+DY I+P  QKV+ +V           T DS     LSQFD  +GV  DEG
Subjt:  NNRKRRGFMKGKLMPFNKQNNGIKTKQ-------------VGLVGYVFHRDYSISP--QKVALLVHENPGWDATAATCDS-----LSQFDNPHGVVADEG

Query:  VDVKAANYISSTLARFK
        VD+KAA YISS   RFK
Subjt:  VDVKAANYISSTLARFK

A0A0A0LVE7 Uncharacterized protein6.8e-3272.64Show/hide
Query:  MEANNRKRRGFMKGKLMPFNKQNNGIKTKQVGLVGYVFHRD--YSISPQKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAANYISSTLAR
        MEAN RK RGFM+GKLMPF KQ NG KTKQ GLVGYVFHR+   S+S   + LLV ++PG D T AT DSLSQFD  +G++ADEGVDVKAANYISSTLAR
Subjt:  MEANNRKRRGFMKGKLMPFNKQNNGIKTKQVGLVGYVFHRD--YSISPQKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAANYISSTLAR

Query:  FKSLNE
        FKSLNE
Subjt:  FKSLNE

A0A5D3C0J6 Uncharacterized protein2.9e-3073.83Show/hide
Query:  MEANNRKRRGFMKGKLMPFNKQNNGIKTKQVGLVGYVFHRD--YSISPQ-KVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAANYISSTLA
        MEAN RK RGFMKGKLMPF KQ NG KTKQ GLVGYVFHR+   S+S Q  +ALLV +NP  D T AT  SLSQ D+ +G+VADEGVDVKAANYISSTLA
Subjt:  MEANNRKRRGFMKGKLMPFNKQNNGIKTKQVGLVGYVFHRD--YSISPQ-KVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAANYISSTLA

Query:  RFKSLNE
        RFKSLNE
Subjt:  RFKSLNE

A0A6A6LUB7 Uncharacterized protein3.3e-1042.24Show/hide
Query:  NNRKRRGFMKGKLMPFNK------------QNNGIKTKQ----VGLVGYVFHRDYSISP---QKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGV
        +NRKRRGFMKGKLMPF +             +  IK  Q       VG+  H+DY I+P    KV+ ++   P      +  D L+QFD  +GV  DE V
Subjt:  NNRKRRGFMKGKLMPFNK------------QNNGIKTKQ----VGLVGYVFHRDYSISP---QKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGV

Query:  DVKAANYISSTLARFK
        D+KAA+YISS   RFK
Subjt:  DVKAANYISSTLARFK

A0A7J9AQR5 Uncharacterized protein1.1e-0840.91Show/hide
Query:  NRKRRGFMKGKLMPFNKQNNGIKTKQV-------------GLVGYVFHRDYSIS-PQKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAAN
        N KRRGF KGKL PF +   G+ T+Q                + +  H+DY IS P++++ +V   PG        ++LSQ DN  GV  DE VD+KAA 
Subjt:  NRKRRGFMKGKLMPFNKQNNGIKTKQV-------------GLVGYVFHRDYSIS-PQKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAAN

Query:  YISSTLARFK
        YISS   RFK
Subjt:  YISSTLARFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAAACAACAGAAAGAGAAGAGGCTTCATGAAAGGGAAGTTGATGCCTTTTAACAAGCAAAACAATGGAATCAAAACCAAGCAAGTTGGTTTGGTTGGCTATGT
CTTCCACAGGGACTATAGTATTTCTCCACAAAAAGTTGCTTTGTTGGTGCACGAGAACCCCGGCTGGGACGCAACAGCGGCGACTTGTGACTCATTGAGTCAGTTCGATA
ACCCACATGGAGTCGTTGCTGATGAAGGCGTCGATGTAAAGGCTGCAAATTATATTTCCTCCACACTAGCGCGATTCAAAAGCTTGAACGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCAAACAACAGAAAGAGAAGAGGCTTCATGAAAGGGAAGTTGATGCCTTTTAACAAGCAAAACAATGGAATCAAAACCAAGCAAGTTGGTTTGGTTGGCTATGT
CTTCCACAGGGACTATAGTATTTCTCCACAAAAAGTTGCTTTGTTGGTGCACGAGAACCCCGGCTGGGACGCAACAGCGGCGACTTGTGACTCATTGAGTCAGTTCGATA
ACCCACATGGAGTCGTTGCTGATGAAGGCGTCGATGTAAAGGCTGCAAATTATATTTCCTCCACACTAGCGCGATTCAAAAGCTTGAACGAGTGAACACCACCGATCGAA
ATATCGTCGCCTCCGTTAGCTCGCCAAGAGATTTAAATGACTTGTTGAGCATTGTAGTTAAGTTATATTCCTCGTG
Protein sequenceShow/hide protein sequence
MEANNRKRRGFMKGKLMPFNKQNNGIKTKQVGLVGYVFHRDYSISPQKVALLVHENPGWDATAATCDSLSQFDNPHGVVADEGVDVKAANYISSTLARFKSLNE