; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0021366 (gene) of Chayote v1 genome

Gene IDSed0021366
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG08:20200360..20201525
RNA-Seq ExpressionSed0021366
SyntenySed0021366
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588193.1 hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3843.03Show/hide
Query:  SCSFKPLGDHSLEDEEY--VEKGK-RLVKWKMPKVPTQKIFEERRKNLFKAFSSDPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGKYYNNMNIGLVQ
        SCS K    H+L+ +EY  VEKGK  L+ W +P +PT KI+   + NLF  FS +  +KT E        GG   L  +    +  + K Y  ++IG+VQ
Subjt:  SCSFKPLGDHSLEDEEY--VEKGK-RLVKWKMPKVPTQKIFEERRKNLFKAFSSDPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGKYYNNMNIGLVQ

Query:  IGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRTCYKLNP
        IG+KALT+  P  AK+++CLRD R   ++DSLLG+VE+NLKDGP YFNVFPNI  SLS      L  +L ++  V  F+QLP+  + IV+  R CYK+  
Subjt:  IGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRTCYKLNP

Query:  NSFGPEALLESPV-GKTVFFQTKILEDNKEDHGAVQKVTIWDKVELPCDWP
               LL++P  G+T+FFQT   E    D    Q VT+W++V+LP +WP
Subjt:  NSFGPEALLESPV-GKTVFFQTKILEDNKEDHGAVQKVTIWDKVELPCDWP

KAG6590198.1 hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia]7.5e-8860.87Show/hide
Query:  MSHLLKSCSFKPLGDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSS--DPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGKYYNNMN
        MS   +SCS K + DHSLEDEEYVEKG  LVKW MP VP  K++E + K     FS+  D SI+ TE ++SFG  GG+FKLY Q PS YG KGK+Y+ MN
Subjt:  MSHLLKSCSFKPLGDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSS--DPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGKYYNNMN

Query:  IGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRTC
        IGLVQIG+K +T+KIPS A II+C+RDNR++K+EDS++ +VES L DGPFYFNVFPN+NFSL  +S   + +VLSVHVLV GFDQL K SEPIV++CRTC
Subjt:  IGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRTC

Query:  YKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHG----AVQKVTIWDKVELPCDWPPQLQVKNVPYRVTSING
        YKLN   FGPEALLESPVGKTVFFQT+I+       G     VQKVT WD+V+LP +WPPQL +   P     +NG
Subjt:  YKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHG----AVQKVTIWDKVELPCDWPPQLQVKNVPYRVTSING

KGN66493.1 hypothetical protein Csa_007053 [Cucumis sativus]1.3e-9266.67Show/hide
Query:  MSHLLKSCSFKP-LGDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSS--DPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGK--YYN
        MS   KSCS K  +GDHSLE+EEYVEKGK LVKWKMP+VP  KI+EERRKN F  F S  DPSI+TTE ++SFG +GG+FKLY Q PS Y  + +  ++N
Subjt:  MSHLLKSCSFKP-LGDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSS--DPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGK--YYN

Query:  NMNIGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTC
         MNIGLVQIG+K LTKKIP  A II+CLRDNR++K+EDSLL LVES L DGPFYFNVFPNIN SL  S   S+T+VLSVHVLV G D++PK S PIV+TC
Subjt:  NMNIGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTC

Query:  RTCYKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKVELPCDWPPQLQVKNVP
        RTCYKLN N FG EAL+ESPVGKTVFFQ +I ED+ +D   VQKVT+W++V+LP DWPP+L +  VP
Subjt:  RTCYKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKVELPCDWPPQLQVKNVP

KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]3.2e-4648.29Show/hide
Query:  GDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSSDPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGK-YYNNMNIGLVQIGLKALTKK
        G HSL+ EEY++KGK L+KWK+PK+PT KI+   + N F  F SDP IKT E  +        F+L S  P     + K +Y  +N+G++QIG+K LT K
Subjt:  GDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSSDPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGK-YYNNMNIGLVQIGLKALTKK

Query:  IPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRTCYKLNPNSFGPEALL
        IPS A II+C+ D R D  EDS+LGLVES L DGP +FN+FPNI   +       L     +  +V GF+QLP+ + PI L  RTCYKL  ++  P AL+
Subjt:  IPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRTCYKLNPNSFGPEALL

Query:  ESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKV
        ESP GKTVFFQT   E++K    A QKV+ WD+V
Subjt:  ESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKV

XP_038880673.1 uncharacterized protein LOC120072292 [Benincasa hispida]1.3e-3942.17Show/hide
Query:  MSHLLKSCSFKPL--GDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSSDPSIKTTEAKLSFGKDGGAFKLYSQVPSPYG-SKGKYYNNM
        M+ L K C       G H+L+ EEY++KG  L+KWK+PKVPT KI+   ++N F  F SDPSIKT E K+S      AF+L ++ P     +  ++Y  +
Subjt:  MSHLLKSCSFKPL--GDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSSDPSIKTTEAKLSFGKDGGAFKLYSQVPSPYG-SKGKYYNNM

Query:  NIGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRT
        N+G++QIG+K +T KIPS A II+C+ D+R +  ED++LGLVESNL                                    GF+QLP+ + PI L  RT
Subjt:  NIGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRT

Query:  CYKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKV
        CYKL  ++  P ALLESP GKTV+FQT    D +    AVQKV+ WD+V
Subjt:  CYKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKV

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein6.4e-9366.67Show/hide
Query:  MSHLLKSCSFKP-LGDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSS--DPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGK--YYN
        MS   KSCS K  +GDHSLE+EEYVEKGK LVKWKMP+VP  KI+EERRKN F  F S  DPSI+TTE ++SFG +GG+FKLY Q PS Y  + +  ++N
Subjt:  MSHLLKSCSFKP-LGDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSS--DPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGK--YYN

Query:  NMNIGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTC
         MNIGLVQIG+K LTKKIP  A II+CLRDNR++K+EDSLL LVES L DGPFYFNVFPNIN SL  S   S+T+VLSVHVLV G D++PK S PIV+TC
Subjt:  NMNIGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTC

Query:  RTCYKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKVELPCDWPPQLQVKNVP
        RTCYKLN N FG EAL+ESPVGKTVFFQ +I ED+ +D   VQKVT+W++V+LP DWPP+L +  VP
Subjt:  RTCYKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKVELPCDWPPQLQVKNVP

A0A0A0LZS0 Uncharacterized protein1.5e-4648.29Show/hide
Query:  GDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSSDPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGK-YYNNMNIGLVQIGLKALTKK
        G HSL+ EEY++KGK L+KWK+PK+PT KI+   + N F  F SDP IKT E  +        F+L S  P     + K +Y  +N+G++QIG+K LT K
Subjt:  GDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSSDPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGK-YYNNMNIGLVQIGLKALTKK

Query:  IPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRTCYKLNPNSFGPEALL
        IPS A II+C+ D R D  EDS+LGLVES L DGP +FN+FPNI   +       L     +  +V GF+QLP+ + PI L  RTCYKL  ++  P AL+
Subjt:  IPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRTCYKLNPNSFGPEALL

Query:  ESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKV
        ESP GKTVFFQT   E++K    A QKV+ WD+V
Subjt:  ESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKV

A0A0D2RMY0 Uncharacterized protein (Fragment)2.3e-2129.73Show/hide
Query:  EDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSSDPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGKYYNNMNIGLVQIGLKALTKKIPSKAK
        ++E Y    +R   W +P+VPT +++++       AF S   IKT E  L   K+    +L  +V      K + Y  ++ GLVQ+G+K L+ +      
Subjt:  EDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSSDPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGKYYNNMNIGLVQIGLKALTKKIPSKAK

Query:  IIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRTCYKLNPNSFGPEALLESPVGK
        I+V LRD R     DSLLG +E++L  GP +FN +PN   SL   +  ++   L++ +  + +  LP  +E + L  R  +K   +    +ALL+SP G+
Subjt:  IIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRTCYKLNPNSFGPEALLESPVGK

Query:  TVFFQTKILEDNKEDHGAVQKVTIWDKVELPCDWPPQLQVKNVPYRVTSINGTSFVRMS
        T+  +T    D    H  + +   W ++ LP  W  +L+    P   T I  TS   +S
Subjt:  TVFFQTKILEDNKEDHGAVQKVTIWDKVELPCDWPPQLQVKNVPYRVTSINGTSFVRMS

A0A5A7U9X3 Polyprotein1.1e-3150.97Show/hide
Query:  KYYNNMNIGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPI
        ++   +N+G++QIG+K LT KI S A II+C+ D R D  EDS+LGLVE+ L DGP +FN+FPNI  SL       L   L +  +V GF+QLP+ + PI
Subjt:  KYYNNMNIGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPI

Query:  VLTCRTCYKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKV
         L  RTCYKL  ++F P AL+ESP GKTVFFQT    D +    AVQKV+ WD+V
Subjt:  VLTCRTCYKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKV

A0A5D3D5V1 Polyprotein1.3e-3251.61Show/hide
Query:  KYYNNMNIGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPI
        ++   +N+G++QIG+K LT KIPS A II+C+ D R D  EDS+LGLVE+ L DGP +FN+FPNI  SL       L   L +  +V GF+QLP+ + PI
Subjt:  KYYNNMNIGLVQIGLKALTKKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPI

Query:  VLTCRTCYKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKV
         L  RTCYKL  ++F P AL+ESP GKTVFFQT    D +    AVQKV+ WD+V
Subjt:  VLTCRTCYKLNPNSFGPEALLESPVGKTVFFQTKILEDNKEDHGAVQKVTIWDKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACACCTTTTAAAGTCTTGTAGCTTCAAACCCCTTGGTGATCATTCCTTAGAAGATGAAGAATATGTTGAAAAGGGGAAAAGATTGGTGAAATGGAAGATGCCAAA
AGTCCCAACTCAAAAAATCTTTGAAGAAAGAAGAAAAAATCTCTTCAAAGCCTTTTCATCCGATCCTTCCATCAAAACCACAGAAGCCAAATTGAGCTTTGGAAAAGATG
GAGGAGCTTTCAAATTGTATAGTCAAGTTCCTTCACCCTATGGCAGCAAAGGAAAATACTACAACAACATGAACATAGGGCTTGTTCAAATTGGACTCAAAGCCCTAACA
AAAAAAATTCCCTCAAAAGCCAAAATAATTGTGTGCCTTCGTGACAATAGAGTTGACAAAATTGAAGACTCTCTTTTGGGATTGGTGGAATCCAATTTGAAAGACGGCCC
ATTTTACTTCAATGTTTTTCCAAACATAAATTTTTCTTTGTCTTGTTCATCCTCCTATTCACTCACTCATGTTTTGAGTGTTCATGTTTTGGTCAATGGGTTTGACCAGC
TCCCAAAAGATTCTGAGCCAATTGTGTTGACATGTCGAACATGTTACAAGTTGAATCCAAACAGCTTTGGACCAGAGGCCTTGCTTGAAAGTCCTGTTGGGAAAACTGTG
TTTTTTCAGACAAAGATTCTCGAGGATAATAAGGAGGATCATGGTGCTGTTCAAAAGGTGACAATTTGGGACAAAGTTGAGTTGCCTTGTGATTGGCCTCCTCAGCTTCA
GGTTAAAAATGTTCCTTATAGAGTGACTAGTATCAATGGAACTAGTTTTGTTAGAATGAGTACCAATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATCATTTACAAAGATCATCAAACCAAGATCAAAAGGTATCATTTTTTTTTATTAGTTCTTTCAATAAACAATCTCAAGAAAACAAGAATGTCACACCTTTTAAAGTCTTG
TAGCTTCAAACCCCTTGGTGATCATTCCTTAGAAGATGAAGAATATGTTGAAAAGGGGAAAAGATTGGTGAAATGGAAGATGCCAAAAGTCCCAACTCAAAAAATCTTTG
AAGAAAGAAGAAAAAATCTCTTCAAAGCCTTTTCATCCGATCCTTCCATCAAAACCACAGAAGCCAAATTGAGCTTTGGAAAAGATGGAGGAGCTTTCAAATTGTATAGT
CAAGTTCCTTCACCCTATGGCAGCAAAGGAAAATACTACAACAACATGAACATAGGGCTTGTTCAAATTGGACTCAAAGCCCTAACAAAAAAAATTCCCTCAAAAGCCAA
AATAATTGTGTGCCTTCGTGACAATAGAGTTGACAAAATTGAAGACTCTCTTTTGGGATTGGTGGAATCCAATTTGAAAGACGGCCCATTTTACTTCAATGTTTTTCCAA
ACATAAATTTTTCTTTGTCTTGTTCATCCTCCTATTCACTCACTCATGTTTTGAGTGTTCATGTTTTGGTCAATGGGTTTGACCAGCTCCCAAAAGATTCTGAGCCAATT
GTGTTGACATGTCGAACATGTTACAAGTTGAATCCAAACAGCTTTGGACCAGAGGCCTTGCTTGAAAGTCCTGTTGGGAAAACTGTGTTTTTTCAGACAAAGATTCTCGA
GGATAATAAGGAGGATCATGGTGCTGTTCAAAAGGTGACAATTTGGGACAAAGTTGAGTTGCCTTGTGATTGGCCTCCTCAGCTTCAGGTTAAAAATGTTCCTTATAGAG
TGACTAGTATCAATGGAACTAGTTTTGTTAGAATGAGTACCAATCATTGAGTCTCTTGGTTACTTTACTTTGTAATGGGCAAAATGGTCTTTTCTTCTTTTTGATCATGC
AAGGAAAATAATTATTTTGGGTAGTTTTATGTTGTGTTTGTGTTTATTTTAGGATGGATGTTTGCCTTTTTGCATAAGCCATTTGGGAAAAATATGTGTATAATGTATTT
GGTTTGATGTACTTTTATGTGTTCTTTTACATAAATGATTAATAAAACGTACAAGTGGTTTCTTAA
Protein sequenceShow/hide protein sequence
MSHLLKSCSFKPLGDHSLEDEEYVEKGKRLVKWKMPKVPTQKIFEERRKNLFKAFSSDPSIKTTEAKLSFGKDGGAFKLYSQVPSPYGSKGKYYNNMNIGLVQIGLKALT
KKIPSKAKIIVCLRDNRVDKIEDSLLGLVESNLKDGPFYFNVFPNINFSLSCSSSYSLTHVLSVHVLVNGFDQLPKDSEPIVLTCRTCYKLNPNSFGPEALLESPVGKTV
FFQTKILEDNKEDHGAVQKVTIWDKVELPCDWPPQLQVKNVPYRVTSINGTSFVRMSTNH