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Sed0021387 (gene) of Chayote v1 genome

Gene IDSed0021387
OrganismSechium edule (Chayote v1)
DescriptionDNA (Cytosine-5)-methyltransferase CMT3-like
Genome locationLG08:12138398..12139729
RNA-Seq ExpressionSed0021387
SyntenySed0021387
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653489.1 hypothetical protein Csa_006929, partial [Cucumis sativus]2.0e-2170.33Show/hide
Query:  SRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVG
        S S SFS+QWL ATI LIIFGFLAYA+YDAA+ASA EVFQRLVVVSPLLLVVAVHWLSLG  GG            +N+N  AVGF WGVG
Subjt:  SRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVG

KAG6588160.1 hypothetical protein SDJN03_16725, partial [Cucurbita argyrosperma subsp. sororia]7.6e-3776.86Show/hide
Query:  MATYSRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLIL
        MA Y+RS +FS+QWL ATI LII GFLAYAIYDAAIASA EV QRLV+VSPLLLVV VHWLSLGGGGG G  +SY     ++HNQ AVGF WGVGFLL+L
Subjt:  MATYSRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLIL

Query:  LLFPWSAAILLLLLYFFFLIN
        LLFPWSAAILLL+LYFFFL N
Subjt:  LLFPWSAAILLLLLYFFFLIN

XP_011660097.1 uncharacterized protein LOC105436341 [Cucumis sativus]4.3e-3274.36Show/hide
Query:  SRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLILLLFP
        S S SFS+QWL ATI LIIFGFLAYA+YDAA+ASA EVFQRLVVVSPLLLVVAVHWLSLG  GG            +N+N  AVGF WGVGFLL+LLLFP
Subjt:  SRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLILLLFP

Query:  WSAAILLLLLYFFFLIN
        WS AILLLLLYFFFL N
Subjt:  WSAAILLLLLYFFFLIN

XP_022157357.1 uncharacterized protein LOC111024080 [Momordica charantia]1.3e-2868.03Show/hide
Query:  MATYSRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGG-GGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLI
        MA  +RSG  SEQWL AT+ LI FGFLAYAIYDAA+AS  E+FQR+VVVSPLLLVVAVHWLS+GGG  G G              Q AVGF WGVG LL+
Subjt:  MATYSRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGG-GGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLI

Query:  LLLFPWSAAILLLLLYFFFLIN
        L+LFPWSAA+LLLLLYFFFL N
Subjt:  LLLFPWSAAILLLLLYFFFLIN

XP_024928328.1 LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase CMT3-like [Ziziphus jujuba]7.9e-1048.6Show/hide
Query:  MATYSRSGSF----SEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGF
        MA+ SRSG+F    SE WL     ++I GFL Y IYDA +A+A E+ QRL+V+SPLLLV+AVHWLS G         S        H  G  G  WGV F
Subjt:  MATYSRSGSF----SEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGF

Query:  LLILLLF
        +L+LL F
Subjt:  LLILLLF

TrEMBL top hitse value%identityAlignment
A0A0A0M2K2 Uncharacterized protein2.1e-3274.36Show/hide
Query:  SRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLILLLFP
        S S SFS+QWL ATI LIIFGFLAYA+YDAA+ASA EVFQRLVVVSPLLLVVAVHWLSLG  GG            +N+N  AVGF WGVGFLL+LLLFP
Subjt:  SRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLILLLFP

Query:  WSAAILLLLLYFFFLIN
        WS AILLLLLYFFFL N
Subjt:  WSAAILLLLLYFFFLIN

A0A5A7TFN5 DNA (Cytosine-5)-methyltransferase CMT3-like2.1e-3274.36Show/hide
Query:  SRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLILLLFP
        S S SFS+QWL ATI LIIFGFLAYA+YDAA+ASA EVFQRLVVVSPLLLVVAVHWLSLG  GG            +N+N  AVGF WGVGFLL+LLLFP
Subjt:  SRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLILLLFP

Query:  WSAAILLLLLYFFFLIN
        WS AILLLLLYFFFL N
Subjt:  WSAAILLLLLYFFFLIN

A0A6J1DUA1 uncharacterized protein LOC1110240806.3e-2968.03Show/hide
Query:  MATYSRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGG-GGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLI
        MA  +RSG  SEQWL AT+ LI FGFLAYAIYDAA+AS  E+FQR+VVVSPLLLVVAVHWLS+GGG  G G              Q AVGF WGVG LL+
Subjt:  MATYSRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGG-GGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLI

Query:  LLLFPWSAAILLLLLYFFFLIN
        L+LFPWSAA+LLLLLYFFFL N
Subjt:  LLLFPWSAAILLLLLYFFFLIN

A0A6P6G2P1 LOW QUALITY PROTEIN: DNA (Cytosine-5)-methyltransferase CMT3-like3.8e-1048.6Show/hide
Query:  MATYSRSGSF----SEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGF
        MA+ SRSG+F    SE WL     ++I GFL Y IYDA +A+A E+ QRL+V+SPLLLV+AVHWLS G         S        H  G  G  WGV F
Subjt:  MATYSRSGSF----SEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGF

Query:  LLILLLF
        +L+LL F
Subjt:  LLILLLF

A0A7N2QX68 Uncharacterized protein2.2e-1048.48Show/hide
Query:  SFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAV----GFSWGVGFLLILLLF
        S SE WL    F+ I GFL Y IYDA +A+A E+ QRL+V+SPLLLV+AVHWLS G         S+ +        GA+    G  WGV F+L+LLLF
Subjt:  SFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAV----GFSWGVGFLLILLLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACATATAGCAGATCAGGAAGCTTCTCAGAGCAATGGCTTTTTGCAACCATTTTTCTTATAATATTTGGATTTTTGGCTTATGCCATCTACGATGCCGCCATAGC
CTCGGCCTTGGAGGTGTTCCAGAGGCTCGTTGTCGTCTCGCCGCTGCTTTTGGTCGTGGCTGTCCACTGGCTGTCCCTTGGGGGCGGCGGAGGCAGAGGATATAACAGTA
GCTATAGCCATAATCATAACCATAACCATAACCAGGGGGCTGTGGGATTTTCATGGGGTGTTGGATTTCTTTTGATTCTGCTTTTGTTTCCTTGGAGTGCTGCCATTCTG
CTGCTTTTGCTTTATTTCTTCTTTCTCATTAACTGA
mRNA sequenceShow/hide mRNA sequence
CCAAAAGTGTAGCAAGCACATTTTTGTATTTCTTCACACTTCACCTCTTTAAGTACACACAACACAAATATTTTCCCAGTCCTAAAAGAAACATCAAAACAAGACCCTTT
TCTTTTCTCCCCTTCTTATGGCTACATATAGCAGATCAGGAAGCTTCTCAGAGCAATGGCTTTTTGCAACCATTTTTCTTATAATATTTGGATTTTTGGCTTATGCCATC
TACGATGCCGCCATAGCCTCGGCCTTGGAGGTGTTCCAGAGGCTCGTTGTCGTCTCGCCGCTGCTTTTGGTCGTGGCTGTCCACTGGCTGTCCCTTGGGGGCGGCGGAGG
CAGAGGATATAACAGTAGCTATAGCCATAATCATAACCATAACCATAACCAGGGGGCTGTGGGATTTTCATGGGGTGTTGGATTTCTTTTGATTCTGCTTTTGTTTCCTT
GGAGTGCTGCCATTCTGCTGCTTTTGCTTTATTTCTTCTTTCTCATTAACTGAATCTCATTCCCCTGCTTCAGTTTCTCTTATTTCCATTTGTATGTTTACTAAATCTCT
GTTACATATATGTTTTTGTCTCTAATCTTTGCAATTTTTTAAAAGTTAATTGTGTTTATAAAGTTTTTTTTTTTTTTCTTCAGTATTTGGGACTTGAACTCGTAACTAAC
TAGTTATAACTATGTGTAATGCCACTGGAATACTATTTCTCTATAATGTTAAAATTACCTAAAGTGGAGACAAAAAAAGTCATTTGAGCCAACAAAATTTGAAAATTCTA
AAACTAAAAAAATCTTATATTATACAACTTTTTTTTACTCTTTTAATTAATGTCAATTTGCTAAAAGAAACAATTAAATTTGTCAGTGTAAAATCAAACATTAAATTGAT
TTTGAAGGAGTGATTTTGTATATTAAAATGATCTTAACCCTTTCAGAATCACTTTTGGATATGTCTATACTTATATTATTAGCGAATTGTAACATAAGGGACTAAATTGA
AAGAAGTTTTAAAGATTAGGGACTAAAACATAATAAACTCACATATCTAAATTCCTCTTCTTTATAGACTTACAAATTGCCAATGTTTCCGAGTCATTGTTCTTCTTTGT
CTCCTGCAATTTTAACTGTAAATGTAACTCTTTCTCTTTTTTTCTTCTCTTTCTTGTTTAATATGGAGGTTGCCATTGTCAGAACATTTCTTCTTCCACTTCCATTTCTC
TGTCTTGTTTAATTTGCAAAGGGCCCATTATTAGGGCCATTTCTGACAATTCACACTCTCTTGTCCTTGTTGAAAATTAATTTATTTGTGATGGTCAGTTCTTGTGGTAG
CAATATTGCCAG
Protein sequenceShow/hide protein sequence
MATYSRSGSFSEQWLFATIFLIIFGFLAYAIYDAAIASALEVFQRLVVVSPLLLVVAVHWLSLGGGGGRGYNSSYSHNHNHNHNQGAVGFSWGVGFLLILLLFPWSAAIL
LLLLYFFFLIN