CuGenDBv2

Gene ID	Sed0021432
Organism	Sechium edule (Chayote v1)
Description	ATP synthase subunit d, mitochondrial
Genome location	LG07:38927599..38930925
RNA-Seq Expression	Sed0021432
Synteny	Sed0021432
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0000274 - mitochondrial proton-transporting ATP synthase, stator stalk (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR008689 - ATP synthase, F0 complex, subunit D, mitochondrial IPR036228 - ATP synthase, F0 complex, subunit D superfamily, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142418.1 ATP synthase subunit d, mitochondrial [Cucumis sativus]

7.5e-83

94.64

Show/hide

Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG++KKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAY+ IEIPKFVDTVTPQYK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAE KSLKESERLEKEIAEVQE+KKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_008446913.1 PREDICTED: ATP synthase subunit d, mitochondrial [Cucumis melo]

2.8e-82

94.64

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Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG+VKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAY+SIEIPKFVDTVTPQYK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAE KSLKESERLEKEIAEV+E+K+KICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022945159.1 ATP synthase subunit d, mitochondrial [Cucurbita moschata]

1.7e-82

95.24

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Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG+VKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAY+SIE+PKFVDTVTPQYK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAEVKSLKESERLEKEI EVQELKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022966719.1 ATP synthase subunit d, mitochondrial [Cucurbita maxima]

1.7e-82

95.24

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Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG+VKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAY+SIE+PKFVDTVTPQYK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAEVKSLKESERLEKEI EVQELKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_023541261.1 ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]

2.8e-82

94.64

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Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG+VKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAY+SIE+PKFVDTVTPQYK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAEVKSLKESERLEKEI EVQE+KKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRL4 ATP synthase subunit d, mitochondrial

3.6e-83

94.64

Show/hide

Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG++KKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAY+ IEIPKFVDTVTPQYK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAE KSLKESERLEKEIAEVQE+KKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A5D3CDC0 ATP synthase subunit d, mitochondrial

1.4e-82

94.64

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Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG+VKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAY+SIEIPKFVDTVTPQYK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAE KSLKESERLEKEIAEV+E+K+KICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1G072 ATP synthase subunit d, mitochondrial

8.1e-83

95.24

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Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG+VKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAY+SIE+PKFVDTVTPQYK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAEVKSLKESERLEKEI EVQELKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1HUL8 ATP synthase subunit d, mitochondrial

8.1e-83

95.24

Show/hide

Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG+VKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAY+SIE+PKFVDTVTPQYK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAEVKSLKESERLEKEI EVQELKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

E5GCK9 ATP synthase subunit d, mitochondrial

1.4e-82

94.64

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Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG+VKKV DVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAY+SIEIPKFVDTVTPQYK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAE KSLKESERLEKEIAEV+E+K+KICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

SwissProt top hits

e value

%identity

Alignment

Q9FT52 ATP synthase subunit d, mitochondrial

7.8e-75

82.14

Show/hide

Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG+ KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAY+SIEIPK+VD VTP+YK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAE KSLKESERLEKEIA+VQE+ KK+ TMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

Arabidopsis top hits

e value

%identity

Alignment

AT3G52300.1 ATP synthase D chain, mitochondrial

5.5e-76

82.14

Show/hide

Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG+ KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAY+SIEIPK+VD VTP+YK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD LLVELKEAE KSLKESERLEKEIA+VQE+ KK+ TMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDELLVELKEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

AT3G52300.2 ATP synthase D chain, mitochondrial

6.0e-46

77.78

Show/hide

Query:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK
        MSG+ KK+ADVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAY+SIEIPK+VD VTP+YK
Subjt:  MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYK

Query:  PKFDELLV
        PKFD L++
Subjt:  PKFDELLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGCGGTTCCGTCAAGAAAGTGGCTGATGTTGCCTTCAAAGCTTCGAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCCCGCAAGGAGTT
TTCATCCCTTCGCCGCGCCTTCGAGGAGGTTAACTCGACCCTCCAGACCAAGTTTAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATCGGTTCTC
GCTTGGTTGACATGTACAAAGAGGCTTACAACAGCATTGAGATCCCCAAATTTGTAGACACAGTGACTCCACAGTACAAACCTAAATTTGATGAGTTGCTGGTAGAATTG
AAGGAAGCTGAAGTAAAATCCCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGCTGAAGTTCAAGAATTGAAGAAAAAGATTTGCACCATGACTGCTGACGAATACTT
CGAGAAGCATCCCGAGCTGAGGAAGAAATTCGACGATGAAATCCGAAACGACTACTGGGGCTATTGA

mRNA sequence

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AGCAGCCCAAGAATCCGAACCGGTTATCAGAAGCCGAAATCTGAATTTGAGCTCTCAAGAACAAGAATTTGCCCTCTTTTTCACGGTTGATCCCATTGAATTTGTTTCCT
CTGCAAAATCCGGCCAAAAAAATGAGCGGTTCCGTCAAGAAAGTGGCTGATGTTGCCTTCAAAGCTTCGAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTC
CGATGAGGCCCGCAAGGAGTTTTCATCCCTTCGCCGCGCCTTCGAGGAGGTTAACTCGACCCTCCAGACCAAGTTTAGCCAGGAACCAGAGCCCATAGACTGGGAATATT
ACAGAAAGGGAATCGGTTCTCGCTTGGTTGACATGTACAAAGAGGCTTACAACAGCATTGAGATCCCCAAATTTGTAGACACAGTGACTCCACAGTACAAACCTAAATTT
GATGAGTTGCTGGTAGAATTGAAGGAAGCTGAAGTAAAATCCCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGCTGAAGTTCAAGAATTGAAGAAAAAGATTTGCAC
CATGACTGCTGACGAATACTTCGAGAAGCATCCCGAGCTGAGGAAGAAATTCGACGATGAAATCCGAAACGACTACTGGGGCTATTGACTGCAAATTTGACTGGTTGAAG
GGCTTCGAAGTTTGGCAACAATTTAATTTCACAAACATTTTCCGGGACTTGTTTTGCTGCAGATGTTGGTCAGTAATAAAACAAACCAGATAGTTCCTCTGCAATTTGGT
TGCATTGCTTTCTAAATTATGGTGACGAAATTGATTAGAAAAATTGAGTTTTATTGTTTTTTTGAAACGATGTTGTTAGAGTTCAAAATAAATTGAGGTACATTATCATG
GAAGGTACATTGTTATTTCAGTCTTTTTTTTGGGTACCCACGTCCGTCCCTAGGTTAAGCATCGGGAGTCATCGAAGGTGTAATGATACAAGTGAGTCTCAAACTTGGGA
CCTTGAAGATAGCATATCTTCAAAGCCCAAATTTTCTACCTCACCTTGAGAACTATTTTAGTAAAATTAATAATGTTTAAT

Protein sequence

Show/hide protein sequence

MSGSVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYNSIEIPKFVDTVTPQYKPKFDELLVEL
KEAEVKSLKESERLEKEIAEVQELKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

Sed0021432 (gene) of Chayote v1 genome