CuGenDBv2

Gene ID	Sed0021477
Organism	Sechium edule (Chayote v1)
Description	LITAF domain-containing protein
Genome location	LG07:1174915..1178359
RNA-Seq Expression	Sed0021477
Synteny	Sed0021477
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR006629 - LPS-induced tumour necrosis factor alpha factor IPR037519 - LITAF domain containing protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140553.1 GSH-induced LITAF domain protein [Cucumis sativus]

1.5e-65

86.47

Show/hide

Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        MSK  EPVVGVP YVGNN YQAGQIPPNAIFGDP GVPI QTMYRDTPAPF C YCG  GLT +RSK+SSAAVVGCMMPFMLGVCFL PSMDCLWHKYHY
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALP
        CPSCKEKVG+FEKLDRCAVMDPPHW Q S+ALP
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALP

XP_022148974.1 GSH-induced LITAF domain protein [Momordica charantia]

2.3e-66

85.07

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Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        MSK DEPVVG+P Y G+NAYQAGQIP NAI+GDPQGVPI QTM+RDTPAPFYC YCG  GLT+VRSK+SSAAVVGCM+PFMLGVCFLFPSM+CLWHKYHY
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA
        CP+CKEKVG+FEKLDRCAVMDPPHW Q SFALPA
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA

XP_022954275.1 GSH-induced LITAF domain protein [Cucurbita moschata]

1.7e-66

86.57

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Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        MSK DEPVVG+PFYVGNNAYQAGQIPPNAIFG PQGVPIHQTMYRDTPAP+ C YCG  GLT++RSK+S AAVVGCMMPFMLGVCFL PSMDCLWHKYHY
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA
        CPSCKEKVG+FEK D CAVMDPPHW Q SFALPA
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA

XP_022991744.1 GSH-induced LITAF domain protein [Cucurbita maxima]

2.3e-66

85.82

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Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        MSK DEPVVG+PFYVGNN+YQAGQIPPNAIFG PQGVPIHQTMYRDTPAP+ C YCG  GLT++RSK+S AAVVGCMMPFMLGVCFL PSMDCLWHKYHY
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA
        CPSCKEKVG+FEK D CAVMDPPHW Q SFALPA
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA

XP_038906445.1 GSH-induced LITAF domain protein [Benincasa hispida]

1.1e-65

85.82

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Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        MSK DEPVVG+P Y GNN YQAGQIP NAIFGDPQGVPI QTMYRDTPAPFYC YCG  GLT VRSK+SSAAVVGCM PF+LGVCFLFPSMDCLWHKYHY
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA
        CPSCKEKVG+FEK+DRCAVMDPP+W Q SFALPA
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDG7 LITAF domain-containing protein

7.1e-66

86.47

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Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        MSK  EPVVGVP YVGNN YQAGQIPPNAIFGDP GVPI QTMYRDTPAPF C YCG  GLT +RSK+SSAAVVGCMMPFMLGVCFL PSMDCLWHKYHY
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALP
        CPSCKEKVG+FEKLDRCAVMDPPHW Q S+ALP
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALP

A0A5D3DMB0 Zf-LITAF-like domain-containing protein

9.3e-66

86.47

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Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        MSK  EPVVGVP YVGNN YQAGQIPPNAIFGDPQGVPI QTMYRDTPAPF C YCG  GLT +RSK+S AAVVGCMMPFMLGVCFL PSMDCLWHKYHY
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALP
        CPSCKEKVG+FEKLDRCAVMDPPHW Q S+ALP
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALP

A0A6J1D5M9 GSH-induced LITAF domain protein

1.1e-66

85.07

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Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        MSK DEPVVG+P Y G+NAYQAGQIP NAI+GDPQGVPI QTM+RDTPAPFYC YCG  GLT+VRSK+SSAAVVGCM+PFMLGVCFLFPSM+CLWHKYHY
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA
        CP+CKEKVG+FEKLDRCAVMDPPHW Q SFALPA
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA

A0A6J1GS01 GSH-induced LITAF domain protein

8.4e-67

86.57

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Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        MSK DEPVVG+PFYVGNNAYQAGQIPPNAIFG PQGVPIHQTMYRDTPAP+ C YCG  GLT++RSK+S AAVVGCMMPFMLGVCFL PSMDCLWHKYHY
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA
        CPSCKEKVG+FEK D CAVMDPPHW Q SFALPA
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA

A0A6J1JVN9 GSH-induced LITAF domain protein

1.1e-66

85.82

Show/hide

Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        MSK DEPVVG+PFYVGNN+YQAGQIPPNAIFG PQGVPIHQTMYRDTPAP+ C YCG  GLT++RSK+S AAVVGCMMPFMLGVCFL PSMDCLWHKYHY
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA
        CPSCKEKVG+FEK D CAVMDPPHW Q SFALPA
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA

SwissProt top hits

e value

%identity

Alignment

Q94CD4 GSH-induced LITAF domain protein

8.7e-53

67.91

Show/hide

Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        M+K    V+GVP+Y G N YQAG +PPNAI+GDP G PI QT+YRDTPAPF C YCG  GLT +RSK   AAVV CMMPFMLG CFL PSMDCLW+K H+
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA
        CP C  KV +FEK D C VMDPP W+Q SFALPA
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA

Arabidopsis top hits

e value

%identity

Alignment

AT5G13190.1 CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

6.2e-54

67.91

Show/hide

Query:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY
        M+K    V+GVP+Y G N YQAG +PPNAI+GDP G PI QT+YRDTPAPF C YCG  GLT +RSK   AAVV CMMPFMLG CFL PSMDCLW+K H+
Subjt:  MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHY

Query:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA
        CP C  KV +FEK D C VMDPP W+Q SFALPA
Subjt:  CPSCKEKVGEFEKLDRCAVMDPPHWRQESFALPA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCGAAGACCGACGAGCCGGTCGTCGGAGTTCCATTCTACGTCGGCAACAACGCGTATCAGGCCGGACAGATCCCGCCGAACGCCATTTTTGGCGATCCACAGGGAGT
TCCTATCCACCAGACCATGTACCGCGACACTCCCGCTCCTTTCTACTGTTTCTATTGTGGAACTCCCGGTCTCACCGCCGTCAGATCAAAGTTAAGTTCAGCTGCTGTCG
TTGGTTGTATGATGCCATTTATGCTGGGAGTATGCTTTCTTTTTCCTTCGATGGACTGCCTTTGGCATAAATATCACTATTGCCCCAGCTGCAAAGAAAAGGTTGGTGAA
TTTGAGAAATTGGATAGGTGTGCTGTGATGGATCCTCCACACTGGAGACAGGAAAGCTTTGCATTGCCTGCTTGA

mRNA sequence

Show/hide mRNA sequence

AGAAGGTCTTACGATGCCGTTTTACGTAGGGCCAAACCTAAACCAATCACAGCAACGTATTCATTTCCTTAACGAAGAAATTTCGCCGCAATTGCTCCGATCGTAATTCT
CCATCTCCGTCATCAATTTCTATTCCAAACAATTTTCAGATCGCCGGCGGAGAAGCAGAGAGAGAGAGAGAGAAAGGTTGGAACGATGTCGAAGACCGACGAGCCGGTCG
TCGGAGTTCCATTCTACGTCGGCAACAACGCGTATCAGGCCGGACAGATCCCGCCGAACGCCATTTTTGGCGATCCACAGGGAGTTCCTATCCACCAGACCATGTACCGC
GACACTCCCGCTCCTTTCTACTGTTTCTATTGTGGAACTCCCGGTCTCACCGCCGTCAGATCAAAGTTAAGTTCAGCTGCTGTCGTTGGTTGTATGATGCCATTTATGCT
GGGAGTATGCTTTCTTTTTCCTTCGATGGACTGCCTTTGGCATAAATATCACTATTGCCCCAGCTGCAAAGAAAAGGTTGGTGAATTTGAGAAATTGGATAGGTGTGCTG
TGATGGATCCTCCACACTGGAGACAGGAAAGCTTTGCATTGCCTGCTTGATTTTCATGAACTGCTTTTTTTTTCCGTGTGATTATTTTGCATCGTGTGCAGTCAGTATTT
GCTACTCTTGTGCTCTTTATGAGATGTTCTTGTTACACTCAGGGATAGACTAAATATCCATGCATATTTACAATTATGATAGAACCAAATATATCATGCCGCTTGTAAAT
ACCTTGTTCTTACATTGGCATTATTGCTTAATATGTCATACTGCTGGCTTAGTTTGGGCAAATCATTTCATAGACCTCTTGATCATTCACCTCACAAGTCAAGATTGAAT
ACAGTTGTCCAATTTATTTCCCATGGCTATTCACTATCTGCATCTCCCTAGCAACCGTGCACCTCATCGTGGACGAATCATCATAGGGTTTTCTTTTTTTCCTTCTTTGG
TTAGCTGGAATGTAGTCCAGTAAAGATCATAGGGTTTTCTTTTTTTTCTTCCTTCTTGAGTGGACTTGAATTCTGATCATTGATGATACTAGCTATTTGGTACCCAACAA
TGAAGAAACATCTAGGAAAAGATAATATAACCTGAGTTCATGCTGTGAAGCTTATGCAGGTAAAAAGAATCCAAGTTGATTGACCGGGTTTTTCGATCTGGAAGCGAAGG
TTCGGCATGAGAAATAAGAGCCAGTCTTGATAGCCGAAGAGACTGCCTGCAGGGTATGCCATTGCAGGATCTTCACTCAAACTTGAATATGCAGCTTTTACAGATCCCTT
TTATGGAGTTGCAGGCTGCAGGCAAGTCATCCTTGGCTACAATACATGACTCTCCATTCCCATGTTGAACCTTGCTTCCTCTCTTCCACATAAATCAGCTAGAATTGAAA
CTTCCTTCTAAATTGGCAGCCCTTTTGAACTAAAAGGAGAATTTATGTATGCATGTATGAATACCCTCCTTAATTGGCTTAGTTGTCAAGAAAGCCTCGTTGAACCAAAA
GGTCATGGATTCCATCCATCTGGGTCACCTATTTAGGAGTTTATTTCTTATGAATTATCTATATGTATTGGAGGGTCAAACAATTTGTTTTAGGAGAACAGTCGGGGCAC
ACTTAAGTGTTTTTGGACACTCACGGATGAATGTATGCATGTCTAGTTGTGTGTGTGCATTGGAGTTTGGTTTTTAAGTTAAACTCAGCAGCAGCTCCACAACAATCTAT
TGCGGTCTACACTCGTCGAGGTTGTCTGTCTCGGAATATATTCTTTATATGTAAAAATGTCGTTGGCTATTTCTATAGATCAAGCCCCCCACCCCCACAATGCCTATGTT
CAGAG

Protein sequence

Show/hide protein sequence

MSKTDEPVVGVPFYVGNNAYQAGQIPPNAIFGDPQGVPIHQTMYRDTPAPFYCFYCGTPGLTAVRSKLSSAAVVGCMMPFMLGVCFLFPSMDCLWHKYHYCPSCKEKVGE
FEKLDRCAVMDPPHWRQESFALPA

Sed0021477 (gene) of Chayote v1 genome