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Sed0021497 (gene) of Chayote v1 genome

Gene IDSed0021497
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG04:47042087..47042602
RNA-Seq ExpressionSed0021497
SyntenySed0021497
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]3.2e-3479.52Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND
        M L HLLKR++GVSA+PKGYCAVYVG+ QKKRF+IPI +LN+PCFQELLCQTEEEFGY+HPMGGLTIHCRDDIF++ IS +ND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]1.9e-3487.5Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISR
        MG+  LLKR+QGVS IPKGYCAVYVGE QKKRFVIPITHLNQ CFQELL QTEE+FGYHHPMGGLTIHCRDDIF+DLISR
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISR

KAE8645661.1 hypothetical protein Csa_020412 [Cucumis sativus]3.4e-2876.25Show/hide
Query:  HLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLNDQ
        H +KR   VS +PKGYCAVYVGE QKKRFVIPIT+LNQPCFQ+LL QT EEF Y+HPMGGLT HC DDIF+DLIS LN+Q
Subjt:  HLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLNDQ

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]1.3e-3585.54Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND
        M L HLLKRSQGVS+IPKGYCAVYVGE QKKRF+IPI++LNQPCFQELL QTEEEFGYHHPMGGLTIHC+D IF++LISRLND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]5.3e-3787.95Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND
        MGL  LLKR+QGVSA+PKGYCAVYVGE QKKRFVIPI++LNQPCFQELLCQ EEEFGY+HPMGGLTIHCRDDIF+DLISRLND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein9.7e-3785.54Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND
        M L HLLKR+QGVSA+PKGYCAVYVGE QKKRFVIPIT+LN+PCFQ+LLCQTEEEFGY+HPMGGLTIHCRDDIF+DLIS +ND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND

A0A0A0K5U4 Uncharacterized protein6.3e-3685.54Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND
        M L HLLKRSQGVS+IPKGYCAVYVGE QKKRF+IPI++LNQPCFQELL QTEEEFGYHHPMGGLTIHC+D IF++LISRLND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND

A0A0A0K5V1 Uncharacterized protein4.0e-3074.16Show/hide
Query:  MGLFHLLKRS-----QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLNDQ
        MGL  LL+RS     Q VS +PKGYCAVYVGE QKKRFVIPIT+LNQPCFQ+LL QT EEF Y+HPMGGLT HC DDIF+DLIS LN+Q
Subjt:  MGLFHLLKRS-----QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLNDQ

A0A5A7U363 Auxin-induced protein 15A-like1.6e-3479.52Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND
        M L HLLKR++GVSA+PKGYCAVYVG+ QKKRF+IPI +LN+PCFQELLCQTEEEFGY+HPMGGLTIHCRDDIF++ IS +ND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND

A0A6J1C4W2 auxin-responsive protein SAUR24-like2.6e-3787.95Show/hide
Query:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND
        MGL  LLKR+QGVSA+PKGYCAVYVGE QKKRFVIPI++LNQPCFQELLCQ EEEFGY+HPMGGLTIHCRDDIF+DLISRLND
Subjt:  MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLND

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG74.2e-2164Show/hide
Query:  SQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLNDQ
        S  V   PKGY AVYVGE   KRFVIP++HLNQP FQ+LL Q EEEFGY HPMGGLTI C +D+F  + S L+ Q
Subjt:  SQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLNDQ

Q9FJF6 Auxin-responsive protein SAUR231.1e-2158.44Show/hide
Query:  LLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLN
        L + +  VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL+
Subjt:  LLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLN

Q9FJF7 Auxin-responsive protein SAUR226.5e-2257.32Show/hide
Query:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRL
        +G   +L RS   VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++E+EFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRL

Q9FJG0 Auxin-responsive protein SAUR202.5e-2158.02Show/hide
Query:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISR
        +G   +L RS    SA PKG+ AVYVGE QKKR+++PI++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SR
Subjt:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISR

Q9FK62 Auxin-responsive protein SAUR242.2e-2258.54Show/hide
Query:  MGLFHLLKRSQGV-SAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRL
        +G   +L RS G  SA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLFHLLKRSQGV-SAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family7.9e-2360.49Show/hide
Query:  LFHLLKRSQGVSAIPKGYCAVYVGE-GQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLN
        L   L  S    AIPKG+ AVYVGE  QK+RFV+P+T+L+ PCFQ+LL + EEEFG+ HPMGGLTI C + IF DL SRL+
Subjt:  LFHLLKRSQGVSAIPKGYCAVYVGE-GQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLN

AT5G18020.1 SAUR-like auxin-responsive protein family1.8e-2258.02Show/hide
Query:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISR
        +G   +L RS    SA PKG+ AVYVGE QKKR+++PI++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SR
Subjt:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISR

AT5G18050.1 SAUR-like auxin-responsive protein family4.6e-2357.32Show/hide
Query:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRL
        +G   +L RS   VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++E+EFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLFHLLKRS-QGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRL

AT5G18060.1 SAUR-like auxin-responsive protein family7.9e-2358.44Show/hide
Query:  LLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLN
        L + +  VSA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL+
Subjt:  LLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLN

AT5G18080.1 SAUR-like auxin-responsive protein family1.6e-2358.54Show/hide
Query:  MGLFHLLKRSQGV-SAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRL
        +G   +L RS G  SA PKG+ AVYVGE QKKR+++P+++LNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ SRL
Subjt:  MGLFHLLKRSQGV-SAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTTTTCCATCTTCTCAAAAGAAGTCAAGGAGTTTCAGCAATTCCCAAGGGCTATTGTGCAGTCTATGTCGGAGAGGGCCAAAAGAAGCGGTTCGTGATCCCGAT
TACTCACTTGAATCAACCGTGTTTTCAAGAGTTGCTTTGTCAGACTGAGGAAGAATTCGGTTACCATCATCCGATGGGCGGTCTTACTATTCATTGCAGAGATGATATCT
TCAGTGATCTCATCTCCCGTTTGAATGATCAATGA
mRNA sequenceShow/hide mRNA sequence
TTACATTCTAATTTGAAACAAACTTTCTTCTCTCGCGTTTTACGATCTTCTTGTTGCTCTACTACATGGGGCTTTTCCATCTTCTCAAAAGAAGTCAAGGAGTTTCAGCA
ATTCCCAAGGGCTATTGTGCAGTCTATGTCGGAGAGGGCCAAAAGAAGCGGTTCGTGATCCCGATTACTCACTTGAATCAACCGTGTTTTCAAGAGTTGCTTTGTCAGAC
TGAGGAAGAATTCGGTTACCATCATCCGATGGGCGGTCTTACTATTCATTGCAGAGATGATATCTTCAGTGATCTCATCTCCCGTTTGAATGATCAATGAGAGATGTAGA
CAGTTATAGTATACAACCAATCTAATAGAATATAGACATTAGAAATAACCAAAACCATGTACATTTTTTTCATTTTCCTCACTTTTTTTGTTTCCTTTAGTGGGGAGTAA
AATAATGTTCCCCTGCTAGAGGAAGTTACCCAATGATGAAAATGAAATGGCCACACTTTTACAGGAAATTTAAGAG
Protein sequenceShow/hide protein sequence
MGLFHLLKRSQGVSAIPKGYCAVYVGEGQKKRFVIPITHLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRDDIFSDLISRLNDQ