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Sed0021519 (gene) of Chayote v1 genome

Gene IDSed0021519
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG01:12369361..12370225
RNA-Seq ExpressionSed0021519
SyntenySed0021519
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456286.1 PREDICTED: uncharacterized protein LOC103496246 [Cucumis melo]6.0e-5274.84Show/hide
Query:  MGLNTPER--------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGA
        M  +TPER        G SVLA+PRRAAATLLVSLSTLVALCAKQANRASKKLQ KLK KQLPRLE     +RPK F+K+IS+TA+TLI KKKN   GG 
Subjt:  MGLNTPER--------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGA

Query:  EIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
        + ++EWGD GVW+K ILMGDKCEPLDFSGVIYYDSNGKQLNEVP RSPRASPLPA LAT
Subjt:  EIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
XP_022137455.1 uncharacterized protein LOC111008895 [Momordica charantia]3.9e-5172.33Show/hide
Query:  MGLNTPERG------SSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKN----HGGA
        MG  TPERG       SVLASP+RAAATLL+SLSTLVALCAK+ANR SKKLQTKLK KQ PRLE     VRPK F+KSIS TA+TL+ K KN     GG 
Subjt:  MGLNTPERG------SSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKN----HGGA

Query:  EIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
        + +DEWGD G+W+K ILMGDKCEPL+FSGVIYYDS GKQLNEVPPRSPRASPLP+ LAT
Subjt:  EIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
XP_023001364.1 uncharacterized protein LOC111495524 [Cucurbita maxima]2.8e-4977.78Show/hide
Query:  GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKK---NHGGAEIKDEWGDDGVWRKT
        G SVLASPRRAAATLLVSLSTLVALCAK ANRASKKLQTKLK KQLPRLE     V PK  +KSIS+TA+TLI KKK    HG  + ++EWGD GVW+K 
Subjt:  GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKK---NHGGAEIKDEWGDDGVWRKT

Query:  ILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
        I+MGDKCEPL+FSGVIYYDSNGKQLNEVP RSPRASPLPA LAT
Subjt:  ILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
XP_023519722.1 uncharacterized protein LOC111783076 [Cucurbita pepo subsp. pepo]2.8e-4975.33Show/hide
Query:  GLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGAEIKDEWGDD
        G  +   G SVLASPRRAAATLLVSLSTLVALCAK ANRASKKLQTKLK KQLPRLE     V PK  +KSIS+TA+TLI KKK +  GG +  +EWGD 
Subjt:  GLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGAEIKDEWGDD

Query:  GVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
        GVW+K I+MGDKCEPL+FSGVIYYDSNGKQLNEVP RSPRASPLPA LAT
Subjt:  GVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
XP_038894891.1 uncharacterized protein LOC120083287 [Benincasa hispida]8.4e-5474.23Show/hide
Query:  MGLNTPER----------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKN-HGG
        MG  TPER          G SVLA+PRRAAATLL+SLSTLVALCAKQANRASKKLQTKLK KQLPRLE     +RPK F+K+IS+TA+TLI KKKN HGG
Subjt:  MGLNTPER----------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKN-HGG

Query:  AEIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLATRQY
           ++EWGD GVW+K ILMGDKCEPLDFSGVIYYDSNGKQLNEVP RSPRASPLPA LAT  +
Subjt:  AEIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLATRQY
TrEMBL top hitse value%identityAlignment
A0A1S3C2V4 uncharacterized protein LOC1034962462.9e-5274.84Show/hide
Query:  MGLNTPER--------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGA
        M  +TPER        G SVLA+PRRAAATLLVSLSTLVALCAKQANRASKKLQ KLK KQLPRLE     +RPK F+K+IS+TA+TLI KKKN   GG 
Subjt:  MGLNTPER--------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGA

Query:  EIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
        + ++EWGD GVW+K ILMGDKCEPLDFSGVIYYDSNGKQLNEVP RSPRASPLPA LAT
Subjt:  EIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
A0A5D3BIM5 Uncharacterized protein2.9e-5274.84Show/hide
Query:  MGLNTPER--------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGA
        M  +TPER        G SVLA+PRRAAATLLVSLSTLVALCAKQANRASKKLQ KLK KQLPRLE     +RPK F+K+IS+TA+TLI KKKN   GG 
Subjt:  MGLNTPER--------GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGA

Query:  EIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
        + ++EWGD GVW+K ILMGDKCEPLDFSGVIYYDSNGKQLNEVP RSPRASPLPA LAT
Subjt:  EIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
A0A6J1C6P8 uncharacterized protein LOC1110088951.9e-5172.33Show/hide
Query:  MGLNTPERG------SSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKN----HGGA
        MG  TPERG       SVLASP+RAAATLL+SLSTLVALCAK+ANR SKKLQTKLK KQ PRLE     VRPK F+KSIS TA+TL+ K KN     GG 
Subjt:  MGLNTPERG------SSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKN----HGGA

Query:  EIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
        + +DEWGD G+W+K ILMGDKCEPL+FSGVIYYDS GKQLNEVPPRSPRASPLP+ LAT
Subjt:  EIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
A0A6J1EAJ9 uncharacterized protein LOC1114313881.8e-4975.33Show/hide
Query:  GLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGAEIKDEWGDD
        G  +   G SVLASPRRAAATLLVSLSTLVALCAK ANRASKKLQTKLK KQLPRLE     V PK  +KSIS+TA+TLI KKK +  GG +  +EWGD 
Subjt:  GLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKKNH--GGAEIKDEWGDD

Query:  GVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
        GVW+K I+MGDKCEPL+FSGVIYYDSNGKQLNEVP RSPRASPLPA LAT
Subjt:  GVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
A0A6J1KMI5 uncharacterized protein LOC1114955241.4e-4977.78Show/hide
Query:  GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKK---NHGGAEIKDEWGDDGVWRKT
        G SVLASPRRAAATLLVSLSTLVALCAK ANRASKKLQTKLK KQLPRLE     V PK  +KSIS+TA+TLI KKK    HG  + ++EWGD GVW+K 
Subjt:  GSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----VRPKSFMKSISSTAMTLITKKK---NHGGAEIKDEWGDDGVWRKT

Query:  ILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
        I+MGDKCEPL+FSGVIYYDSNGKQLNEVP RSPRASPLPA LAT
Subjt:  ILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLAT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein2.0e-2443.95Show/hide
Query:  MGLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----------------VRPKSFMKSISSTAMTLITKKKNHG
        M  +TPE  SS   S +R + + LVS   ++ LCA+ ANR SKKL+ K K +     E                  RPK    ++S+ AMT++ ++KN  
Subjt:  MGLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLE-----------------VRPKSFMKSISSTAMTLITKKKNHG

Query:  GAEIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPA
          +      + G+W++ ILMG KCEPLDFSGVIYYDSNG+ LNEVPPRSPR +PLP+
Subjt:  GAEIKDEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPA
AT1G71740.1 unknown protein5.9e-0548.84Show/hide
Query:  VWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPL
        +W+K ILMG KC+  DFSGVI YD++G    +V P +  + PL
Subjt:  VWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPL
AT3G18560.1 unknown protein1.7e-2037.17Show/hide
Query:  MGLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQ---------------------------------LPRLEVRPKSFMKS
        M  +TPE  SS   + +R + + LVS   L+ LCA+ A+R SKKL+ K   KQ                                    + VRPK    +
Subjt:  MGLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQ---------------------------------LPRLEVRPKSFMKS

Query:  ISSTAMTLITKK-KNHGGAEIK---------DEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLATRQYI
        +S+ AMT++ +K K + G   K         ++  + GVW++ ILMG KCEPLD+SGVIYYD +G QL +VPPRSPRAS +P    TR Y+
Subjt:  ISSTAMTLITKK-KNHGGAEIK---------DEWGDDGVWRKTILMGDKCEPLDFSGVIYYDSNGKQLNEVPPRSPRASPLPALLATRQYI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTCAACACACCGGAACGCGGCAGCTCCGTCCTGGCGTCGCCGAGGCGAGCGGCGGCGACCTTGCTCGTCTCTTTATCGACTCTGGTGGCGCTGTGTGCGAAACA
AGCGAACAGAGCATCGAAGAAGCTCCAAACGAAACTGAAACTGAAGCAGTTGCCGCGATTAGAGGTCCGGCCGAAGAGTTTCATGAAGAGCATAAGCAGTACGGCGATGA
CGCTGATAACGAAGAAGAAGAACCACGGCGGCGCCGAAATAAAAGACGAGTGGGGAGACGACGGAGTGTGGCGGAAGACGATCTTGATGGGGGATAAGTGTGAGCCGTTG
GATTTCTCGGGCGTAATTTACTACGATAGTAACGGAAAGCAGCTGAACGAAGTGCCTCCACGCTCGCCACGTGCCAGTCCCTTGCCTGCCTTGCTTGCAACCCGCCAGTA
TATATCTTAA
mRNA sequenceShow/hide mRNA sequence
CCTCAATAAAAAAAAATTCATTTACCTTTCCGTTCCAAATTCCTTCAAGCATGGGCCTCAACACACCGGAACGCGGCAGCTCCGTCCTGGCGTCGCCGAGGCGAGCGGCG
GCGACCTTGCTCGTCTCTTTATCGACTCTGGTGGCGCTGTGTGCGAAACAAGCGAACAGAGCATCGAAGAAGCTCCAAACGAAACTGAAACTGAAGCAGTTGCCGCGATT
AGAGGTCCGGCCGAAGAGTTTCATGAAGAGCATAAGCAGTACGGCGATGACGCTGATAACGAAGAAGAAGAACCACGGCGGCGCCGAAATAAAAGACGAGTGGGGAGACG
ACGGAGTGTGGCGGAAGACGATCTTGATGGGGGATAAGTGTGAGCCGTTGGATTTCTCGGGCGTAATTTACTACGATAGTAACGGAAAGCAGCTGAACGAAGTGCCTCCA
CGCTCGCCACGTGCCAGTCCCTTGCCTGCCTTGCTTGCAACCCGCCAGTATATATCTTAACGTTACCCGGCGGTGATTTCAGGTAGGTCACCCACGCGTGTGATTAGATG
GGATGTGCGGCGTCGTTTTTATTTTGGCGGTGTTTTTCTTTTTTGCAAATTTCTATTTTTGTATAGTATTAAAGGTAAATTTTGTATGTCAAATATATATTTTGAAAGTA
ATCTTCGAAAATATTATGAATATGGATTTACTCAAAAAAAAAAAAAAAAGGTTATCAGTAAATAATTAGGTTCATACAACAAAATAAAACTTTACCAAACTATCATACTT
TGGTAAGTTTTTTTTTTCCTAGGATCTATTTGTTTTTTAGACATGAGGAGTGGCACAACTCCTAAAAATCGTTGTTTATTTTTTTTGCAGTAAAT
Protein sequenceShow/hide protein sequence
MGLNTPERGSSVLASPRRAAATLLVSLSTLVALCAKQANRASKKLQTKLKLKQLPRLEVRPKSFMKSISSTAMTLITKKKNHGGAEIKDEWGDDGVWRKTILMGDKCEPL
DFSGVIYYDSNGKQLNEVPPRSPRASPLPALLATRQYIS