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Sed0021533 (gene) of Chayote v1 genome

Gene IDSed0021533
OrganismSechium edule (Chayote v1)
DescriptionPyrD
Genome locationLG10:34831550..34836166
RNA-Seq ExpressionSed0021533
SyntenySed0021533
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607600.1 hypothetical protein SDJN03_00942, partial [Cucurbita argyrosperma subsp. sororia]7.1e-4489.22Show/hide
Query:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV
        MSLACLVCNSVESP+HSFRSYSVSSSDNEGRC+ MANCLIWRPSFPPTHHPSYA SAKVTPHPNI  S+  MDG PRLVRSRAVRRDLV+DWNFDEVVVV
Subjt:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV

Query:  QH
        QH
Subjt:  QH

XP_004139698.1 uncharacterized protein LOC101218997 [Cucumis sativus]6.5e-4590.2Show/hide
Query:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV
        MSLACLVCNSVESP+HSFRSYSVSSSDNEGRCS MANCLIWRPSFPPTHHPSYAASAKVTP P +++S+V MDGTPRLVRSRAVRRDLV+DWNFDEVVVV
Subjt:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV

Query:  QH
        QH
Subjt:  QH

XP_016902709.1 PREDICTED: uncharacterized protein LOC103500045 [Cucumis melo]4.5e-4692.16Show/hide
Query:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV
        MSLACLVCNSVESP+HSFRSYSVSSSDNEGRCS MANCLIWRPSFPPTHHPSYAASAKVTP P I+NSNV MDGTPRLVRSRAV+RDLV+DWNFDEVVVV
Subjt:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV

Query:  QH
        QH
Subjt:  QH

XP_023522659.1 uncharacterized protein LOC111786655 [Cucurbita pepo subsp. pepo]1.9e-4490.2Show/hide
Query:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV
        MSLACLVCNSVESP+HSFRSYSVSSSDNEGRC+ MANCLIWRPSFPPTHHPSYAASAKVTPHPNI  S+  MDG PRLVRSRAVRRDLV+DWNFDEVVVV
Subjt:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV

Query:  QH
        QH
Subjt:  QH

XP_038898475.1 uncharacterized protein LOC120086102 [Benincasa hispida]1.0e-4592.16Show/hide
Query:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV
        MSLACLVCNSVESP+HSFRSYSVSSSDNEGRCS MANCLIWRPSFPP HHPSYAASAKVTP P I+NSNV MDGTPRLVRSRAVRRDLV+DWNFDEVVVV
Subjt:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV

Query:  QH
        QH
Subjt:  QH

TrEMBL top hitse value%identityAlignment
A0A0A0K7X5 Uncharacterized protein3.1e-4590.2Show/hide
Query:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV
        MSLACLVCNSVESP+HSFRSYSVSSSDNEGRCS MANCLIWRPSFPPTHHPSYAASAKVTP P +++S+V MDGTPRLVRSRAVRRDLV+DWNFDEVVVV
Subjt:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV

Query:  QH
        QH
Subjt:  QH

A0A1S4E3A0 uncharacterized protein LOC1035000452.2e-4692.16Show/hide
Query:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV
        MSLACLVCNSVESP+HSFRSYSVSSSDNEGRCS MANCLIWRPSFPPTHHPSYAASAKVTP P I+NSNV MDGTPRLVRSRAV+RDLV+DWNFDEVVVV
Subjt:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV

Query:  QH
        QH
Subjt:  QH

A0A6J1C1C6 uncharacterized protein LOC1110074775.9e-4488.35Show/hide
Query:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPT-HHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVV
        MSLAC+VCNSVESP+HSFRSYSVSSSDNEGRCS MANCL+WRPSFPPT HHPSYAASAKVTP P I NSN G+DGTPRLVRSRAVRRDLV+DWNFDEV V
Subjt:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPT-HHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVV

Query:  VQH
        VQH
Subjt:  VQH

A0A6J1F1B0 uncharacterized protein LOC1114384254.5e-4489.22Show/hide
Query:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV
        MSLACLVCNSVESP+HSFRSYSVSSSDNEGRC+ MANCLIWRPSFPPTHHPSYAASAKVTPHPNI  S+  MDG P LVRSRAVRRDLV+DWNFDEVVVV
Subjt:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVV

Query:  QH
        QH
Subjt:  QH

A0A6J1INM3 uncharacterized protein LOC1114771651.3e-4387.62Show/hide
Query:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPT---HHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEV
        MSLACLVCNSV+SP+HS RSYSVSSSDNEGRCS +ANCLIWRPSFPPT   HHPSY ASAKVTP P I+NSNV MDGTPRLVRSRAVRRDLVQDWNFDEV
Subjt:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPT---HHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEV

Query:  VVVQH
        VVVQH
Subjt:  VVVQH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71865.1 unknown protein1.3e-2763.27Show/hide
Query:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTH-HPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEV
        MS ACLVC+SVESP+HSFRSYSVSSSDNEGRCSV+A+CL  +        +P  A+S+KVTP PN      G   +PRLVRSRAVRRD+V+DWNF+E+
Subjt:  MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTH-HPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCTGGCATGTCTTGTATGCAATAGTGTAGAGAGCCCTACGCACTCGTTTAGGAGCTATTCGGTTTCGAGCTCAGACAATGAGGGAAGATGTTCCGTGATGGCCAA
CTGCCTAATTTGGAGACCATCTTTTCCTCCAACACACCACCCGTCGTATGCAGCGTCAGCCAAGGTAACTCCCCATCCAAACATTGCCAACAGCAACGTAGGAATGGATG
GTACGCCGAGGCTGGTGCGAAGCCGGGCAGTAAGAAGGGACCTGGTACAAGACTGGAATTTCGACGAGGTGGTTGTAGTTCAGCATTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATTCTTTCGATATCTGTCGGTGCCTCATCTAAAAACGGACGTGGTTATCCTGTTTCAAAAATAAATAAAAGTAGGGAATAATAAAGTCCACTCTCGGGGTCTCACTCCCA
TTACAGATCCCCCATTCTCTCCCCTCAGCTTTTCGGAATCTTAAGCTTCCACCAACGGGAAGAACAACAACAACAACAATTGCAGCTGGGAACCGAGAGTTGCTAGACGT
CTAAAACTATGAGCCTGGCATGTCTTGTATGCAATAGTGTAGAGAGCCCTACGCACTCGTTTAGGAGCTATTCGGTTTCGAGCTCAGACAATGAGGGAAGATGTTCCGTG
ATGGCCAACTGCCTAATTTGGAGACCATCTTTTCCTCCAACACACCACCCGTCGTATGCAGCGTCAGCCAAGGTAACTCCCCATCCAAACATTGCCAACAGCAACGTAGG
AATGGATGGTACGCCGAGGCTGGTGCGAAGCCGGGCAGTAAGAAGGGACCTGGTACAAGACTGGAATTTCGACGAGGTGGTTGTAGTTCAGCATTTGTAAGTTTTAAGGT
TTGAGAAGAACAGACAGAGTAGTAGGGTCTTCAAATGGCCTGAAAATGATGGGGGTAGCATCTTGCTTCCTATGTATTTTTGTTTTCTTATGGGTACAACTGAAAACTCA
CACTTCCAGTGGAAGAGTTTGCACATTTGTAAGCATGAGAAAATGGGATTTAGAACTTTGTTTATATATTACCTACTTACTACTGATTCATAGGAGGCAGAGGTTGGGCT
GGGTTTAATTAGTACTTGTAAACTTGAGTGGAATTGTGCTTTCAAAGTTTTCTATGATATACACCAAGTTTATTTGCA
Protein sequenceShow/hide protein sequence
MSLACLVCNSVESPTHSFRSYSVSSSDNEGRCSVMANCLIWRPSFPPTHHPSYAASAKVTPHPNIANSNVGMDGTPRLVRSRAVRRDLVQDWNFDEVVVVQHL