; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0021540 (gene) of Chayote v1 genome

Gene IDSed0021540
OrganismSechium edule (Chayote v1)
DescriptionRetrotransposon protein
Genome locationLG12:34031653..34032964
RNA-Seq ExpressionSed0021540
SyntenySed0021540
Gene Ontology termsNA
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-11956.14Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL A+IR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF
                KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T      +D   I+++ETS  W+ +RD++A  MF
Subjt:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]7.9e-12056.4Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL A+IR HD L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF
                KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T      +D   I+++ETS  W+ +RD++A  MF
Subjt:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF

KAA0047510.1 retrotransposon protein [Cucumis melo var. makuwa]7.4e-11855.61Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CRE+TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC
        LHI+AHDVKNRV++R F RSGET+S HF  VL A+IR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR NG +VP GYYYL DAGYPN +GFLAPYRG+RYHL +W G  N P   +EFFN  H SARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF
                KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T      +D   I+++ETS  W+ +RD +A  MF
Subjt:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF

KAA0048361.1 retrotransposon protein [Cucumis melo var. makuwa]4.3e-11855.87Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL A+IR H+ L KKP+P+   CTD RWKWFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEG AADSR+LRDALSR N  +VP GYYYL DAGY NA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF
                KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T      +D   I+++ETS  W+ +RD++A  MF
Subjt:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF

KAA0051057.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-11755.35Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL C ++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC
        LHI+ HDVKNRV++R F RSGET+SRHF  VL A+IR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HS ARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF
                KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T      +D   I+++ETS  W+ +RD++A  MF
Subjt:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF

TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein3.6e-11855.61Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CRE+TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC
        LHI+AHDVKNRV++R F RSGET+S HF  VL A+IR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR NG +VP GYYYL DAGYPN +GFLAPYRG+RYHL +W G  N P   +EFFN  H SARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF
                KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T      +D   I+++ETS  W+ +RD +A  MF
Subjt:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF

A0A5A7TXW1 Retrotransposon protein3.8e-12056.4Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL A+IR HD L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF
                KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T      +D   I+++ETS  W+ +RD++A  MF
Subjt:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF

A0A5A7U476 Retrotransposon protein2.1e-11855.87Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL A+IR H+ L KKP+P+   CTD RWKWFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEG AADSR+LRDALSR N  +VP GYYYL DAGY NA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF
                KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T      +D   I+++ETS  W+ +RD++A  MF
Subjt:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF

A0A5A7U9H2 Retrotransposon protein6.1e-11855.35Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL C ++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC
        LHI+ HDVKNRV++R F RSGET+SRHF  VL A+IR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HS ARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF
                KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T      +D   I+++ETS  W+ +RD++A  MF
Subjt:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF

A0A5D3BDX0 Retrotransposon protein1.1e-11956.14Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL A+IR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP GYYYL DAGYPNA+GFLAPYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF
                KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T      +D   I+++ETS  W+ +RD++A  MF
Subjt:  TIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein1.7e-4340.31Show/hide
Query:  IRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTA--LIRCHDI-------LYK
        ++Q   AC +  RM+  CF TLC+ML+T+  L+ T  I +EE VAMFL I  H+   R V   F R+ ETV R F+ VLTA  L+ C  I       LY+
Subjt:  IRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTA--LIRCHDI-------LYK

Query:  KPEPIQPSCTDSR-WKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHG-YYYL
         PE +Q    D R W +F   +GA+DGTH+ ++V  + +  + NR    + N++A+C     F Y+  G  GS  D+ VL+ A   ++ F +P    YYL
Subjt:  KPEPIQPSCTDSR-WKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHG-YYYL

Query:  CDAGYPNADGFLAPYRGE-----RYHLSDWRGSNPPRNPREFFNKAHSSARNIIERAF
         D+GYPN  G LAPYR       RYH+S +     PRN  E FN+ H+S R++IER F
Subjt:  CDAGYPNADGFLAPYRGE-----RYHLSDWRGSNPPRNPREFFNKAHSSARNIIERAF

AT5G28730.1 unknown protein1.2e-2031.51Show/hide
Query:  IRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSC
        I  ++++C+   RM+   F  LC++L    GL+ +  I ++E VA+FL I A +   R +   F  + ET+ R F  VL A+ R   + Y +P  ++   
Subjt:  IRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSC

Query:  TDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQV-PHGYYYLCDAGYPNADG
                      L      +Q          +  GI + NVLA+C     F Y   G  GS  D+RVL  A+S +  F V P   YYL D+GY N  G
Subjt:  TDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQV-PHGYYYLCDAGYPNADG

Query:  FLAPYRGERYHLSDWRGSN
        +LAPYR E     D   +N
Subjt:  FLAPYRGERYHLSDWRGSN

AT5G28950.1 unknown protein1.1e-1843.48Show/hide
Query:  WKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRN-NGFQVP---HGYYYLCDAGYPNADGF
        + +F++C+GA+D THI   V  +   SFRNRKG I+ N+LA C    EF+YVL+GWEGSA DS+VL DAL+RN N   VP        + +    N D  
Subjt:  WKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRN-NGFQVP---HGYYYLCDAGYPNADGF

Query:  LAPYRGERYHLSDWR
        L     +R + + WR
Subjt:  LAPYRGERYHLSDWR

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)8.7e-2438.38Show/hide
Query:  FIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGS-NPPRNPREFFNKAHSSARNIIERAFGALKTIGLF
        FIYVL+GWEGSA DSRVL DAL +          +YL D G+ N   FLAP+RG RYHL ++ G    P  P E FN  H S RN+IER FG  K+   F
Subjt:  FIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGS-NPPRNPREFFNKAHSSARNIIERAFGALKTIGLF

Query:  SWHKSFYP--PKVQVKIITACCLLHNLI---CREMGSTIGLEILGENDATLYQEEMEDTPTINFV----------ETSPLWTTFRDSMARRMFDAAQN
        +  KS  P   K Q  ++  C  LHN +   CR   +    E+  E D    +    +T  I+            E + +W   R SMA  M+  A N
Subjt:  SWHKSFYP--PKVQVKIITACCLLHNLI---CREMGSTIGLEILGENDATLYQEEMEDTPTINFV----------ETSPLWTTFRDSMARRMFDAAQN

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.8e-5439.06Show/hide
Query:  CRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCT-DSRWK
        C E  RM++  F  LCD+L+T G LR T+ I +E  +A+FL I+ H+++ R V+ +F  SGET+SRHF +VL A+I      +   +P   S T ++   
Subjt:  CRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCT-DSRWK

Query:  WFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRG
        +F++C+G +D  HI + V V+ +  FRN  G++T NVLA  +    F YVLAGWEGSA+D +VL  AL+R N  QVP G YY+ D  YPN  GF+APY G
Subjt:  WFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRG

Query:  ERYHLSDWRGSNPPRNPREFFNKAHSSARNIIERAFGALKTIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEME
                  +N     +E FN+ H      I R FGALK           YP + QVK++ A C LHN +  E    +   +  E       E+ E
Subjt:  ERYHLSDWRGSNPPRNPREFFNKAHSSARNIIERAFGALKTIGLFSWHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCCGATAAAACTATAGCAGTTTTAACAATACTCTACACATGGCAGAACCAGTTTCTTCTTCTTGCAAATCTTATAATGAACTACAACCCTAGGACCAAAAATTA
TTGCTCTTTCTTTAGACACCATTTTCGCCAAATGACTTTCTTCTCGATGATAAGACAAAGCGATCTAGCTTGTCGTGAGACAACTAGAATGAATCGTAGCTGCTTTGAAA
CCTTGTGCGACATGCTAAGGACCCACGGTGGTCTTCGAGGTACGGATTACATCGACGTGGAGGAAATGGTAGCCATGTTTCTACATATCATGGCTCATGATGTTAAGAAC
CGCGTCGTTCGAAGAATATTTACAAGATCTGGCGAGACAGTGTCGCGACACTTTCAATCTGTCCTTACTGCTCTGATTCGTTGTCATGACATTTTGTACAAGAAACCTGA
ACCTATCCAACCATCATGCACTGATAGTAGATGGAAGTGGTTTGAGAATTGTCTAGGTGCATTGGATGGTACTCATATAGAGATACAAGTCCCAGTTGAAAATCGTGCCT
CCTTTAGAAATAGGAAGGGTATTATCACAACAAACGTTCTTGCTGTATGCGCTCCAAGCGGAGAGTTCATATACGTACTAGCTGGGTGGGAGGGATCAGCAGCTGACTCT
AGAGTTCTTAGGGATGCTTTATCCCGTAACAATGGATTTCAAGTCCCTCATGGATACTATTACCTTTGTGATGCGGGTTATCCAAATGCTGATGGATTCTTAGCTCCCTA
TAGAGGCGAACGTTATCATCTATCGGATTGGAGGGGTAGCAATCCACCACGAAATCCGAGGGAGTTTTTTAATAAAGCACACTCTTCGGCACGAAATATAATAGAAAGAG
CATTCGGTGCATTAAAAACCATTGGGCTATTCTCATGGCACAAGTCTTTCTATCCTCCGAAAGTACAAGTGAAGATCATAACAGCTTGTTGTCTCCTACATAATTTAATA
TGTAGGGAGATGGGCTCTACGATTGGTTTAGAGATATTAGGGGAAAACGATGCCACACTCTACCAAGAGGAAATGGAGGATACCCCGACGATTAATTTCGTCGAGACATC
GCCTCTTTGGACCACATTTCGAGATTCCATGGCCCGAAGAATGTTTGACGCAGCCCAAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCCCGATAAAACTATAGCAGTTTTAACAATACTCTACACATGGCAGAACCAGTTTCTTCTTCTTGCAAATCTTATAATGAACTACAACCCTAGGACCAAAAATTA
TTGCTCTTTCTTTAGACACCATTTTCGCCAAATGACTTTCTTCTCGATGATAAGACAAAGCGATCTAGCTTGTCGTGAGACAACTAGAATGAATCGTAGCTGCTTTGAAA
CCTTGTGCGACATGCTAAGGACCCACGGTGGTCTTCGAGGTACGGATTACATCGACGTGGAGGAAATGGTAGCCATGTTTCTACATATCATGGCTCATGATGTTAAGAAC
CGCGTCGTTCGAAGAATATTTACAAGATCTGGCGAGACAGTGTCGCGACACTTTCAATCTGTCCTTACTGCTCTGATTCGTTGTCATGACATTTTGTACAAGAAACCTGA
ACCTATCCAACCATCATGCACTGATAGTAGATGGAAGTGGTTTGAGAATTGTCTAGGTGCATTGGATGGTACTCATATAGAGATACAAGTCCCAGTTGAAAATCGTGCCT
CCTTTAGAAATAGGAAGGGTATTATCACAACAAACGTTCTTGCTGTATGCGCTCCAAGCGGAGAGTTCATATACGTACTAGCTGGGTGGGAGGGATCAGCAGCTGACTCT
AGAGTTCTTAGGGATGCTTTATCCCGTAACAATGGATTTCAAGTCCCTCATGGATACTATTACCTTTGTGATGCGGGTTATCCAAATGCTGATGGATTCTTAGCTCCCTA
TAGAGGCGAACGTTATCATCTATCGGATTGGAGGGGTAGCAATCCACCACGAAATCCGAGGGAGTTTTTTAATAAAGCACACTCTTCGGCACGAAATATAATAGAAAGAG
CATTCGGTGCATTAAAAACCATTGGGCTATTCTCATGGCACAAGTCTTTCTATCCTCCGAAAGTACAAGTGAAGATCATAACAGCTTGTTGTCTCCTACATAATTTAATA
TGTAGGGAGATGGGCTCTACGATTGGTTTAGAGATATTAGGGGAAAACGATGCCACACTCTACCAAGAGGAAATGGAGGATACCCCGACGATTAATTTCGTCGAGACATC
GCCTCTTTGGACCACATTTCGAGATTCCATGGCCCGAAGAATGTTTGACGCAGCCCAAAACTAG
Protein sequenceShow/hide protein sequence
MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKN
RVVRRIFTRSGETVSRHFQSVLTALIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLAVCAPSGEFIYVLAGWEGSAADS
RVLRDALSRNNGFQVPHGYYYLCDAGYPNADGFLAPYRGERYHLSDWRGSNPPRNPREFFNKAHSSARNIIERAFGALKTIGLFSWHKSFYPPKVQVKIITACCLLHNLI
CREMGSTIGLEILGENDATLYQEEMEDTPTINFVETSPLWTTFRDSMARRMFDAAQN