CuGenDBv2

Gene ID	Sed0021560
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein, putative
Genome location	LG10:3082022..3082847
RNA-Seq Expression	Sed0021560
Synteny	Sed0021560
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008441005.1 PREDICTED: uncharacterized protein LOC103485248 [Cucumis melo]

1.5e-71

75.26

Show/hide

Query:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR
        MAD ET  RQ P+I KE+ +QALNTIIQLHFEKTLEKK AIDLQKK L KLFQLFF+FL+L+FL  SLSPRL+CRHCWIPI LLS +HLSFY+S+AQTLR
Subjt:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR

Query:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS
        C+N FKYQRRCHKLTLG AT++LR+  ++IS    GG DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMISSSVVLLCS
Subjt:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

XP_011657774.1 uncharacterized protein LOC101206076 [Cucumis sativus]

1.6e-70

74.21

Show/hide

Query:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR
        MAD +T  RQ P+I KE+ +QALNTIIQLHFEKTLEKK AIDLQKK L KLFQLFF+FL+L+FL  SLSPRL+CRHCWIPI LLS +HLSFY+S+AQTLR
Subjt:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR

Query:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS
        C+N FKYQRRCHKLTLG AT++LR+  ++IS     G DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMISSSVVLLCS
Subjt:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

XP_022949634.1 uncharacterized protein LOC111452966 [Cucurbita moschata]

4.7e-70

75.13

Show/hide

Query:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR
        MAD E   R  P+I  E+ +QALNT+IQLHFEKTLEKK AIDLQKK L  LF LFF+FL+L+FLA SLSPRLQCRHCWIPI LLS +HL+FY+S+AQTLR
Subjt:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR

Query:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS---GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS
        C+NAFKYQRRCHKLTLGLAT+KLR   +RIS   GG DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMISSSVVLLCS
Subjt:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS---GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

XP_022977846.1 uncharacterized protein LOC111478021 [Cucurbita maxima]

1.0e-69

74.6

Show/hide

Query:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR
        MAD E   R  P+I  E+ +QALNT+IQLHFEKTLEKK AIDLQKK L  LF LFF+FL+L+FLA SLSPRLQCRHCWIPI LLS +HL+FY+S+AQTLR
Subjt:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR

Query:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRISGGG---DGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS
        C+NAFKYQRRCHKLTLGLAT+KLR   +RIS  G   DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMISSSVVLLCS
Subjt:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRISGGG---DGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

XP_038883211.1 uncharacterized protein LOC120074230 [Benincasa hispida]

2.9e-72

Show/hide

Query:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR
        MAD ET  RQ P+I K++ +QALNTIIQLHFEKTLEKK AIDLQKK L KLFQLFF+FL L+FLA SLSPRL+CRHCWIPI LLS +HLSFY+S+AQTLR
Subjt:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR

Query:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS------GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS
        C+N FKYQRRCHKLTLG AT++LR+  ++IS      GG DGG  D EF+I YQEPPESYLGKFKRNWALYF FL+FIY FMISSSVVLLCS
Subjt:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS------GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKV5 Uncharacterized protein

7.8e-71

74.21

Show/hide

Query:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR
        MAD +T  RQ P+I KE+ +QALNTIIQLHFEKTLEKK AIDLQKK L KLFQLFF+FL+L+FL  SLSPRL+CRHCWIPI LLS +HLSFY+S+AQTLR
Subjt:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR

Query:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS
        C+N FKYQRRCHKLTLG AT++LR+  ++IS     G DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMISSSVVLLCS
Subjt:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

A0A1S3B333 uncharacterized protein LOC103485248

7.1e-72

75.26

Show/hide

Query:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR
        MAD ET  RQ P+I KE+ +QALNTIIQLHFEKTLEKK AIDLQKK L KLFQLFF+FL+L+FL  SLSPRL+CRHCWIPI LLS +HLSFY+S+AQTLR
Subjt:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR

Query:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS
        C+N FKYQRRCHKLTLG AT++LR+  ++IS    GG DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMISSSVVLLCS
Subjt:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS----GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

A0A6J1BTW4 uncharacterized protein LOC111005723

1.4e-67

74.19

Show/hide

Query:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR
        MAD E+  RQ P+I+K++ +QALNTIIQLHFEKTLEKK AIDLQKK L  LFQLFF+FL L+FLA SLSPRLQCRH WIPI LLS +HLSFY+S+A TLR
Subjt:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR

Query:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRISGGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS
        C+N FKYQRRCHKLTLGLATQKLR+     S        D EF+I YQEPPESYLGKFKRNWAL+F FL+FIYAFMISSSVVLLCS
Subjt:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRISGGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

A0A6J1GDE2 uncharacterized protein LOC111452966

2.3e-70

75.13

Show/hide

Query:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR
        MAD E   R  P+I  E+ +QALNT+IQLHFEKTLEKK AIDLQKK L  LF LFF+FL+L+FLA SLSPRLQCRHCWIPI LLS +HL+FY+S+AQTLR
Subjt:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR

Query:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS---GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS
        C+NAFKYQRRCHKLTLGLAT+KLR   +RIS   GG DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMISSSVVLLCS
Subjt:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRIS---GGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

A0A6J1IL37 uncharacterized protein LOC111478021

5.1e-70

74.6

Show/hide

Query:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR
        MAD E   R  P+I  E+ +QALNT+IQLHFEKTLEKK AIDLQKK L  LF LFF+FL+L+FLA SLSPRLQCRHCWIPI LLS +HL+FY+S+AQTLR
Subjt:  MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLR

Query:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRISGGG---DGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS
        C+NAFKYQRRCHKLTLGLAT+KLR   +RIS  G   DGG  D EF+I YQEPPESYLGKFKRNWAL+F FL+FIY FMISSSVVLLCS
Subjt:  CVNAFKYQRRCHKLTLGLATQKLRDFNLRISGGG---DGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G18800.1 unknown protein

2.3e-62

64.58

Show/hide

Query:  DSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSL-SPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRC
        D E  +   P I KE+ +QALN+IIQLHFEKTLEKK AID QKK L KLFQLFF+FL+++F +LS  S RL CRHCW PICLLS +HL FY+S+AQTLRC
Subjt:  DSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSL-SPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRC

Query:  VNAFKYQRRCHKLTLGLATQKLRDFNLRISGGGDGGGFDG--------EFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLC
        +N FKYQRRCHKLTLGLAT KLR    RI+ G   GG DG        + ++ YQEPP+SY GKFKRNWALYF FL+ +Y FMIS SVV+LC
Subjt:  VNAFKYQRRCHKLTLGLATQKLRDFNLRISGGGDGGGFDG--------EFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGATTCGGAAACCGTAAGAAGGCAAAGCCCGGCGATCTGGAAAGAAAGCGGCGTGCAAGCGCTGAACACCATAATCCAACTCCACTTCGAGAAAACCCTGGAGAA
GAAGGGCGCCATAGATCTGCAGAAGAAAGCTCTGCAGAAGCTGTTCCAGCTGTTCTTCCTCTTCCTCAGCCTCGTCTTCCTCGCCCTCTCCCTCTCCCCCCGCCTCCAAT
GCCGCCACTGCTGGATCCCCATCTGCCTCCTCTCCGCCGCCCATCTCAGCTTCTACCTCTCCCTCGCCCAAACCCTCCGCTGCGTCAACGCCTTCAAGTACCAGCGCCGC
TGCCACAAGCTCACCCTCGGTTTGGCCACCCAGAAGCTCAGGGACTTCAATCTCAGGATCAGCGGCGGCGGCGACGGAGGGGGCTTTGATGGGGAGTTTGACATTTCCTA
CCAGGAGCCGCCGGAGAGCTATTTGGGTAAGTTTAAGAGGAATTGGGCTCTCTATTTTGCCTTTTTGCTTTTTATTTATGCCTTTATGATTTCTTCCTCTGTTGTTCTTC
TCTGTTCTTGA

mRNA sequence

Show/hide mRNA sequence

CCAAAAATGCATTTAATCCCCAATCTTGAACCGAGTCTTGACAAAGCTCTCCCCAGTCCTCCAAAGCAGAGGTTGAAAAGGTGGGAACCATGGCGGATTCGGAAACCGTA
AGAAGGCAAAGCCCGGCGATCTGGAAAGAAAGCGGCGTGCAAGCGCTGAACACCATAATCCAACTCCACTTCGAGAAAACCCTGGAGAAGAAGGGCGCCATAGATCTGCA
GAAGAAAGCTCTGCAGAAGCTGTTCCAGCTGTTCTTCCTCTTCCTCAGCCTCGTCTTCCTCGCCCTCTCCCTCTCCCCCCGCCTCCAATGCCGCCACTGCTGGATCCCCA
TCTGCCTCCTCTCCGCCGCCCATCTCAGCTTCTACCTCTCCCTCGCCCAAACCCTCCGCTGCGTCAACGCCTTCAAGTACCAGCGCCGCTGCCACAAGCTCACCCTCGGT
TTGGCCACCCAGAAGCTCAGGGACTTCAATCTCAGGATCAGCGGCGGCGGCGACGGAGGGGGCTTTGATGGGGAGTTTGACATTTCCTACCAGGAGCCGCCGGAGAGCTA
TTTGGGTAAGTTTAAGAGGAATTGGGCTCTCTATTTTGCCTTTTTGCTTTTTATTTATGCCTTTATGATTTCTTCCTCTGTTGTTCTTCTCTGTTCTTGATTCCCGATTT
CGTTCCACATTTCAATTCCTAACTTCTTCAGATTTATTTTTTAGTGTTTGGTTTCGCCTGTTTGAATTTTTTTTGTTTTCTCACTGTAATTTAATTTGTTTGTTCTCATT
TTCTATCTATATATATTGAATTACCATTTTATGTTGGGTATTGTAGTCAATCAATC

Protein sequence

Show/hide protein sequence

MADSETVRRQSPAIWKESGVQALNTIIQLHFEKTLEKKGAIDLQKKALQKLFQLFFLFLSLVFLALSLSPRLQCRHCWIPICLLSAAHLSFYLSLAQTLRCVNAFKYQRR
CHKLTLGLATQKLRDFNLRISGGGDGGGFDGEFDISYQEPPESYLGKFKRNWALYFAFLLFIYAFMISSSVVLLCS

Sed0021560 (gene) of Chayote v1 genome