| GenBank top hits | e value | %identity | Alignment |
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 1.3e-73 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAA GGRG+GGPGGKPG NRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| XP_011653886.2 probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis sativus] | 2.8e-73 | 96.64 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKA+ GGRG+GGPGGKPG NRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| XP_022926288.1 sm-like protein LSM4 isoform X1 [Cucurbita moschata] | 1.9e-74 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAA GGRG+GGPGGKPG NRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| XP_022975088.1 sm-like protein LSM4 isoform X1 [Cucurbita maxima] | 4.8e-73 | 95.97 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GREDGPGGRP+KGMGRGFDDGAKAA GGRG+GG GGKPG NRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| XP_038896461.1 uncharacterized protein LOC120084721 [Benincasa hispida] | 4.3e-74 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GREDGPGGRPAKGMGRGFDD AKAA GGRG+GGPGGKPG NRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 6.1e-74 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAA GGRG+GGPGGKPG NRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| A0A6J1CRC5 U6 snRNA-associated Sm-like protein LSm4 | 3.9e-73 | 95.3 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP G+GRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GREDGPGGRPAKGMGRGFDDG+KA+ GGRG+GGPGGKPG NRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| A0A6J1EHL8 U6 snRNA-associated Sm-like protein LSm4 | 9.3e-75 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAA GGRG+GGPGGKPG NRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| A0A6J1ID83 U6 snRNA-associated Sm-like protein LSm4 | 2.3e-73 | 95.97 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GREDGPGGRP+KGMGRGFDDGAKAA GGRG+GG GGKPG NRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 9.3e-75 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAA GGRG+GGPGGKPG NRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 8.8e-54 | 78.52 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
G +DG GA+ GRGRG GK G NR GRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| Q3ZBK6 U6 snRNA-associated Sm-like protein LSm4 | 4.7e-39 | 62.25 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE V +GRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGG-PG-GKPGPNRVGGRGRG
G + + GRG + GGRGRGG PG G+ P + GR G
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGG-PG-GKPGPNRVGGRGRG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 5.3e-59 | 82 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKPPGVGR R R
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: -GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GR+D GR KG+GRG DDG GRG+GGP K G R GGRGRG
Subjt: -GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 4.5e-58 | 83.44 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPGVGRGRG
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEET KSR+DR+PPGVGRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPGVGRGRG
Query: RGR-EDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
RG PGGR G+GRG DDG GGRGRGG GGK G + GGRGRG
Subjt: RGR-EDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 2.9e-57 | 82 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRG-FDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
GRE+G G R +G GR AKA RGRG GK G GGRGRG
Subjt: GREDGPGGRPAKGMGRG-FDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 7.2e-11 | 34.06 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPPGVGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + ++ K ++ GVGR
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPPGVGR
Query: GRGRGREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGP
GRG R G+PA G GRG GGRG P
Subjt: GRGRGREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGP
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| AT1G76300.1 snRNP core protein SMD3 | 8.5e-12 | 32.54 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPPGVGRGRGR
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD + + + ++ + + GVGRGRG
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAP
AKG GRG G A P
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAP
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 5.7e-08 | 39.6 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGRGRGREDGPGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGRGRGR G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGRGRGREDGPGG
Query: R
R
Subjt: R
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 1.2e-05 | 36.04 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGR
Query: GRGREDGPGGR
GRGR G GGR
Subjt: GRGREDGPGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 6.2e-55 | 78.52 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
G +DG GA+ GRGRG GK G NR GRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAAPGGRGRGGPGGKPGPNRVGGRGRG
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