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Sed0021579 (gene) of Chayote v1 genome

Gene IDSed0021579
OrganismSechium edule (Chayote v1)
DescriptionCortactin-binding protein like
Genome locationLG14:4688311..4688886
RNA-Seq ExpressionSed0021579
SyntenySed0021579
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032619.1 uncharacterized protein E6C27_scaffold184G00030 [Cucumis melo var. makuwa]6.9e-4385.22Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
        MLR LYRRLRSR PLLV+SA+WT+LLTLTVAAASFAPELAFA+AISPSSSF+A C  + G +RVPMD PGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG

Query:  SACFVRALGLWADED
        SACFVRALGLWAD++
Subjt:  SACFVRALGLWADED

XP_004142209.1 uncharacterized protein LOC101207834 [Cucumis sativus]1.8e-4386.09Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
        MLR LYRRLRSR PLLV+SA+WT+LLTLTVAAASFAPELAFA+AISPSSSF+A C  + G +RVPMD PGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG

Query:  SACFVRALGLWADED
        SACFVRALGLWAD+D
Subjt:  SACFVRALGLWADED

XP_022963374.1 uncharacterized protein LOC111463600 [Cucurbita moschata]2.5e-4588.03Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
        MLR LYRRLRSR PLLVYSA+WTILLTLTVAAASFAPELAFA+AISPSSSF++ C  AAGF+RVPMDFPGDV+CVPD LFRKSGIDLIVPPIFAAVVVAG
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG

Query:  SACFVRALGLWADEDVL
        SACFVRALGLWAD+D L
Subjt:  SACFVRALGLWADEDVL

XP_022972738.1 uncharacterized protein LOC111471253 [Cucurbita maxima]9.6e-4587.18Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
        MLR LYRRLRSR PLLVYSA+WTILLTLTVAAASFAPELAFA+AISPSSSF++ C  AAGF+RVPM+FPGDV+CVPD LFRKSGIDLIVPPIFAAVVVAG
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG

Query:  SACFVRALGLWADEDVL
        SACFVRALGLWAD+D L
Subjt:  SACFVRALGLWADEDVL

XP_038883336.1 uncharacterized protein LOC120074319 [Benincasa hispida]4.8e-4486.32Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
        MLR LYRRL+SR PLLVYSA+WTILLTLTVAAASFAPELAFA+AISPSSSF+A C  + G +RVPMD PGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG

Query:  SACFVRALGLWADEDVL
        SACFVRALGLWAD+D L
Subjt:  SACFVRALGLWADEDVL

TrEMBL top hitse value%identityAlignment
A0A0A0L0V5 Uncharacterized protein8.8e-4486.09Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
        MLR LYRRLRSR PLLV+SA+WT+LLTLTVAAASFAPELAFA+AISPSSSF+A C  + G +RVPMD PGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG

Query:  SACFVRALGLWADED
        SACFVRALGLWAD+D
Subjt:  SACFVRALGLWADED

A0A5A7STU5 Uncharacterized protein3.3e-4385.22Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
        MLR LYRRLRSR PLLV+SA+WT+LLTLTVAAASFAPELAFA+AISPSSSF+A C  + G +RVPMD PGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG

Query:  SACFVRALGLWADED
        SACFVRALGLWAD++
Subjt:  SACFVRALGLWADED

A0A6J1CRS0 uncharacterized protein LOC1110136701.2e-4078.69Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNP-----AAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAA
        MLR L+RRLRSR PLLVYSA+WTILLTLTVA ASFAPELAFA+AISPSSSF+A C         G +RVPMD PGDVLCVPD LFRKS IDLIVPPIFAA
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNP-----AAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAA

Query:  VVVAGSACFVRALGLWADEDVL
        VVVAGSAC VRA GLWAD+DV+
Subjt:  VVVAGSACFVRALGLWADEDVL

A0A6J1HJX3 uncharacterized protein LOC1114636001.2e-4588.03Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
        MLR LYRRLRSR PLLVYSA+WTILLTLTVAAASFAPELAFA+AISPSSSF++ C  AAGF+RVPMDFPGDV+CVPD LFRKSGIDLIVPPIFAAVVVAG
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG

Query:  SACFVRALGLWADEDVL
        SACFVRALGLWAD+D L
Subjt:  SACFVRALGLWADEDVL

A0A6J1IAZ3 uncharacterized protein LOC1114712534.6e-4587.18Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
        MLR LYRRLRSR PLLVYSA+WTILLTLTVAAASFAPELAFA+AISPSSSF++ C  AAGF+RVPM+FPGDV+CVPD LFRKSGIDLIVPPIFAAVVVAG
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG

Query:  SACFVRALGLWADEDVL
        SACFVRALGLWAD+D L
Subjt:  SACFVRALGLWADEDVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07795.1 unknown protein5.1e-2044.86Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG
        ++    R +  R P++  +ATWT+LL  TVA ASFAPE+AF + +S S      C    GF+++PMDF G+ +CVP  + ++S  DL VP IFAAV+V  
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAG

Query:  SACFVRA
        SAC +R+
Subjt:  SACFVRA

AT2G28725.1 unknown protein4.9e-1540.57Show/hide
Query:  LRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS
        +  +  +  +R  +LV +ATWTILL +TVA ASFAPE+AF + +  SS          GF+R+PMD PG++L +P  + + S +D+ +P IFA V+V  S
Subjt:  LRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGS

Query:  ACFVRA
           +R+
Subjt:  ACFVRA

AT2G37530.1 unknown protein3.1e-2558.12Show/hide
Query:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSS--FSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVV
        M  SL  R   R P  VY ATWT+ LTLTVA  S APE AF +AI PSSS  FS  C   A  L VP+D P +VLC+P  LFR+S +DL+VPP+FAA+VV
Subjt:  MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSS--FSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVV

Query:  AGSACFVRALGLW-ADE
        A SA  VR +GLW ADE
Subjt:  AGSACFVRALGLW-ADE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCGATCACTCTACCGCCGTCTCCGATCGCGCTCGCCGCTCCTCGTCTACTCCGCCACCTGGACGATTCTCTTGACCCTCACCGTCGCCGCCGCCTCCTTCGCGCC
GGAGCTCGCCTTCGCCGCCGCGATCTCGCCGTCCTCCTCCTTTTCCGCCGCCTGCAACCCCGCCGCCGGCTTCCTTAGGGTTCCGATGGACTTTCCCGGCGACGTTCTCT
GCGTTCCGGATCGCCTGTTTAGGAAATCCGGAATTGATCTCATTGTTCCCCCTATTTTCGCCGCCGTCGTTGTTGCCGGGTCGGCTTGTTTTGTTCGGGCCTTGGGCCTT
TGGGCCGACGAGGACGTCCTCTAG
mRNA sequenceShow/hide mRNA sequence
GTCAAAACCTAATCCATAGTCTTTCTTCCATGTAAATAATAATAATAATAATAAATAAAATTCAGCTCATCTACAAAACCAAAACCCTAACCTCAACTTCTCAAATCCCT
TCAACAAAAATGCTCCGATCACTCTACCGCCGTCTCCGATCGCGCTCGCCGCTCCTCGTCTACTCCGCCACCTGGACGATTCTCTTGACCCTCACCGTCGCCGCCGCCTC
CTTCGCGCCGGAGCTCGCCTTCGCCGCCGCGATCTCGCCGTCCTCCTCCTTTTCCGCCGCCTGCAACCCCGCCGCCGGCTTCCTTAGGGTTCCGATGGACTTTCCCGGCG
ACGTTCTCTGCGTTCCGGATCGCCTGTTTAGGAAATCCGGAATTGATCTCATTGTTCCCCCTATTTTCGCCGCCGTCGTTGTTGCCGGGTCGGCTTGTTTTGTTCGGGCC
TTGGGCCTTTGGGCCGACGAGGACGTCCTCTAGTGGGCCTTGTTTGGCATGAAAGCCCAATCAAATGTATACCATTTTTAGAACTTGCAATCTTTATCCCTTTGCTGGTT
CTATTTTATCTATATATATATATTTC
Protein sequenceShow/hide protein sequence
MLRSLYRRLRSRSPLLVYSATWTILLTLTVAAASFAPELAFAAAISPSSSFSAACNPAAGFLRVPMDFPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGL
WADEDVL