CuGenDBv2

Gene ID	Sed0021589
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	Contig00347:102249..103868
RNA-Seq Expression	Sed0021589
Synteny	Sed0021589
Gene Ontology terms	GO:0044237 - cellular metabolic process (biological process) GO:0110165 - cellular anatomical structure (cellular component)
InterPro domains	IPR022546 - Uncharacterised protein family Ycf68

Homology

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GenBank top hits

e value

%identity

Alignment

CAA7019109.1 unnamed protein product [Microthlaspi erraticum]

1.1e-32

52.76

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Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I
        MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDPTFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I

Query:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC
        GS S  K+    NN         +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQLVELRSCNWVVAITGW+SNC
Subjt:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC

CAA7050893.1 unnamed protein product [Microthlaspi erraticum]

3.1e-32

52.26

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Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I
        MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDPTFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I

Query:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC
        GS S  K+    NN         +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQLVELRSCNWVV ITGW+SNC
Subjt:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC

CAA7061694.1 unnamed protein product [Microthlaspi erraticum]

1.1e-32

52.76

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Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I
        MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDPTFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I

Query:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC
        GS S  K+    NN         +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQLVELRSCNWVVAITGW+SNC
Subjt:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC

PPR83386.1 hypothetical protein GOBAR_AA37328 [Gossypium barbadense]

2.2e-30

44.59

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Query:  GRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEI-------------NVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQ--DQEIGSS-RKKNVWL
        G AS+    + R   HMDSSMCSSAPDPE+W   G +             NVDPTFYSLVGSGRS GDH GSSLL+NPYIPYQ  D  + S+  KK++ +
Subjt:  GRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEI-------------NVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQ--DQEIGSS-RKKNVWL

Query:  INNSLLGRRPLSHYRHTPISAMGCAMIYFTGEVSGSSPG-----W------------------PK--------------------EASDSFMQAPLGSGD
              G      +   PI  +     YFT    G   G     W                  PK                    EASDSFM APLGSGD
Subjt:  INNSLLGRRPLSHYRHTPISAMGCAMIYFTGEVSGSSPG-----W------------------PK--------------------EASDSFMQAPLGSGD

Query:  IAQLVELRSCNWVVAITGWMSNCQAVMIVSC
        IAQLVELRSCNWVVAITGW+SNC     V C
Subjt:  IAQLVELRSCNWVVAITGWMSNCQAVMIVSC

PWA37412.1 ATP synthase subunit beta, chloroplastic [Artemisia annua]

1.1e-37

47.6

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Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTR------------------------------ALSHMDSSMCSSAPDPEIWGDSGEI-------------N
        MGAGHARSRYLNRKEGDAEGRASDWSEVVTR                              ALSHMDSSMCSSAPDPE+W   G +             N
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTR------------------------------ALSHMDSSMCSSAPDPEIWGDSGEI-------------N

Query:  VDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-----IGSSRKKNVWLINNSLL---------------GRRPL--SHYRHTPISAMG------CAM
        VD TF SLVGSGRS GDH GSSLLENPYIPYQ  +      G  + +  W ++  L                G R    + Y     +A G         
Subjt:  VDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-----IGSSRKKNVWLINNSLL---------------GRRPL--SHYRHTPISAMG------CAM

Query:  IYFTGEVSG-SSPGWP-KEASDSFMQAPLGSGDIAQLVELRSCNWVVAIT
        +    ++ G ++PG   +EASDSFM APLGSG I QLVELRSCNWVVAIT
Subjt:  IYFTGEVSG-SSPGWP-KEASDSFMQAPLGSGDIAQLVELRSCNWVVAIT

TrEMBL top hits

e value

%identity

Alignment

A0A2N9GIA5 Uncharacterized protein ycf68

3.3e-32

55.09

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Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQ-----------
        MGAGHARSRYLN KEGDAEGRASDWSEVVTR +            D  I   S   NVDPTFYS+VGSGRS GDH GSSLLENPYIPYQ           
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQ-----------

Query:  -----------------------------DQEIGSSRKKNVWLINNSLLGRRPLSHYRHTPISAMGC
                                     DQEIGSS KKN WLINNSLLG RP    R  PISAMGC
Subjt:  -----------------------------DQEIGSSRKKNVWLINNSLLGRRPLSHYRHTPISAMGC

A0A2U1KL25 Uncharacterized protein ycf68

5.3e-38

47.6

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Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTR------------------------------ALSHMDSSMCSSAPDPEIWGDSGEI-------------N
        MGAGHARSRYLNRKEGDAEGRASDWSEVVTR                              ALSHMDSSMCSSAPDPE+W   G +             N
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTR------------------------------ALSHMDSSMCSSAPDPEIWGDSGEI-------------N

Query:  VDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-----IGSSRKKNVWLINNSLL---------------GRRPL--SHYRHTPISAMG------CAM
        VD TF SLVGSGRS GDH GSSLLENPYIPYQ  +      G  + +  W ++  L                G R    + Y     +A G         
Subjt:  VDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-----IGSSRKKNVWLINNSLL---------------GRRPL--SHYRHTPISAMG------CAM

Query:  IYFTGEVSG-SSPGWP-KEASDSFMQAPLGSGDIAQLVELRSCNWVVAIT
        +    ++ G ++PG   +EASDSFM APLGSG I QLVELRSCNWVVAIT
Subjt:  IYFTGEVSG-SSPGWP-KEASDSFMQAPLGSGDIAQLVELRSCNWVVAIT

A0A6D2K9C9 Uncharacterized protein ycf68

1.5e-32

52.26

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Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I
        MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDPTFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I

Query:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC
        GS S  K+    NN         +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQLVELRSCNWVV ITGW+SNC
Subjt:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC

A0A6D2KCL7 Uncharacterized protein ycf68

5.1e-33

52.76

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Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I
        MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDPTFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I

Query:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC
        GS S  K+    NN         +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQLVELRSCNWVVAITGW+SNC
Subjt:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC

A0A6D2LMW7 Uncharacterized protein ycf68

5.1e-33

52.76

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Query:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I
        MGAGHARSRYLNRKEG AEGRASDWSEVVTR +            D  I   S   NVDPTFYSLVGSGRS GDH GSSLLENPYIPYQ  +       +
Subjt:  MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQDQE-------I

Query:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC
        GS S  K+    NN         +Y  TP   +GC        ++F   ++    G    K+ + S M   L  GDIAQLVELRSCNWVVAITGW+SNC
Subjt:  GS-SRKKNVWLINNSLLGRRPLSHYRHTPISAMGC------AMIYFTGEVSGSSPG--WPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNC

SwissProt top hits

e value

%identity

Alignment

P52807 Uncharacterized protein ycf68

3.3e-05

69.44

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Query:  NVDPTFYSLVGSGRSG----DHLGSSLLENPYIPYQ
        N DPTFYS V  G  G     HLGSSLLENPYIPYQ
Subjt:  NVDPTFYSLVGSGRSG----DHLGSSLLENPYIPYQ

Q49KT9 Uncharacterized protein ycf68

3.2e-16

57.47

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Query:  RALSHMDSSMCSSAPDPEIWGDSGEI----------------------------NVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQ
        RALSHMDSSMCSSAPDPE+W   G +                            NVDPTFYSLVGSGRS GD  GSSLLENPYIPYQ
Subjt:  RALSHMDSSMCSSAPDPEIWGDSGEI----------------------------NVDPTFYSLVGSGRS-GDHLGSSLLENPYIPYQ

Q85WV9 Uncharacterized protein ycf68

1.3e-04

66.67

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Query:  NVDPTFYSLVGSGRSGD----HLGSSLLENPYIPYQ
        N DPTFYS V  G  G     H GSSLLENPYIPYQ
Subjt:  NVDPTFYSLVGSGRSGD----HLGSSLLENPYIPYQ

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGGCTCTCAGCCACATGGA
TAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATATGGGGCGATTCAGGTGAGATCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCAGGGGACC
ACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATGTTTGGCTGATAAATAACTCACTTCTTGGTCGT
CGACCCCTCAGTCACTACAGACACACCCCGATCAGTGCAATGGGATGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAAAGAAGCATC
TGACTCCTTCATGCAGGCCCCACTTGGCTCAGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACAGGTTGGATGTCTAATTGTCAGG
CAGTAATGATAGTATCTTGTACCTGA

mRNA sequence

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Protein sequence

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MGAGHARSRYLNRKEGDAEGRASDWSEVVTRALSHMDSSMCSSAPDPEIWGDSGEINVDPTFYSLVGSGRSGDHLGSSLLENPYIPYQDQEIGSSRKKNVWLINNSLLGR
RPLSHYRHTPISAMGCAMIYFTGEVSGSSPGWPKEASDSFMQAPLGSGDIAQLVELRSCNWVVAITGWMSNCQAVMIVSCT

Sed0021589 (gene) of Chayote v1 genome