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Sed0021623 (gene) of Chayote v1 genome

Gene IDSed0021623
OrganismSechium edule (Chayote v1)
DescriptionPlant UBX domain-containing protein 10
Genome locationLG01:69360659..69361297
RNA-Seq ExpressionSed0021623
SyntenySed0021623
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3434211.1 hypothetical protein FNV43_RR25314 [Rhamnella rubrinervis]1.1e-1650.81Show/hide
Query:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLI---------------LDFG---PGFVREGFMDA----------LFVYLHSLDHPD
        L + S  I +GL  +GGVLSYSLGMVGLG  L        R++ +                DFG   P FV EGFMDA          LFVYLHS DHPD
Subjt:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLI---------------LDFG---PGFVREGFMDA----------LFVYLHSLDHPD

Query:  TPLFCERTLWSESVAAFVTENFAS
        TPLFCERTL SE +AAFV ENF S
Subjt:  TPLFCERTLWSESVAAFVTENFAS

KAG4908448.1 hypothetical protein JHK86_056932 [Glycine max]2.4e-1650.43Show/hide
Query:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTPLFCER
        L + S  I +GL  +GGVLSYSLG+VGLG   A  +S        +DF           GP FV EGFMDA          LFVYLHS DHPDTP FC+R
Subjt:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTPLFCER

Query:  TLWSESVAAFVTENF
        TL SE++A FV ENF
Subjt:  TLWSESVAAFVTENF

XP_003556425.1 plant UBX domain-containing protein 10 [Glycine max]2.4e-1650.43Show/hide
Query:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTPLFCER
        L + S  I +GL  +GGVLSYSLG+VGLG   A  +S        +DF           GP FV EGFMDA          LFVYLHS DHPDTP FC+R
Subjt:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTPLFCER

Query:  TLWSESVAAFVTENF
        TL SE++A FV ENF
Subjt:  TLWSESVAAFVTENF

XP_020237227.1 plant UBX domain-containing protein 10 [Cajanus cajan]1.8e-1649.18Show/hide
Query:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLI-------LDF-----------GPGFVREGFMDA----------LFVYLHSLDHPD
        L + S  I +GL  +GGVLSYSLG+VGLG   A   S    ++ +       LDF           GP FV EGFMDA          LFVYLHS DHPD
Subjt:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLI-------LDF-----------GPGFVREGFMDA----------LFVYLHSLDHPD

Query:  TPLFCERTLWSESVAAFVTENF
        TP FC+RTL SE++AAFV ENF
Subjt:  TPLFCERTLWSESVAAFVTENF

XP_028222349.1 plant UBX domain-containing protein 10-like [Glycine soja]2.4e-1650.43Show/hide
Query:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTPLFCER
        L + S  I +GL  +GGVLSYSLG+VGLG   A  +S        +DF           GP FV EGFMDA          LFVYLHS DHPDTP FC+R
Subjt:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTPLFCER

Query:  TLWSESVAAFVTENF
        TL SE++A FV ENF
Subjt:  TLWSESVAAFVTENF

TrEMBL top hitse value%identityAlignment
A0A151U5D8 FAS-associated factor 2-B9.0e-1749.18Show/hide
Query:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLI-------LDF-----------GPGFVREGFMDA----------LFVYLHSLDHPD
        L + S  I +GL  +GGVLSYSLG+VGLG   A   S    ++ +       LDF           GP FV EGFMDA          LFVYLHS DHPD
Subjt:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLI-------LDF-----------GPGFVREGFMDA----------LFVYLHSLDHPD

Query:  TPLFCERTLWSESVAAFVTENF
        TP FC+RTL SE++AAFV ENF
Subjt:  TPLFCERTLWSESVAAFVTENF

A0A445F8K1 Plant UBX domain-containing protein 101.2e-1650.43Show/hide
Query:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTPLFCER
        L + S  I +GL  +GGVLSYSLG+VGLG   A  +S        +DF           GP FV EGFMDA          LFVYLHS DHPDTP FC+R
Subjt:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTPLFCER

Query:  TLWSESVAAFVTENF
        TL SE++A FV ENF
Subjt:  TLWSESVAAFVTENF

A0A4Y1RGR7 UBX domain-containing protein2.6e-1647.93Show/hide
Query:  RIQSKEINIGLRISGGVLSYSLGMVGLG----------LVLAGTLSRPCRMLLI---LDFG---PGFVREGFMDAL----------FVYLHSLDHPDTPL
        R+ S  I +GL  +GGVLSYSLGM+G+G          LV    ++      +     D+G   P FV EGFMDAL          FVYLHS DHPDTPL
Subjt:  RIQSKEINIGLRISGGVLSYSLGMVGLG----------LVLAGTLSRPCRMLLI---LDFG---PGFVREGFMDAL----------FVYLHSLDHPDTPL

Query:  FCERTLWSESVAAFVTENFAS
        FCERTL SE++ AF+ ENF S
Subjt:  FCERTLWSESVAAFVTENFAS

A0A5B6UTK3 Plant UBX domain-containing protein 10-like2.6e-1648.36Show/hide
Query:  LRIQSKEINIGLRISGGVLSYSLGMVGLGL-----VLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTP
        L + S  + +GL  +GGVLSYSLGM+GLG        AG +S        +DF           GP FV EGFMDA          LFVYLHS DHPD+P
Subjt:  LRIQSKEINIGLRISGGVLSYSLGMVGLGL-----VLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTP

Query:  LFCERTLWSESVAAFVTENFAS
        +FCERTL SE++AAFV ENF +
Subjt:  LFCERTLWSESVAAFVTENFAS

I1NIG8 UBX domain-containing protein1.2e-1650.43Show/hide
Query:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTPLFCER
        L + S  I +GL  +GGVLSYSLG+VGLG   A  +S        +DF           GP FV EGFMDA          LFVYLHS DHPDTP FC+R
Subjt:  LRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRMLLILDF-----------GPGFVREGFMDA----------LFVYLHSLDHPDTPLFCER

Query:  TLWSESVAAFVTENF
        TL SE++A FV ENF
Subjt:  TLWSESVAAFVTENF

SwissProt top hitse value%identityAlignment
Q9M0N1 Plant UBX domain-containing protein 101.2e-1340.48Show/hide
Query:  LRIQSKEINIGLRISGGVLSYSLGMVGLG------------LVLAGTLSRPCRMLLILD--------FGPGFVREGFMDA----------LFVYLHSLDH
        L + S  I +G+  +GGVLSYSLGM+G              + ++  +      + + D        F   FV EGFMDA          LFVYLHS DH
Subjt:  LRIQSKEINIGLRISGGVLSYSLGMVGLG------------LVLAGTLSRPCRMLLILD--------FGPGFVREGFMDA----------LFVYLHSLDH

Query:  PDTPLFCERTLWSESVAAFVTENFAS
        PDTP+FC  TL +E+V AFV ENF S
Subjt:  PDTPLFCERTLWSESVAAFVTENFAS

Arabidopsis top hitse value%identityAlignment
AT4G10790.1 UBX domain-containing protein8.3e-1540.48Show/hide
Query:  LRIQSKEINIGLRISGGVLSYSLGMVGLG------------LVLAGTLSRPCRMLLILD--------FGPGFVREGFMDA----------LFVYLHSLDH
        L + S  I +G+  +GGVLSYSLGM+G              + ++  +      + + D        F   FV EGFMDA          LFVYLHS DH
Subjt:  LRIQSKEINIGLRISGGVLSYSLGMVGLG------------LVLAGTLSRPCRMLLILD--------FGPGFVREGFMDA----------LFVYLHSLDH

Query:  PDTPLFCERTLWSESVAAFVTENFAS
        PDTP+FC  TL +E+V AFV ENF S
Subjt:  PDTPLFCERTLWSESVAAFVTENFAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATCTCTTCACCGCTCTCACTCAAAATTGGGTTCCATTCCATCCTTCGATTTCGGGAATTGGTGTTCATCGCTACTGCGAAGAAACAGGGGAATGGCGGCGCCGA
TTTGGGAAATTACGGTTCTACTTCTATTCCTTCTACTTCATCGCTGCTGCGGGAAATTAGGGTTCATCGCTACTGCGAATTCAATCGGCGATTTCTCCGAATTCAATCGA
AAGAGATCAATATTGGATTACGGATTTCTGGTGGCGTTCTTTCGTATTCTCTTGGTATGGTCGGTTTAGGTTTGGTTCTGGCCGGAACGCTGAGTCGTCCCTGTCGGATG
CTATTGATTTTGGATTTTGGGCCGGGTTTTGTAAGGGAAGGGTTTATGGACGCGTTGTTTGTTTATCTGCACTCTCTCGATCATCCTGATACGCCGTTGTTCTGTGAGAG
GACGTTGTGGTCGGAGAGTGTTGCGGCGTTTGTGACTGAGAATTTTGCTTCTAAACAGAGGATCGCTCTGCTTCCGCCTCACTGTCCAACTCGCCGACCTTTTCCGGTCA
GCCGCTCCACCCAAGGTCCTCTCTCTTTCCCTCTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATCTCTTCACCGCTCTCACTCAAAATTGGGTTCCATTCCATCCTTCGATTTCGGGAATTGGTGTTCATCGCTACTGCGAAGAAACAGGGGAATGGCGGCGCCGA
TTTGGGAAATTACGGTTCTACTTCTATTCCTTCTACTTCATCGCTGCTGCGGGAAATTAGGGTTCATCGCTACTGCGAATTCAATCGGCGATTTCTCCGAATTCAATCGA
AAGAGATCAATATTGGATTACGGATTTCTGGTGGCGTTCTTTCGTATTCTCTTGGTATGGTCGGTTTAGGTTTGGTTCTGGCCGGAACGCTGAGTCGTCCCTGTCGGATG
CTATTGATTTTGGATTTTGGGCCGGGTTTTGTAAGGGAAGGGTTTATGGACGCGTTGTTTGTTTATCTGCACTCTCTCGATCATCCTGATACGCCGTTGTTCTGTGAGAG
GACGTTGTGGTCGGAGAGTGTTGCGGCGTTTGTGACTGAGAATTTTGCTTCTAAACAGAGGATCGCTCTGCTTCCGCCTCACTGTCCAACTCGCCGACCTTTTCCGGTCA
GCCGCTCCACCCAAGGTCCTCTCTCTTTCCCTCTCAATTAA
Protein sequenceShow/hide protein sequence
MQISSPLSLKIGFHSILRFRELVFIATAKKQGNGGADLGNYGSTSIPSTSSLLREIRVHRYCEFNRRFLRIQSKEINIGLRISGGVLSYSLGMVGLGLVLAGTLSRPCRM
LLILDFGPGFVREGFMDALFVYLHSLDHPDTPLFCERTLWSESVAAFVTENFASKQRIALLPPHCPTRRPFPVSRSTQGPLSFPLN