CuGenDBv2

Gene ID	Sed0021624
Organism	Sechium edule (Chayote v1)
Description	LysM domain-containing protein
Genome location	LG06:34843458..34847508
RNA-Seq Expression	Sed0021624
Synteny	Sed0021624
Gene Ontology terms	NA
InterPro domains	IPR018392 - LysM domain IPR036779 - LysM domain superfamily IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022153133.1 uncharacterized protein LOC111020702 [Momordica charantia]

3.6e-154

79.38

Show/hide

Query:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL
        MERGRM    NGNGN D SYE SNGYHALDL D YGESTPNGRS       +S  NCIVH VSKLDTLAGVAIKYGVEVADIKKMNGLVTD QMFALKSL
Subjt:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL

Query:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSGT
        QIPLPGRHPPSP LL+G  TP QSSSE+TPS+R SSDFFESFQSLKLK S+QRVSPAMSSLQGYYGLK SDQKSR DGFEMA + K T HYL+DVP+SGT
Subjt:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSGT

Query:  TQHSD-LPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTSGSNGFSSTTGRGLLAQRPKTSSRTNLG
         Q SD L   HHRKS+SLVNGF GEKG +     AEAGD DPKWN+KLIRRRQKSVADFS SPEM+LKD+N+SGSNGFSS+ G+G LAQRPK SSRTNL 
Subjt:  TQHSD-LPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTSGSNGFSSTTGRGLLAQRPKTSSRTNLG

Query:  SDNEVGLIPIPTGLGDSFVAADGYIA-VRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD
         DNEVGLIPIP GLGDSFVAADG+ A VRKSSSTS+LPD ENG TSSIW  S W+LKPDLQAISSASRPIFDGLP PLTGRRNKAALD
Subjt:  SDNEVGLIPIPTGLGDSFVAADGYIA-VRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD

XP_022982635.1 uncharacterized protein LOC111481449 [Cucurbita maxima]

4.9e-151

78.61

Show/hide

Query:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRSS-------SPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL
        MERGRM  NGNGNG+ D SYE SNGYHALDLVD YGE+TP GRSS       S +NCIVH VSK DTLAGVAIKYGVEVADIKKMNGLVTD QMFALKSL
Subjt:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRSS-------SPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL

Query:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRID-GFEMAGYSKRTLHYLKDVPVSG
        QIPLPGRHPPSP LLEGLNT  QSSSEKTPS R SS+FFESFQSLKLK+S+QRVSPAMSSLQGYYGLKP DQKS+ID G+EMA Y K   HYL+DVPVSG
Subjt:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRID-GFEMAGYSKRTLHYLKDVPVSG

Query:  TTQHSDLPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTS-GSNGFSSTTGRGLLAQRPKTSSRTNL
        T    DL + HHRK++SLVNGF GEKG+L      EAGDGDPKWNDKLIRRR KSVADFS +PEMLLKD+N+S GSNGFSS  G+G LAQRPKTSSRTNL
Subjt:  TTQHSDLPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTS-GSNGFSSTTGRGLLAQRPKTSSRTNL

Query:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD
         SDN++GLIPIP GLGD FVAADG+   RKSSSTS+LPD+ENGITSSIW AS W+LKPDLQAIS+ SRPIFDGLP PLTGRRNKAALD
Subjt:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD

XP_023524813.1 uncharacterized protein LOC111788632 [Cucurbita pepo subsp. pepo]

8.4e-151

76.03

Show/hide

Query:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAY-GESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKS
        MERGRM    NGNG  D SYE SNG+HALDLVD Y GESTPNGRS       SSPT+CI+H VSKLDTLAGVAIKYGVEVADI+KMNGLVTD QMFALKS
Subjt:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAY-GESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKS

Query:  LQIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSG
        LQIPLPGRHPPSP LLE L+TP QSSSE+TPS R SSDFFESFQSLKLK+S+QR+S AMSSLQGYYGLKPSDQ+SRI+GF+ A YS+   H  +D+ VSG
Subjt:  LQIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSG

Query:  TTQHSDLPSRHHRKSRSLVNGFPGEKGELAE------AGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTSGSNGFSSTTGRGLLAQRPKTSSRTNL
        T+Q+ DL   HHRKSRS VNGF G+K E+A+       GDGDPKWNDKL+RRRQKSVADFS SPEMLLKD+N+SGSNGFSS+ G+GLLAQRPKTSSRTNL
Subjt:  TTQHSDLPSRHHRKSRSLVNGFPGEKGELAE------AGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTSGSNGFSSTTGRGLLAQRPKTSSRTNL

Query:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD
         SDN VGLIPIP GLGDS+VA DG+  VRKS STS+LPD ENG  SSIW AS W+LKPDLQAIS+ASRP+FDGLP PLTGRRNKAALD
Subjt:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD

XP_023528753.1 uncharacterized protein LOC111791593 [Cucurbita pepo subsp. pepo]

6.4e-151

78.61

Show/hide

Query:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRSS-------SPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL
        MERGRMNGNGNGNG+ D SYE SNGYHALDLVD YGE+TP GR S       S +NCIVH VSK DTLAGVAIKYGVEVADIKKMNGLVTD QMFALKSL
Subjt:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRSS-------SPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL

Query:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRID-GFEMAGYSKRTLHYLKDVPVSG
        QIPLPGRHPPSP LLEGLNT  QSSSEKTPS R SS+FFESFQSLKLK+S+QRVSPAMSSLQGYYGLKP DQKS+ID G+EM    K   HYL+DVPVSG
Subjt:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRID-GFEMAGYSKRTLHYLKDVPVSG

Query:  TTQHSDLPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTS-GSNGFSSTTGRGLLAQRPKTSSRTNL
        T    DL + HHRK++SLVNGF GEKG+L      EAGDGDPKWNDKLIRRR KSVADFS +PEMLLKD+N+S GSNGFSS  G+G LAQRPKTSSRTNL
Subjt:  TTQHSDLPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTS-GSNGFSSTTGRGLLAQRPKTSSRTNL

Query:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD
         SDN++GLIPIP GLGDSFVAADG+   RKSSSTS+LPD+ENGITSSIW AS W+LKPDLQAIS+ SRPIFDGLP PLTGRRNKAALD
Subjt:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD

XP_038906142.1 uncharacterized protein LOC120092022 [Benincasa hispida]

3.6e-154

79.07

Show/hide

Query:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRSS-------SPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL
        MERGRM    NGNGN D SYE SNGYH+LDLVD YG+ST + RSS       S +NCIVH VSKLDTLAGVAIKYGVEVADIKKMNGLVTD QMFALKSL
Subjt:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRSS-------SPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL

Query:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSGT
        QIPLPGRHPPSP LLEGLNTP QSSSEKTPS+  SS+FFESFQSLKLK+S QRVSPAMSSLQGYYGLKPSDQKSRIDGFEMA Y     HYL+D PVSGT
Subjt:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSGT

Query:  TQHSDLPSRHHRKSRSLVNGFPGEKGE-----LAEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTS-GSNGFSSTTGRGLLAQRPKTSSRTNLG
         QHSDL + HHRKS+SLVNGF GEKGE      AEAGDGDPKW+DKLIRRRQKSVADFS SPEMLLKD+N+S GSNGFSS+ G+GLLAQRPKTSSRTNL 
Subjt:  TQHSDLPSRHHRKSRSLVNGFPGEKGE-----LAEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTS-GSNGFSSTTGRGLLAQRPKTSSRTNLG

Query:  SDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD
        SDNEVGLIPIP GLGDSFVAADG+ A RKSSSTS+LPD+ENGITSSIW           QAIS+ASRPIFDG P PLTGRRNKAALD
Subjt:  SDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DGQ0 uncharacterized protein LOC111020702

1.8e-154

79.38

Show/hide

Query:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL
        MERGRM    NGNGN D SYE SNGYHALDL D YGESTPNGRS       +S  NCIVH VSKLDTLAGVAIKYGVEVADIKKMNGLVTD QMFALKSL
Subjt:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL

Query:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSGT
        QIPLPGRHPPSP LL+G  TP QSSSE+TPS+R SSDFFESFQSLKLK S+QRVSPAMSSLQGYYGLK SDQKSR DGFEMA + K T HYL+DVP+SGT
Subjt:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSGT

Query:  TQHSD-LPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTSGSNGFSSTTGRGLLAQRPKTSSRTNLG
         Q SD L   HHRKS+SLVNGF GEKG +     AEAGD DPKWN+KLIRRRQKSVADFS SPEM+LKD+N+SGSNGFSS+ G+G LAQRPK SSRTNL 
Subjt:  TQHSD-LPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTSGSNGFSSTTGRGLLAQRPKTSSRTNLG

Query:  SDNEVGLIPIPTGLGDSFVAADGYIA-VRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD
         DNEVGLIPIP GLGDSFVAADG+ A VRKSSSTS+LPD ENG TSSIW  S W+LKPDLQAISSASRPIFDGLP PLTGRRNKAALD
Subjt:  SDNEVGLIPIPTGLGDSFVAADGYIA-VRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD

A0A6J1F865 uncharacterized protein LOC111441757

2.6e-150

78.09

Show/hide

Query:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL
        MERGRM  NGNGNG+ D SYE SNGYHALDLVD YGE+TP GR        +S +NCIVH VSK DTLAGVAIKYGVEVADIKKMNGLVTD QMFALKSL
Subjt:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL

Query:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRID-GFEMAGYSKRTLHYLKDVPVSG
        QIPLPGRHPPSP LLEGLNT  QSSSEKTPS R SS+FFESFQSLKLK S+QRVSPAMSSLQGYYGLKP DQKS+ID G+EMA Y K   HYL+DVPVSG
Subjt:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRID-GFEMAGYSKRTLHYLKDVPVSG

Query:  TTQHSDLPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTS-GSNGFSSTTGRGLLAQRPKTSSRTNL
        T    DL + HHRK++SLVNGF GEKG+L      EAGDGDPKWNDKLIRRR KSVADFS +PEMLLKD+N+S GSNGFSS  G+G LAQRPKTSSRTNL
Subjt:  TTQHSDLPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTS-GSNGFSSTTGRGLLAQRPKTSSRTNL

Query:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD
         SDN++GLIPIP GLGDSFVAADG+   RKSSSTS+LPD+ENGI SSIW AS W+LKPDLQAIS+ SRPIFDGLP PLTGRRNKAALD
Subjt:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD

A0A6J1GAX1 uncharacterized protein LOC111452356

1.3e-146

75.26

Show/hide

Query:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAY-GESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKS
        MERGRM    NGNG  D SYE  NG+HALDLVD Y GESTPNGRS       SSPT+CI+H VSKLDTLAGVAIKYGVEVADI+KMNGLVTD QMFALKS
Subjt:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAY-GESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKS

Query:  LQIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSG
        LQIPLPGRHPPSP LLE L+TP QSSSE+TPS R SSDFFESFQSLKLK+S+QR+S AMSSLQGYYGLKPSDQ+SRI+GF+ A YS+   H  +D+ VSG
Subjt:  LQIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSG

Query:  TTQHSDLPSRHHRKSRSLVNGFPGEKGELAE------AGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTSGSNGFSSTTGRGLLAQRPKTSSRTNL
        T+Q  DL   HHRKSRS VNGF GEK E+A+       GDGDPKWNDKL+RRRQKSVADFS SPEMLLKD+N+SGSNGFSS+ G+GLLAQRPKTSSRTNL
Subjt:  TTQHSDLPSRHHRKSRSLVNGFPGEKGELAE------AGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTSGSNGFSSTTGRGLLAQRPKTSSRTNL

Query:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD
         SDN VGLIPIP GLGDS+VA DG+  VRKS STS+LPD ENG TSSIW AS W+LKPDLQAIS+AS     GLP PLTGRRNKAALD
Subjt:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD

A0A6J1J3A0 uncharacterized protein LOC111481449

2.4e-151

78.61

Show/hide

Query:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRSS-------SPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL
        MERGRM  NGNGNG+ D SYE SNGYHALDLVD YGE+TP GRSS       S +NCIVH VSK DTLAGVAIKYGVEVADIKKMNGLVTD QMFALKSL
Subjt:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRSS-------SPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSL

Query:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRID-GFEMAGYSKRTLHYLKDVPVSG
        QIPLPGRHPPSP LLEGLNT  QSSSEKTPS R SS+FFESFQSLKLK+S+QRVSPAMSSLQGYYGLKP DQKS+ID G+EMA Y K   HYL+DVPVSG
Subjt:  QIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRID-GFEMAGYSKRTLHYLKDVPVSG

Query:  TTQHSDLPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTS-GSNGFSSTTGRGLLAQRPKTSSRTNL
        T    DL + HHRK++SLVNGF GEKG+L      EAGDGDPKWNDKLIRRR KSVADFS +PEMLLKD+N+S GSNGFSS  G+G LAQRPKTSSRTNL
Subjt:  TTQHSDLPSRHHRKSRSLVNGFPGEKGEL-----AEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTS-GSNGFSSTTGRGLLAQRPKTSSRTNL

Query:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD
         SDN++GLIPIP GLGD FVAADG+   RKSSSTS+LPD+ENGITSSIW AS W+LKPDLQAIS+ SRPIFDGLP PLTGRRNKAALD
Subjt:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD

A0A6J1KCK3 uncharacterized protein LOC111493082

5.5e-148

Show/hide

Query:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAY-GESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKS
        MERGRM     GNG  D SYE SNG+HALDLVD Y GESTPNGRS       SSPT+CI+H VSKLDTLAGVAIKYGVEVADI+KMNGLVTD QMFALKS
Subjt:  MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAY-GESTPNGRS-------SSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKS

Query:  LQIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSG
        LQIPLPGRHPPSP LLE L+TP QSSSE+TPS R SSDFFESF SLKLK+S+QR+S AMSSLQGYYGLKPSDQ+SR++GF+ A YS+   H  +D+ VSG
Subjt:  LQIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSG

Query:  TTQHSDLPSRHHRKSRSLVNGFPGEKGELAE------AGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTSGSNGFSSTTGRGLLAQRPKTSSRTNL
        T+Q  DL   HHRKSRS VNGF GEK E+A+       GDGDPKWNDKL+RRRQKSVADFS SPEMLLKD+++SGSNGFSS+ G+ LLAQRPKTSSR NL
Subjt:  TTQHSDLPSRHHRKSRSLVNGFPGEKGELAE------AGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTSGSNGFSSTTGRGLLAQRPKTSSRTNL

Query:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD
         SDN VGLIPIP GLGDS+VA DG+  VRKS STS+LPD ENG TSSIW AS W+LKPDLQAIS+ASRP+FDGLP PLTGRRNKAALD
Subjt:  GSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD

SwissProt top hits

e value

%identity

Alignment

A0JNI1 LysM and putative peptidoglycan-binding domain-containing protein 1

5.5e-04

37.5

Show/hide

Query:  AYGESTPNGRSSSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSLQIPL
        +YG    +  S      + H ++  DTLAG+A+KYGV +  IK+ N L T+  +F  K+L IP+
Subjt:  AYGESTPNGRSSSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSLQIPL

Q6DCC7 LysM and putative peptidoglycan-binding domain-containing protein 4

5.5e-04

29.55

Show/hide

Query:  NGNSDDSYESSNGYHALDLVDAYGESTPNGRSSSPTNCIVHL---VSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSLQIPL
        NG ++    S   +  ++L    GE      S      ++ L   +++ D L  +A++YG +V+DIK++N L+TD  ++ALK+++IP+
Subjt:  NGNSDDSYESSNGYHALDLVDAYGESTPNGRSSSPTNCIVHL---VSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSLQIPL

Q6P606 LysM and putative peptidoglycan-binding domain-containing protein 4

1.4e-04

Show/hide

Query:  VSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSLQIPLPGRHPPSPGLLEGLNTPRQSSS
        +S  D L+ +A++YG +VADIK++N L  +  M+ALKS++IP+  +H      +  L TP+Q  S
Subjt:  VSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSLQIPLPGRHPPSPGLLEGLNTPRQSSS

Q8CC84 LysM and putative peptidoglycan-binding domain-containing protein 4

4.2e-04

35.56

Show/hide

Query:  NGNGNSDDSYESSNGYHALDLVDAYGESTPNGRSSSPTNCIVHLVSKL---DTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSLQIPL
        NG+G+S DS E  +  H + L     E   N         +V L  +L   D+L  +A++YG +VADIKK N  + +  ++ALKS++IP+
Subjt:  NGNGNSDDSYESSNGYHALDLVDAYGESTPNGRSSSPTNCIVHLVSKL---DTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSLQIPL

Q9D7V2 LysM and putative peptidoglycan-binding domain-containing protein 2

5.5e-04

39.19

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Query:  IVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSLQIPLPGRHPPSPGLLEGLNTPRQSSSEKTPS
        + H V   DTL G+A+KYGV +  IK+ N L T+  +F  K+L IP+       P L  GLN+     SE   S
Subjt:  IVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSLQIPLPGRHPPSPGLLEGLNTPRQSSSEKTPS

Arabidopsis top hits

e value

%identity

Alignment

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein

1.2e-78

47.32

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Query:  MERGRMNGNGNGNGN-SDDSYESSNGYHALDLVDAYGESTP------------------------NGRSSSPTNCIVHLVSKLDTLAGVAIKYGVEVADI
        M+R R +   NG    S+  +   NG+  LD ++   E +P                        +G +S     I H +SK DTLAGVAIKYGVEVAD+
Subjt:  MERGRMNGNGNGNGN-SDDSYESSNGYHALDLVDAYGESTP------------------------NGRSSSPTNCIVHLVSKLDTLAGVAIKYGVEVADI

Query:  KKMNGLVTDSQMFALKSLQIPLPGRHPPSPGLLEG-LNTPRQSSSEKTPSERRS-SDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDG-F
        KKMN LVTD QMFALKSLQIPLPGRHPPSP L  G LN     S  +  S   S  + F+SFQSL+LK+S+++VSPAM SLQGYYGLKP+D+     G F
Subjt:  KKMNGLVTDSQMFALKSLQIPLPGRHPPSPGLLEG-LNTPRQSSSEKTPSERRS-SDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDG-F

Query:  EMAGYSKRTLHYLKDVPVSGTTQ---HSDLPSRHHRKSRSLVNGFPGEKGELAEAGDGDPKWNDKLIRRRQKSVADF-SRSPEMLLKDENTSGSNGFSST
        EM  Y   T H++ +   +G  +    ++ P  HHRKSRSLVN    E  +  +    +P  +DK +RRRQKS ADF SR+PE++LK+EN S + GF S 
Subjt:  EMAGYSKRTLHYLKDVPVSGTTQ---HSDLPSRHHRKSRSLVNGFPGEKGELAEAGDGDPKWNDKLIRRRQKSVADF-SRSPEMLLKDENTSGSNGFSST

Query:  TGRGLLAQRPKTSSRTNLGSDNEVG-LIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEE---NGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPL
         G+G LA R K SSRTNL +++E G   P+   L D+ V +D + +VRKSSS S+L D +   N  + S+WP S W+LKPDL   ++ +  IFDGLP PL
Subjt:  TGRGLLAQRPKTSSRTNLGSDNEVG-LIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEE---NGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPL

Query:  TGRRNKAALD
        TGRRNK ALD
Subjt:  TGRRNKAALD

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein

2.8e-72

46.34

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Query:  ERGRMNGNGNGNGNSDDSYESSN----GYHALDLVDAYGESTP----------------NGRSSSPTNC---IVHLVSKLDTLAGVAIKYGVEVADIKKM
        ERGR     NG      S+E SN    GY  +D    + E +P                +   SS + C   I H VSK DTLAG+AIKYGVEVADI K+
Subjt:  ERGRMNGNGNGNGNSDDSYESSN----GYHALDLVDAYGESTP----------------NGRSSSPTNC---IVHLVSKLDTLAGVAIKYGVEVADIKKM

Query:  NGLVTDSQMFALKSLQIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRS---SDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMA
        NGLVTD QMFAL+SL+IPLPGRHPPSP L  G     +  SE+  S   +    D F+SFQSL+L  S++++SPAM+SLQGYYGLKP ++++  +GF MA
Subjt:  NGLVTDSQMFALKSLQIPLPGRHPPSPGLLEGLNTPRQSSSEKTPSERRS---SDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMA

Query:  GYSKRTL------HYLKDVPVSGTTQHSDLPSRHHRKSRSLVNGFPGEKGEL---AEAGDGDPKWNDKLIRRRQKSVADF-SRSPEMLLKDENTSGSNGF
         Y            YL   P + T      P  HHRKSRSLV+    E  +    ++AG G+    DK +RRRQKS ADF SR+PE+LLK+EN S S  F
Subjt:  GYSKRTL------HYLKDVPVSGTTQHSDLPSRHHRKSRSLVNGFPGEKGEL---AEAGDGDPKWNDKLIRRRQKSVADF-SRSPEMLLKDENTSGSNGF

Query:  SSTTGRGLLAQRPKTSSRTNLGSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEE-NGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPL
        S+  G+  LA R K SSR NL ++    L  IP  L D+ V  D + +VRKS S S+L +   N   SS+WP S W LKP+L    + +  IFDGLP PL
Subjt:  SSTTGRGLLAQRPKTSSRTNLGSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEE-NGITSSIWPASMWNLKPDLQAISSASRPIFDGLPNPL

Query:  TGRRNKAALD
        TGRRNK A+D
Subjt:  TGRRNKAALD

Sequences

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CDS sequence

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ATGGAAAGGGGGCGGATGAATGGAAATGGAAATGGAAATGGAAATAGTGATGATAGTTATGAGAGCAGCAATGGGTATCATGCGTTAGATCTGGTGGATGCGTATGGAGA
AAGCACGCCGAATGGAAGAAGTTCATCTCCTACTAATTGCATCGTTCATCTGGTTTCTAAATTAGATACTCTTGCTGGAGTTGCAATCAAATACGGTGTCGAGGTTGCAG
ATATAAAGAAGATGAATGGGCTAGTTACAGACTCTCAAATGTTTGCCCTTAAATCTCTCCAGATTCCTCTTCCTGGGAGGCATCCTCCATCCCCTGGTTTATTGGAAGGC
CTAAACACTCCGCGACAAAGCAGCTCAGAAAAGACTCCAAGTGAACGTCGATCGTCGGATTTCTTTGAATCGTTCCAGTCCCTCAAACTGAAGGCTTCCAAACAAAGAGT
CTCCCCAGCCATGAGCTCTTTACAAGGTTACTATGGCCTCAAACCATCTGATCAGAAGAGCAGAATTGACGGTTTTGAAATGGCAGGCTATAGCAAACGAACCTTGCATT
ATCTAAAAGATGTGCCTGTTTCTGGGACCACACAGCATTCGGATTTGCCATCGCGTCACCATCGAAAATCCAGGAGTTTAGTGAATGGCTTTCCAGGTGAGAAAGGAGAA
TTGGCTGAAGCCGGGGATGGAGATCCGAAATGGAATGATAAATTGATAAGAAGGCGCCAGAAATCTGTAGCTGACTTTTCCCGTTCCCCTGAAATGCTCTTGAAAGATGA
AAACACCAGCGGAAGTAATGGGTTCTCATCCACTACTGGAAGGGGCTTGTTGGCTCAAAGACCCAAAACCTCCAGTAGAACGAATTTGGGAAGCGATAACGAGGTCGGGT
TGATTCCAATTCCAACCGGTTTGGGGGACTCATTTGTAGCCGCTGACGGGTACATTGCAGTCAGGAAGTCATCGAGCACATCGAATTTGCCAGATGAGGAAAATGGCATC
ACATCATCGATCTGGCCCGCTTCAATGTGGAATTTGAAACCGGATTTACAGGCGATTTCGTCTGCCTCCAGACCAATATTCGATGGATTGCCAAACCCTTTGACGGGTCG
AAGAAACAAGGCAGCACTTGATTAA

mRNA sequence

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GTAGGGGTTTGTGAAGAAACGAAGAAGAAGAAGAAATGAGCGAAAATCTTTCGTTCTTTCCTGAAAATTTTGGATTGTGAAATATTTTGATTTCGAAAGTCGGAGAAGTT
CGTTTACGATTCTGTGATTTAGGGATATTTTTCTTGTTTCTGTTCATCCCGATTCTCGCAGATTTTTGTAAAGCGAATTTTCGGCGGTTTTGATTCGCGGAGTTGTTGTT
TTTTATGAAATTGGGCTGTGTTTGGATTGAATTAGAATCTTTGTTCATTCGATGATGGTTTTGATTTCTTGACGGAAGCTTGTTTGGATGGTGGAATTGAGATGGAAAGG
GGGCGGATGAATGGAAATGGAAATGGAAATGGAAATAGTGATGATAGTTATGAGAGCAGCAATGGGTATCATGCGTTAGATCTGGTGGATGCGTATGGAGAAAGCACGCC
GAATGGAAGAAGTTCATCTCCTACTAATTGCATCGTTCATCTGGTTTCTAAATTAGATACTCTTGCTGGAGTTGCAATCAAATACGGTGTCGAGGTTGCAGATATAAAGA
AGATGAATGGGCTAGTTACAGACTCTCAAATGTTTGCCCTTAAATCTCTCCAGATTCCTCTTCCTGGGAGGCATCCTCCATCCCCTGGTTTATTGGAAGGCCTAAACACT
CCGCGACAAAGCAGCTCAGAAAAGACTCCAAGTGAACGTCGATCGTCGGATTTCTTTGAATCGTTCCAGTCCCTCAAACTGAAGGCTTCCAAACAAAGAGTCTCCCCAGC
CATGAGCTCTTTACAAGGTTACTATGGCCTCAAACCATCTGATCAGAAGAGCAGAATTGACGGTTTTGAAATGGCAGGCTATAGCAAACGAACCTTGCATTATCTAAAAG
ATGTGCCTGTTTCTGGGACCACACAGCATTCGGATTTGCCATCGCGTCACCATCGAAAATCCAGGAGTTTAGTGAATGGCTTTCCAGGTGAGAAAGGAGAATTGGCTGAA
GCCGGGGATGGAGATCCGAAATGGAATGATAAATTGATAAGAAGGCGCCAGAAATCTGTAGCTGACTTTTCCCGTTCCCCTGAAATGCTCTTGAAAGATGAAAACACCAG
CGGAAGTAATGGGTTCTCATCCACTACTGGAAGGGGCTTGTTGGCTCAAAGACCCAAAACCTCCAGTAGAACGAATTTGGGAAGCGATAACGAGGTCGGGTTGATTCCAA
TTCCAACCGGTTTGGGGGACTCATTTGTAGCCGCTGACGGGTACATTGCAGTCAGGAAGTCATCGAGCACATCGAATTTGCCAGATGAGGAAAATGGCATCACATCATCG
ATCTGGCCCGCTTCAATGTGGAATTTGAAACCGGATTTACAGGCGATTTCGTCTGCCTCCAGACCAATATTCGATGGATTGCCAAACCCTTTGACGGGTCGAAGAAACAA
GGCAGCACTTGATTAAAATAAAAGGAAAAGGAGTGGTAAATTTTCTACCTACTTTTGCTCCATAATTTAACAGGATTTTAGTGCCATCTTTTCTTTTATAGTTCTTTAGA
AGAAATTAAAGAGGTCAGATAGCACAGGTGTCCATTTACTCTTTTTTAATGAGATTGGTTTCTTAAAGATGAGGATGAGATTGAACACTGAAATTCATGTAATTCGCACG
TGCAATCACGTGATCACAACAAGTACTTGAGTGTTGTGTTTGTACATTGGTTTACGTAGGTCAACTCAGTAGAATTTTTTTGAAGGTGACGTTCAATTTCCATCTACTTT
TCTTTTCATTTCATTTTGTTGAATATTTTAATACAGCC

Protein sequence

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MERGRMNGNGNGNGNSDDSYESSNGYHALDLVDAYGESTPNGRSSSPTNCIVHLVSKLDTLAGVAIKYGVEVADIKKMNGLVTDSQMFALKSLQIPLPGRHPPSPGLLEG
LNTPRQSSSEKTPSERRSSDFFESFQSLKLKASKQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAGYSKRTLHYLKDVPVSGTTQHSDLPSRHHRKSRSLVNGFPGEKGE
LAEAGDGDPKWNDKLIRRRQKSVADFSRSPEMLLKDENTSGSNGFSSTTGRGLLAQRPKTSSRTNLGSDNEVGLIPIPTGLGDSFVAADGYIAVRKSSSTSNLPDEENGI
TSSIWPASMWNLKPDLQAISSASRPIFDGLPNPLTGRRNKAALD

Sed0021624 (gene) of Chayote v1 genome