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Sed0021644 (gene) of Chayote v1 genome

Gene IDSed0021644
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:42477729..42478318
RNA-Seq ExpressionSed0021644
SyntenySed0021644
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043852.1 hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa]1.1e-1042.72Show/hide
Query:  MMFTSSFARFSPTEE---NENENNQLVSDGSKDRVTDDDNDTLEEV---------VLPRSPAAAPPPPRPK-CFGDFCGGGLLPCTEPCFCNIPMGAQRG
        M+FT   A  +  EE    ENEN + +        +DD N+  E V         ++  +P   P PP P  C+G+FCGGGLLPC EPCFC+IP+GA RG
Subjt:  MMFTSSFARFSPTEE---NENENNQLVSDGSKDRVTDDDNDTLEEV---------VLPRSPAAAPPPPRPK-CFGDFCGGGLLPCTEPCFCNIPMGAQRG

Query:  YCV
         CV
Subjt:  YCV

KAG6580718.1 hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sororia]7.9e-2255.96Show/hide
Query:  MEGKKLALVMMVAMMMFTSSFARFSPTEENENENNQLVSDGSKDRVTDDDNDTLEEVVLPRSPAAAP---PPPRPKCFGDFCGGGLLPCTEPCFCNIPMG
        MEGKK+ALV+++  M FTS+ AR           NQL++DGS DR   D+ D L ++    +P AAP   P PRP CFG+FCGGGLLPC EPCFC IPMG
Subjt:  MEGKKLALVMMVAMMMFTSSFARFSPTEENENENNQLVSDGSKDRVTDDDNDTLEEVVLPRSPAAAP---PPPRPKCFGDFCGGGLLPCTEPCFCNIPMG

Query:  AQRGYCVDF
        +QRG CVDF
Subjt:  AQRGYCVDF

KGN59161.1 hypothetical protein Csa_002402 [Cucumis sativus]1.5e-1751.35Show/hide
Query:  MEGKKLALVMMVAMMMFTSSFARFS------PTEENEN-ENNQLVSDGSKDRVTDDDNDTLEEVVLPRSPAAAPPPPRPKCFGDFCGGGLLPCTEPCFCN
        MEGKKLALV+++ M +FT S A+ +        E+NEN E  QL SDGS D+     +D   +++         PPP P CFG+FCGGGLL C EPCFCN
Subjt:  MEGKKLALVMMVAMMMFTSSFARFS------PTEENEN-ENNQLVSDGSKDRVTDDDNDTLEEVVLPRSPAAAPPPPRPKCFGDFCGGGLLPCTEPCFCN

Query:  IPMGAQRGYCV
        IPMGA RG CV
Subjt:  IPMGAQRGYCV

TYK30388.1 hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa]2.5e-1545.3Show/hide
Query:  MEGKKLALVMMVAMMMFTSSFARFSPTEE---NENENNQLVSDGSKDRVTDDDNDTLEEV---------VLPRSPAAAPPPPRPK-CFGDFCGGGLLPCT
        MEGKKLALV+++  M+FT   A  +  EE    ENEN + +        +DD N+  E V         ++  +P   P PP P  C+G+FCGGGLLPC 
Subjt:  MEGKKLALVMMVAMMMFTSSFARFSPTEE---NENENNQLVSDGSKDRVTDDDNDTLEEV---------VLPRSPAAAPPPPRPK-CFGDFCGGGLLPCT

Query:  EPCFCNIPMGAQRGYCV
        EPCFC+IP+GA RG CV
Subjt:  EPCFCNIPMGAQRGYCV

TrEMBL top hitse value%identityAlignment
A0A0A0LGQ3 Uncharacterized protein7.5e-1851.35Show/hide
Query:  MEGKKLALVMMVAMMMFTSSFARFS------PTEENEN-ENNQLVSDGSKDRVTDDDNDTLEEVVLPRSPAAAPPPPRPKCFGDFCGGGLLPCTEPCFCN
        MEGKKLALV+++ M +FT S A+ +        E+NEN E  QL SDGS D+     +D   +++         PPP P CFG+FCGGGLL C EPCFCN
Subjt:  MEGKKLALVMMVAMMMFTSSFARFS------PTEENEN-ENNQLVSDGSKDRVTDDDNDTLEEVVLPRSPAAAPPPPRPKCFGDFCGGGLLPCTEPCFCN

Query:  IPMGAQRGYCV
        IPMGA RG CV
Subjt:  IPMGAQRGYCV

A0A5A7TKL8 Uncharacterized protein5.2e-1142.72Show/hide
Query:  MMFTSSFARFSPTEE---NENENNQLVSDGSKDRVTDDDNDTLEEV---------VLPRSPAAAPPPPRPK-CFGDFCGGGLLPCTEPCFCNIPMGAQRG
        M+FT   A  +  EE    ENEN + +        +DD N+  E V         ++  +P   P PP P  C+G+FCGGGLLPC EPCFC+IP+GA RG
Subjt:  MMFTSSFARFSPTEE---NENENNQLVSDGSKDRVTDDDNDTLEEV---------VLPRSPAAAPPPPRPK-CFGDFCGGGLLPCTEPCFCNIPMGAQRG

Query:  YCV
         CV
Subjt:  YCV

A0A5D3E3L2 Uncharacterized protein1.2e-1545.3Show/hide
Query:  MEGKKLALVMMVAMMMFTSSFARFSPTEE---NENENNQLVSDGSKDRVTDDDNDTLEEV---------VLPRSPAAAPPPPRPK-CFGDFCGGGLLPCT
        MEGKKLALV+++  M+FT   A  +  EE    ENEN + +        +DD N+  E V         ++  +P   P PP P  C+G+FCGGGLLPC 
Subjt:  MEGKKLALVMMVAMMMFTSSFARFSPTEE---NENENNQLVSDGSKDRVTDDDNDTLEEV---------VLPRSPAAAPPPPRPK-CFGDFCGGGLLPCT

Query:  EPCFCNIPMGAQRGYCV
        EPCFC+IP+GA RG CV
Subjt:  EPCFCNIPMGAQRGYCV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAAAGAAGTTGGCTTTAGTGATGATGGTGGCGATGATGATGTTTACGAGTTCGTTTGCACGATTTTCCCCGACCGAAGAGAATGAAAATGAGAATAATCAACT
CGTTTCGGATGGTAGCAAAGATCGAGTTACGGACGACGACAACGATACTTTGGAAGAGGTAGTGTTGCCGCGGTCGCCTGCAGCTGCACCACCTCCACCACGCCCCAAAT
GTTTTGGAGATTTCTGTGGTGGTGGACTTCTCCCCTGTACTGAACCCTGCTTTTGCAACATACCAATGGGTGCACAAAGGGGATATTGTGTTGACTTTTAA
mRNA sequenceShow/hide mRNA sequence
CAAAAAAGGAAAAAAAGACTTGAAAGAAGCAAGAGCGAGATGGAAGGAAAGAAGTTGGCTTTAGTGATGATGGTGGCGATGATGATGTTTACGAGTTCGTTTGCACGATT
TTCCCCGACCGAAGAGAATGAAAATGAGAATAATCAACTCGTTTCGGATGGTAGCAAAGATCGAGTTACGGACGACGACAACGATACTTTGGAAGAGGTAGTGTTGCCGC
GGTCGCCTGCAGCTGCACCACCTCCACCACGCCCCAAATGTTTTGGAGATTTCTGTGGTGGTGGACTTCTCCCCTGTACTGAACCCTGCTTTTGCAACATACCAATGGGT
GCACAAAGGGGATATTGTGTTGACTTTTAATATCCTTTCATCCTTTAATTCCAAGTTGCATTATGTAAGCCTTAAGCTATTTGCTTTCATGTGATAATTGTCAGCAAAAG
AATAAATAAAGTGGAAGGTGAAGAAATAACAACTTATCTTCTTTTTCTTTTAGTTACATATGTTTTCGTTTGATCTCTATATAAAAAGTTTGTGCATATTTCTTTTCTGA
TATGCTCTTTGAGTTATTTAAAGAGAAGGTTTTGATCTAA
Protein sequenceShow/hide protein sequence
MEGKKLALVMMVAMMMFTSSFARFSPTEENENENNQLVSDGSKDRVTDDDNDTLEEVVLPRSPAAAPPPPRPKCFGDFCGGGLLPCTEPCFCNIPMGAQRGYCVDF