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Sed0021652 (gene) of Chayote v1 genome

Gene IDSed0021652
OrganismSechium edule (Chayote v1)
DescriptionProtein CLAVATA 3
Genome locationLG11:27677254..27681318
RNA-Seq ExpressionSed0021652
SyntenySed0021652
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054350.1 protein CLAVATA 3 [Cucumis melo var. makuwa]3.5e-1170.37Show/hide
Query:  SRKKLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP
        SRK + EMKK+++    GGK  RT AEW+QLRRVPSGPDPLHH+GGSPKKP+TP
Subjt:  SRKKLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP

KAE8652825.1 hypothetical protein Csa_022700, partial [Cucumis sativus]2.8e-1664.56Show/hide
Query:  NYCSWRVGRRLCVSDKALVGRT-SRSRKKLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP
        NYC WRVGR   VS K  V R    SRK L EMKK+++    GGK   T AEW+QLRRVPSGPDPLHH+GGSPKKP+TP
Subjt:  NYCSWRVGRRLCVSDKALVGRT-SRSRKKLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP

KAG6583691.1 hypothetical protein SDJN03_19623, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1260Show/hide
Query:  RRLCVSDKALVGRTSRSRKKLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP
        RR  V D   + R  ++RK L EM K++  E+ GG+ RR + EWDQLRRVPSGPDPLHH+GGSPKKP+TP
Subjt:  RRLCVSDKALVGRTSRSRKKLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP

XP_015873114.2 protein CLAVATA 3 [Ziziphus jujuba]1.3e-0548Show/hide
Query:  RRLCVSDKALVGRTSRSRKKLEEMKKK----IKSEIGGGKGRRTAAEWD-QLRRVPSGPDPLHHSGGSPKKPKTP
        R  C++  A V   +++RK L  +K+K     KS   G  G      WD QLR+VPSGPDPLHH+G SPKKP+TP
Subjt:  RRLCVSDKALVGRTSRSRKKLEEMKKK----IKSEIGGGKGRRTAAEWD-QLRRVPSGPDPLHHSGGSPKKPKTP

XP_038877536.1 protein CLAVATA 3 [Benincasa hispida]2.6e-1460Show/hide
Query:  YCSWRVG--RRLCVSDKALVGRTSR-SRKKLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP
        YC WRV   R  CVS K  V R  + SRK L+EMKK+++  + G K    A EW+QLRRVPSGPDPLHH+GGSPKKP+TP
Subjt:  YCSWRVG--RRLCVSDKALVGRTSR-SRKKLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP

TrEMBL top hitse value%identityAlignment
A0A1U8Q0C1 uncharacterized protein LOC1091143291.2e-0446.75Show/hide
Query:  SWRVGRRLCVSDKALVGRTSRSRKKLEEMKKKIKSEIGGGKGRR--TAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP
        +W  G R       L    ++SRK L   ++  KS       RR      WD LRRVPSGPDPLHH+GGSPKKP+TP
Subjt:  SWRVGRRLCVSDKALVGRTSRSRKKLEEMKKKIKSEIGGGKGRR--TAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP

A0A5A7UGG1 Protein CLAVATA 31.7e-1170.37Show/hide
Query:  SRKKLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP
        SRK + EMKK+++    GGK  RT AEW+QLRRVPSGPDPLHH+GGSPKKP+TP
Subjt:  SRKKLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP

A0A660KSX1 Uncharacterized protein1.4e-0547.14Show/hide
Query:  CVSDKALVGRTSRSRK---KLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP
        C   KA     + +RK    L+EMK+ +K    G    R    +  LR+VPSGPDPLHH+GGSPKKP+TP
Subjt:  CVSDKALVGRTSRSRK---KLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP

A0A6A1WP99 Uncharacterized protein4.1e-0546.58Show/hide
Query:  CVSDKALVGRTSRSRKKLEEMKKKIKSEIGGGKGRRTAAE------WDQLRRVPSGPDPLHHSGGSPKKPKTP
        C   +A V   +++RK L  +K K +S   G +G  T++       W +LR VPSGPDPLHH+GGSPKKP+TP
Subjt:  CVSDKALVGRTSRSRKKLEEMKKKIKSEIGGGKGRRTAAE------WDQLRRVPSGPDPLHHSGGSPKKPKTP

A0A6P3ZEB5 protein CLAVATA 36.3e-0648Show/hide
Query:  RRLCVSDKALVGRTSRSRKKLEEMKKK----IKSEIGGGKGRRTAAEWD-QLRRVPSGPDPLHHSGGSPKKPKTP
        R  C++  A V   +++RK L  +K+K     KS   G  G      WD QLR+VPSGPDPLHH+G SPKKP+TP
Subjt:  RRLCVSDKALVGRTSRSRKKLEEMKKK----IKSEIGGGKGRRTAAEWD-QLRRVPSGPDPLHHSGGSPKKPKTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGATGCTGCAGGCTCATCTGCTGCATGAACAGATTAAAAGCAGAGAAAATGAAAAAGGAAAAAGAAATTATTGCAGCTGGAGAGTTGGACGTCGTCTTTGTGT
TTCCGATAAGGCGCTGGTCGGTCGAACTTCTCGGAGCAGGAAGAAGCTTGAAGAAATGAAGAAAAAGATAAAATCGGAAATTGGCGGCGGAAAAGGGCGGCGGACGGCGG
CGGAGTGGGATCAGTTGCGGCGGGTCCCGTCGGGACCTGACCCATTACACCACAGTGGAGGAAGCCCTAAAAAGCCTAAAACTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGATGCTGCAGGCTCATCTGCTGCATGAACAGATTAAAAGCAGAGAAAATGAAAAAGGAAAAAGAAATTATTGCAGCTGGAGAGTTGGACGTCGTCTTTGTGT
TTCCGATAAGGCGCTGGTCGGTCGAACTTCTCGGAGCAGGAAGAAGCTTGAAGAAATGAAGAAAAAGATAAAATCGGAAATTGGCGGCGGAAAAGGGCGGCGGACGGCGG
CGGAGTGGGATCAGTTGCGGCGGGTCCCGTCGGGACCTGACCCATTACACCACAGTGGAGGAAGCCCTAAAAAGCCTAAAACTCCTTGA
Protein sequenceShow/hide protein sequence
MGRMLQAHLLHEQIKSRENEKGKRNYCSWRVGRRLCVSDKALVGRTSRSRKKLEEMKKKIKSEIGGGKGRRTAAEWDQLRRVPSGPDPLHHSGGSPKKPKTP