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Sed0021654 (gene) of Chayote v1 genome

Gene IDSed0021654
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:49211541..49212466
RNA-Seq ExpressionSed0021654
SyntenySed0021654
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI26243.3 unnamed protein product, partial [Vitis vinifera]2.3e-2185.25Show/hide
Query:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK
        MGWLQSLFSPL KLWFRLHS+ +K RGIYILYEDVKSCP EDVHVLWSILVESH+P PP K
Subjt:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK

KAG6597448.1 hypothetical protein SDJN03_10628, partial [Cucurbita argyrosperma subsp. sororia]6.6e-2192.86Show/hide
Query:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTP
        MGWLQSLFSPL KLWFRLHSS +KRRGIYILYEDVKSCP EDVHVLWSILVESHTP
Subjt:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTP

KGN56989.1 hypothetical protein Csa_010650 [Cucumis sativus]3.7e-2493.44Show/hide
Query:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK
        MGWLQSLFSPL KLWFRLHSS KKRRGIYILYEDVKSCP EDVHVLWSILVESHTPLPPK+
Subjt:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK

ONI26253.1 hypothetical protein PRUPE_1G012900 [Prunus persica]8.6e-2185.25Show/hide
Query:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK
        MGWL SLFSPL KLWFRLHS+ KKRRGIYILYEDVKSCP EDVHVLWSILVE+HTP  P K
Subjt:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK

PHT38775.1 hypothetical protein CQW23_22348 [Capsicum baccatum]6.6e-2187.1Show/hide
Query:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHT-PLPPKK
        MGWLQSLFSPL KLWFRLHS+ KKRRGIYILYEDVKSCP EDV VLWSILVESH  PLPP+K
Subjt:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHT-PLPPKK

TrEMBL top hitse value%identityAlignment
A0A0A0L7K5 Uncharacterized protein1.8e-2493.44Show/hide
Query:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK
        MGWLQSLFSPL KLWFRLHSS KKRRGIYILYEDVKSCP EDVHVLWSILVESHTPLPPK+
Subjt:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK

A0A2G2W0L8 Uncharacterized protein3.2e-2187.1Show/hide
Query:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHT-PLPPKK
        MGWLQSLFSPL KLWFRLHS+ KKRRGIYILYEDVKSCP EDV VLWSILVESH  PLPP+K
Subjt:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHT-PLPPKK

A0A2G2ZVG2 Uncharacterized protein3.2e-2187.1Show/hide
Query:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHT-PLPPKK
        MGWLQSLFSPL KLWFRLHS+ KKRRGIYILYEDVKSCP EDV VLWSILVESH  PLPP+K
Subjt:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHT-PLPPKK

D7T6X2 Uncharacterized protein1.1e-2185.25Show/hide
Query:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK
        MGWLQSLFSPL KLWFRLHS+ +K RGIYILYEDVKSCP EDVHVLWSILVESH+P PP K
Subjt:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK

M5XVP0 Uncharacterized protein4.2e-2185.25Show/hide
Query:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK
        MGWL SLFSPL KLWFRLHS+ KKRRGIYILYEDVKSCP EDVHVLWSILVE+HTP  P K
Subjt:  MGWLQSLFSPLNKLWFRLHSS-KKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTGAATAAGCTCTGGTTTCGCCTCCATTCATCGAAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTGAAATCATG
TCCCAGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCAAAAAAATATTGA
mRNA sequenceShow/hide mRNA sequence
CTTTTTGAAAAGGGATTTCATGGAAGAGTGTGAAGCACAGCAGATTGGTGGTGGTGAAAAAGGCTTCTTCTACTACAAGGAAAAAAGTGCTTAAAAAGACATTTTACCAA
TATGAGAAATGCATGATTTCTTGAATAAATGAATGTGAGAAAAAAAATGCCTCAAAATCCCTCTTGTCTAAGCTAAGAACACACCAAATGGGGTGGCTCCAATCCCTCTT
CTCCCCATTGAATAAGCTCTGGTTTCGCCTCCATTCATCGAAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTGAAATCATGTCCCAGTGAAGATGTGCATGTGC
TTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCAAAAAAATATTGAAGGTTTTTCCATCACAATGTACATAAAATATTTATAATGCTTTCCATACAGAAGAAC
AAAAAAAGATTGGTTTTCTTTCCCCATTTTCATCTCTTTTTTCTCTCTAATTATTTTTGTATAACTTCTCATAGTTGCTTTGTCTATTTCAGC
Protein sequenceShow/hide protein sequence
MGWLQSLFSPLNKLWFRLHSSKKRRGIYILYEDVKSCPSEDVHVLWSILVESHTPLPPKKY