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Sed0021655 (gene) of Chayote v1 genome

Gene IDSed0021655
OrganismSechium edule (Chayote v1)
DescriptionACT11D09.5
Genome locationLG01:2825632..2826738
RNA-Seq ExpressionSed0021655
SyntenySed0021655
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0035196 - production of miRNAs involved in gene silencing by miRNA (biological process)
GO:1903730 - regulation of phosphatidate phosphatase activity (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR039292 - Protein SICKLE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022947202.1 protein SICKLE isoform X1 [Cucurbita moschata]1.2e-0652.5Show/hide
Query:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVNDAP
        EQFYN S+  L+ P +       R +  L  +  P+   + KF TKKARVS++SSGRS SQPSLAEYLAASFNE  N+ P
Subjt:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVNDAP
XP_022947209.1 protein SICKLE isoform X2 [Cucurbita moschata]1.2e-0652.5Show/hide
Query:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVNDAP
        EQFYN S+  L+ P +       R +  L  +  P+   + KF TKKARVS++SSGRS SQPSLAEYLAASFNE  N+ P
Subjt:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVNDAP
XP_022947209.1 protein SICKLE isoform X2 [Cucurbita moschata]5.8e-3070.09Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
        MEESEKRRERLRAMRMEA+QADVA YVETSLPN LSNPLVESS  M G+SEPCTAPRFDYYTNPM AFS++K++GNQ VSH       N SP  YVP   
Subjt:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF

Query:  MQKEQFY
              Y
Subjt:  MQKEQFY
XP_023007497.1 protein SICKLE isoform X1 [Cucurbita maxima]2.0e-3075Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
        MEESEKRRERLRAMRMEA+QADVA YVETSLPN LSNPLVESS  M G+SEPCTAPRFDYYTNPM AFS++K++GNQ VSH       N SP  YVP +F
Subjt:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
XP_023007497.1 protein SICKLE isoform X1 [Cucurbita maxima]1.1e-0450Show/hide
Query:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVND
        EQFY+ S+  L+ P +       R +  L  +  P+   + KF TKKARV ++SSGRS SQPSLAEYLAASFNE  N+
Subjt:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVND
XP_023007497.1 protein SICKLE isoform X1 [Cucurbita maxima]2.0e-3075Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
        MEESEKRRERLRAMRMEA+QADVA YVETSLPN LSNPLVESS  M G+SEPCTAPRFDYYTNPM AFS++K++GNQ VSH       N SP  YVP +F
Subjt:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
XP_023007500.1 protein SICKLE isoform X2 [Cucurbita maxima]1.1e-0450Show/hide
Query:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVND
        EQFY+ S+  L+ P +       R +  L  +  P+   + KF TKKARV ++SSGRS SQPSLAEYLAASFNE  N+
Subjt:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVND
XP_023007500.1 protein SICKLE isoform X2 [Cucurbita maxima]2.6e-3074Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
        MEESEKRRERLRAMRMEA+QADVA Y+ETSLPN LSNPLVESS  M G+SEPCTAPRFDYYTNPM AFS++K++GNQ VSH       N SP  YVP +F
Subjt:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
XP_023533680.1 protein SICKLE [Cucurbita pepo subsp. pepo]5.8e-0678.05Show/hide
Query:  LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVNDAP
        + KF TKKARVS++SSGRSSSQPSLAEYLAASFNE  N+ P
Subjt:  LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVNDAP
XP_023533680.1 protein SICKLE [Cucurbita pepo subsp. pepo]7.5e-3069.16Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
        MEESEKRRERLRAMRMEA+QADVA Y+ETSLPN LSNPLVESS  M G+SEPCTAPRFDYYTNPM AFS++K++GNQ VSH       N SP  YVP   
Subjt:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF

Query:  MQKEQFY
              Y
Subjt:  MQKEQFY
TrEMBL top hitse value%identityAlignment
A0A6J1G5T4 protein SICKLE isoform X15.7e-0752.5Show/hide
Query:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVNDAP
        EQFYN S+  L+ P +       R +  L  +  P+   + KF TKKARVS++SSGRS SQPSLAEYLAASFNE  N+ P
Subjt:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVNDAP
A0A6J1G5T4 protein SICKLE isoform X15.3e-2938.83Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKG---NQLVS-------HNHSPATYVP
        MEESEKRRERLRAMRMEAAQADVA YVETSLPN LSNPLVESS TM G+  PCTAPRFDYYTNPM AFS +K+KG   NQ VS       HN S  TY P
Subjt:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKG---NQLVS-------HNHSPATYVP

Query:  ------------------------------------------------------------------------------------GSFMQ-----------
                                                                                            GSF             
Subjt:  ------------------------------------------------------------------------------------GSFMQ-----------

Query:  -------------------------KEQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSS-QPSLAEYLAASFN
                                  EQFYN S+  L+ P +         +  L  +  P+   + KF TKKARVS+SSS RSSS QPSLAEYLAASF 
Subjt:  -------------------------KEQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSS-QPSLAEYLAASFN

Query:  ETVNDAPNA
        E + +APNA
Subjt:  ETVNDAPNA
A0A6J1G649 protein SICKLE isoform X25.7e-0752.5Show/hide
Query:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVNDAP
        EQFYN S+  L+ P +       R +  L  +  P+   + KF TKKARVS++SSGRS SQPSLAEYLAASFNE  N+ P
Subjt:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVNDAP
A0A6J1G649 protein SICKLE isoform X23.7e-3069.16Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
        MEESEKRRERLRAMRMEA+QADVA Y+ETSLPN LSNPLVESS  M G+SEPCTAPRFDYYTNPM AFS++K++GNQ VSH       N SP  YVP   
Subjt:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF

Query:  MQKEQFY
              Y
Subjt:  MQKEQFY
A0A6J1KYW0 protein SICKLE isoform X19.6e-3175Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
        MEESEKRRERLRAMRMEA+QADVA YVETSLPN LSNPLVESS  M G+SEPCTAPRFDYYTNPM AFS++K++GNQ VSH       N SP  YVP +F
Subjt:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
A0A6J1KYW0 protein SICKLE isoform X15.3e-0550Show/hide
Query:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVND
        EQFY+ S+  L+ P +       R +  L  +  P+   + KF TKKARV ++SSGRS SQPSLAEYLAASFNE  N+
Subjt:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVND
A0A6J1KYW0 protein SICKLE isoform X19.6e-3175Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
        MEESEKRRERLRAMRMEA+QADVA YVETSLPN LSNPLVESS  M G+SEPCTAPRFDYYTNPM AFS++K++GNQ VSH       N SP  YVP +F
Subjt:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
A0A6J1L0Q3 protein SICKLE isoform X25.3e-0550Show/hide
Query:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVND
        EQFY+ S+  L+ P +       R +  L  +  P+   + KF TKKARV ++SSGRS SQPSLAEYLAASFNE  N+
Subjt:  EQFYNASIRCLKIPGRFCNLVFGRQL--LHQAVLPT---LRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVND
A0A6J1L0Q3 protein SICKLE isoform X21.3e-3074Show/hide
Query:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
        MEESEKRRERLRAMRMEA+QADVA Y+ETSLPN LSNPLVESS  M G+SEPCTAPRFDYYTNPM AFS++K++GNQ VSH       N SP  YVP +F
Subjt:  MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSH-------NHSPATYVPGSF
SwissProt top hitse value%identityAlignment
Q9SB47 Protein SICKLE7.6e-0943.56Show/hide
Query:  MEESEKRRERLRAMRMEAA---QADVATYVETSL-PNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKR----KGNQLVSHNHSPATYVPGS
        ME+SEKR++ L+AMRMEAA     D  T  ETS+    LSNPL E+S   +   E     RFDYYT+PM A+S+ K+    K   + S +H  ++ VP  
Subjt:  MEESEKRRERLRAMRMEAA---QADVATYVETSL-PNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKR----KGNQLVSHNHSPATYVPGS

Query:  F
        F
Subjt:  F
Arabidopsis top hitse value%identityAlignment
AT4G24500.1 hydroxyproline-rich glycoprotein family protein5.4e-1043.56Show/hide
Query:  MEESEKRRERLRAMRMEAA---QADVATYVETSL-PNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKR----KGNQLVSHNHSPATYVPGS
        ME+SEKR++ L+AMRMEAA     D  T  ETS+    LSNPL E+S   +   E     RFDYYT+PM A+S+ K+    K   + S +H  ++ VP  
Subjt:  MEESEKRRERLRAMRMEAA---QADVATYVETSL-PNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKR----KGNQLVSHNHSPATYVPGS

Query:  F
        F
Subjt:  F
AT4G24500.3 hydroxyproline-rich glycoprotein family protein5.4e-1043.56Show/hide
Query:  MEESEKRRERLRAMRMEAA---QADVATYVETSL-PNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKR----KGNQLVSHNHSPATYVPGS
        ME+SEKR++ L+AMRMEAA     D  T  ETS+    LSNPL E+S   +   E     RFDYYT+PM A+S+ K+    K   + S +H  ++ VP  
Subjt:  MEESEKRRERLRAMRMEAA---QADVATYVETSL-PNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKR----KGNQLVSHNHSPATYVPGS

Query:  F
        F
Subjt:  F

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATCTGAGAAACGAAGGGAGAGACTGAGAGCAATGCGAATGGAAGCTGCTCAAGCTGATGTCGCTACTTATGTCGAAACTTCTTTGCCTAATCGTCTTTCCAA
TCCATTGGTTGAGTCCTCAACTACCATGGAAGGGGAATCAGAACCATGTACCGCCCCGAGATTCGACTATTACACAAACCCTATGCCTGCGTTTTCTGCTACAAAGAGGA
AAGGGAATCAGCTTGTTTCTCACAATCATTCTCCAGCTACTTATGTTCCAGGTAGTTTTATGCAGAAAGAACAATTTTACAATGCATCGATTCGATGCTTGAAGATCCCT
GGAAGGTTCTGCAACCTGGTATTTGGAAGACAGTTGCTACATCAAGCAGTTCTGCCAACCCTTCGCAAGTTCAGAACGAAAAAAGCAAGAGTTTCAAATTCTTCTTCTGG
CAGGTCAAGCTCGCAACCAAGCCTTGCCGAGTACCTGGCTGCTTCCTTCAACGAAACAGTGAATGATGCACCAAATGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAATCTGAGAAACGAAGGGAGAGACTGAGAGCAATGCGAATGGAAGCTGCTCAAGCTGATGTCGCTACTTATGTCGAAACTTCTTTGCCTAATCGTCTTTCCAA
TCCATTGGTTGAGTCCTCAACTACCATGGAAGGGGAATCAGAACCATGTACCGCCCCGAGATTCGACTATTACACAAACCCTATGCCTGCGTTTTCTGCTACAAAGAGGA
AAGGGAATCAGCTTGTTTCTCACAATCATTCTCCAGCTACTTATGTTCCAGGTAGTTTTATGCAGAAAGAACAATTTTACAATGCATCGATTCGATGCTTGAAGATCCCT
GGAAGGTTCTGCAACCTGGTATTTGGAAGACAGTTGCTACATCAAGCAGTTCTGCCAACCCTTCGCAAGTTCAGAACGAAAAAAGCAAGAGTTTCAAATTCTTCTTCTGG
CAGGTCAAGCTCGCAACCAAGCCTTGCCGAGTACCTGGCTGCTTCCTTCAACGAAACAGTGAATGATGCACCAAATGCATGA
Protein sequenceShow/hide protein sequence
MEESEKRRERLRAMRMEAAQADVATYVETSLPNRLSNPLVESSTTMEGESEPCTAPRFDYYTNPMPAFSATKRKGNQLVSHNHSPATYVPGSFMQKEQFYNASIRCLKIP
GRFCNLVFGRQLLHQAVLPTLRKFRTKKARVSNSSSGRSSSQPSLAEYLAASFNETVNDAPNA