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Sed0021676 (gene) of Chayote v1 genome

Gene IDSed0021676
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like
Genome locationLG08:35699854..35706402
RNA-Seq ExpressionSed0021676
SyntenySed0021676
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR039993 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137473.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucumis sativus]6.5e-4893.75Show/hide
Query:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFD+SPPD FD ENPYKDPVAMLEMRE+IVREKWIDIEKAKILREKLRWCYR+EG+NHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022137450.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Momordica charantia]1.7e-4893.75Show/hide
Query:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFD+SPPD FDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRE+LRWCYR+EG+NHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022954577.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata]3.8e-4893.75Show/hide
Query:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFD+SPPD FDAE+PYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYR+EG+NHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022994087.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima]1.3e-4894.79Show/hide
Query:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFD+SPPD FDAE+PYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYR+EG+NHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_038894613.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida]5.0e-4893.75Show/hide
Query:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFD+SPPD FD E+PYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYR+EG+NHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

TrEMBL top hitse value%identityAlignment
A0A0A0LSZ4 Uncharacterized protein3.2e-4893.75Show/hide
Query:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFD+SPPD FD ENPYKDPVAMLEMRE+IVREKWIDIEKAKILREKLRWCYR+EG+NHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A1S3C7E2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B3.2e-4893.75Show/hide
Query:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFD+SPPD FD ENPYKDPVAMLEMRE+IVREKWIDIEKAKILREKLRWCYR+EG+NHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1C6P3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B8.3e-4993.75Show/hide
Query:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGR+KTVEFD+SPPD FDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRE+LRWCYR+EG+NHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1GRC0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like1.9e-4893.75Show/hide
Query:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFD+SPPD FDAE+PYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYR+EG+NHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1JUQ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like6.4e-4994.79Show/hide
Query:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFD+SPPD FDAE+PYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYR+EG+NHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

SwissProt top hitse value%identityAlignment
Q03015 NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial5.3e-0837.97Show/hide
Query:  MGRKKTVEFDDSPP--DGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYL
        + +K TV     PP  DG D    Y D   + + ++ I+RE+W+ +   +++RE+L  CY  EG+NHL+KC HL ++YL
Subjt:  MGRKKTVEFDDSPP--DGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYL

Q94C12 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B8.6e-4382.47Show/hide
Query:  MGRKKTV-EFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF++S PDGFD ENPYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYRVEG+NH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

Q9M9B4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A2.5e-4281.44Show/hide
Query:  MGRKKTV-EFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF++S PDGFD ENPYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYRVEG+NH QKCRHLVQQYLD+TRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

Arabidopsis top hitse value%identityAlignment
AT1G49140.1 Complex I subunit NDUFS61.8e-4381.44Show/hide
Query:  MGRKKTV-EFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF++S PDGFD ENPYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYRVEG+NH QKCRHLVQQYLD+TRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

AT3G18410.1 Complex I subunit NDUFS66.1e-4482.47Show/hide
Query:  MGRKKTV-EFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF++S PDGFD ENPYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYRVEG+NH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

AT3G18410.2 Complex I subunit NDUFS66.1e-4482.47Show/hide
Query:  MGRKKTV-EFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF++S PDGFD ENPYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYRVEG+NH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGAAGAAGACGGTGGAATTCGACGATTCGCCGCCGGACGGATTCGATGCGGAGAATCCGTACAAGGATCCGGTGGCGATGCTGGAGATGAGGGAGCACATCGT
GAGAGAGAAATGGATCGACATCGAAAAGGCCAAGATTCTGAGGGAAAAGCTCAGATGGTGCTATCGCGTCGAAGGAATCAACCATCTTCAGAAATGCCGACACCTTGTTC
AGCAGTACCTTGATTCCACTCGCGGCATCGGCTGGGGCAAGGACGGACGCCATCCATCTCTCCACGGTTTTCTCTTTTCGCCCTTCCTTCTTAAATTGCTGGGAGGAATA
ATGGAATGGTTGCTAAAGAATGATTCAGAAACTTTGGAAATCGAAATACGATGCCATTTTGTGAATCAGAAATGGAACAAACTGACAAAGTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGAAGAAGACGGTGGAATTCGACGATTCGCCGCCGGACGGATTCGATGCGGAGAATCCGTACAAGGATCCGGTGGCGATGCTGGAGATGAGGGAGCACATCGT
GAGAGAGAAATGGATCGACATCGAAAAGGCCAAGATTCTGAGGGAAAAGCTCAGATGGTGCTATCGCGTCGAAGGAATCAACCATCTTCAGAAATGCCGACACCTTGTTC
AGCAGTACCTTGATTCCACTCGCGGCATCGGCTGGGGCAAGGACGGACGCCATCCATCTCTCCACGGTTTTCTCTTTTCGCCCTTCCTTCTTAAATTGCTGGGAGGAATA
ATGGAATGGTTGCTAAAGAATGATTCAGAAACTTTGGAAATCGAAATACGATGCCATTTTGTGAATCAGAAATGGAACAAACTGACAAAGTGGTGAGAATAATCGTCAAA
CTCATAGAGGAAAGCTTTGTACTGTTACAGAACGAAAGTGAATTATAATATGTGAGTGTTTAATGAACTCTTCTGTCATAATTTGCACTACAAAAAATAAATTTTCTATG
CTTATATAGCCAATGCCATAGCCGAATGACAGCAAATTATTGTCATTCTCAGAATGTAAATTTTATGTACCTAAAAATTCAGAAGGTTGGTCTGG
Protein sequenceShow/hide protein sequence
MGRKKTVEFDDSPPDGFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGFLFSPFLLKLLGGI
MEWLLKNDSETLEIEIRCHFVNQKWNKLTKW