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Sed0021677 (gene) of Chayote v1 genome

Gene IDSed0021677
OrganismSechium edule (Chayote v1)
DescriptionS-protein homolog
Genome locationLG02:50671950..50672378
RNA-Seq ExpressionSed0021677
SyntenySed0021677
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK17379.1 self-incompatibility family protein [Cucumis melo var. makuwa]2.9e-7292.25Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRF
        MKIL+SILMLIFFPFFTVF+SLLPA+QL+G EYEVRVINGFTNNSSLPLV+WCASKD DIGGRALQEHDDFSWPVKTNFWI TTSQFSCTVKLDRTRK F
Subjt:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRF

Query:  DAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSA +KCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_004134017.2 S-protein homolog 6 [Cucumis sativus]7.2e-7191.61Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWI-ATTSQFSCTVKLDRTRKR
        MKIL+SILMLIFFPFFTVF+SLLPA+QL+G EYEVRVINGFTNNSSLPLV+WCASKD DIGGRALQEHDDFSWPVKTNFWI  TTSQFSCTVKLDRTRK 
Subjt:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWI-ATTSQFSCTVKLDRTRKR

Query:  FDAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSA +KCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_016898907.1 PREDICTED: uncharacterized protein LOC103483510 [Cucumis melo]7.2e-7191.61Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWI-ATTSQFSCTVKLDRTRKR
        MKIL+SILMLIFFPFFTVF+SLLPA+QL+G EYEVRVINGFTNNSSLPLV+WCASKD DIGGRALQEHDDFSWPVKTNFWI  TTSQFSCTVKLDRTRK 
Subjt:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWI-ATTSQFSCTVKLDRTRKR

Query:  FDAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSA +KCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_022949667.1 S-protein homolog 5 [Cucurbita moschata]2.5e-7192.25Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRF
        MKILISILMLIFFPFFTVFMSLLP D LYG EYEVRVINGFTNNSSLPLV+WCASKD DIGGRALQEHDDFSW VKTNFWI TTSQFSCTVKLDRTR+ F
Subjt:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRF

Query:  DAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSAF+KCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  DAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_038876719.1 S-protein homolog 6-like [Benincasa hispida]5.0e-7292.25Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRF
        MKILISILMLIFFPFF+VF+SLLPA+QL+G EYEVRVINGFTNNSSLPLV+WCASKD DIGGRALQEHDDFSWPVKTNFWI TTSQFSCTVKLDRTRK F
Subjt:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRF

Query:  DAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSA +KCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW

TrEMBL top hitse value%identityAlignment
A0A0A0L6V3 S-protein homolog8.1e-6091.53Show/hide
Query:  DQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWI-ATTSQFSCTVKLDRTRKRFDAFKVPRDIYRCSAFKKCSWLVME
        +QL+G EYEVRVINGFTNNSSLPLV+WCASKD DIGGRALQEHDDFSWPVKTNFWI  TTSQFSCTVKLDRTRK FDAFKVPRDIYRCSA +KCSWLVME
Subjt:  DQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWI-ATTSQFSCTVKLDRTRKRFDAFKVPRDIYRCSAFKKCSWLVME

Query:  DGFYFSDDEVNWKKDFSW
        DGFYFSDDEVNWKKDFSW
Subjt:  DGFYFSDDEVNWKKDFSW

A0A1S4DSD2 S-protein homolog3.5e-7191.61Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWI-ATTSQFSCTVKLDRTRKR
        MKIL+SILMLIFFPFFTVF+SLLPA+QL+G EYEVRVINGFTNNSSLPLV+WCASKD DIGGRALQEHDDFSWPVKTNFWI  TTSQFSCTVKLDRTRK 
Subjt:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWI-ATTSQFSCTVKLDRTRKR

Query:  FDAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSA +KCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5A7U6C9 S-protein homolog3.5e-7191.61Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWI-ATTSQFSCTVKLDRTRKR
        MKIL+SILMLIFFPFFTVF+SLLPA+QL+G EYEVRVINGFTNNSSLPLV+WCASKD DIGGRALQEHDDFSWPVKTNFWI  TTSQFSCTVKLDRTRK 
Subjt:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWI-ATTSQFSCTVKLDRTRKR

Query:  FDAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSA +KCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5D3D3G0 S-protein homolog1.4e-7292.25Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRF
        MKIL+SILMLIFFPFFTVF+SLLPA+QL+G EYEVRVINGFTNNSSLPLV+WCASKD DIGGRALQEHDDFSWPVKTNFWI TTSQFSCTVKLDRTRK F
Subjt:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRF

Query:  DAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSA +KCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A6J1GCS3 S-protein homolog1.2e-7192.25Show/hide
Query:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRF
        MKILISILMLIFFPFFTVFMSLLP D LYG EYEVRVINGFTNNSSLPLV+WCASKD DIGGRALQEHDDFSW VKTNFWI TTSQFSCTVKLDRTR+ F
Subjt:  MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRF

Query:  DAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSAF+KCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  DAFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26798.1 Plant self-incompatibility protein S1 family3.3e-0528.91Show/hide
Query:  ILISILMLIFFPFFTVFMSLLPAD-QLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRFD
        I + I  L+ F     F +    D  L      V +IN  T N    LVV C +K  D+G  AL+  +   +  + N  +  T+ ++CT       K FD
Subjt:  ILISILMLIFFPFFTVFMSLLPAD-QLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRFD

Query:  AFKVPRD---IYRCSAFKKCSWLVMEDG
         F+V RD      C   ++C W + E G
Subjt:  AFKVPRD---IYRCSAFKKCSWLVMEDG

AT3G24060.1 Plant self-incompatibility protein S1 family4.6e-3953.9Show/hide
Query:  ILISILMLIFFPFFTVF-MSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRFD
        I++ + MLI      +F + L P     G E++VRVIN F +NSSLPLV+WC S   D+GGRALQE DDF W  K + W +  ++++CT+K D  RK+F+
Subjt:  ILISILMLIFFPFFTVF-MSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRFD

Query:  AFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW
        AFKV RD  RC + KKCSW V EDGFYFS DEV W KDFSW
Subjt:  AFKVPRDIYRCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW

AT4G16195.1 Plant self-incompatibility protein S1 family9.6e-0527.45Show/hide
Query:  SSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRFDAFKVPRDI---YRCSAFKKCSWLVMEDG-FYFSDDEVNWKKDF
        + L L+  C SKDDD+G R LQ  + +S+     F+  T   + C+         FD +K  RD     +C +  +C W +  +G   F+D+   +   +
Subjt:  SSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRFDAFKVPRDI---YRCSAFKKCSWLVMEDG-FYFSDDEVNWKKDF

Query:  SW
         W
Subjt:  SW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTCTCATTAGCATTCTTATGCTCATTTTCTTCCCATTCTTCACTGTTTTCATGTCATTGTTACCTGCAGACCAACTGTATGGCACAGAATACGAAGTCCGTGT
GATCAATGGCTTCACAAACAACTCCTCACTGCCTCTGGTGGTATGGTGCGCGTCCAAAGACGATGATATCGGCGGGCGTGCGCTTCAGGAGCATGACGATTTCAGTTGGC
CTGTCAAGACCAACTTCTGGATTGCTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAGAGGTTTGATGCATTCAAGGTACCTAGAGACATCTAC
CGCTGTAGCGCTTTCAAGAAATGCTCTTGGTTGGTTATGGAAGATGGATTTTATTTCAGTGACGACGAAGTCAACTGGAAGAAGGATTTCTCGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATTCTCATTAGCATTCTTATGCTCATTTTCTTCCCATTCTTCACTGTTTTCATGTCATTGTTACCTGCAGACCAACTGTATGGCACAGAATACGAAGTCCGTGT
GATCAATGGCTTCACAAACAACTCCTCACTGCCTCTGGTGGTATGGTGCGCGTCCAAAGACGATGATATCGGCGGGCGTGCGCTTCAGGAGCATGACGATTTCAGTTGGC
CTGTCAAGACCAACTTCTGGATTGCTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAGAGGTTTGATGCATTCAAGGTACCTAGAGACATCTAC
CGCTGTAGCGCTTTCAAGAAATGCTCTTGGTTGGTTATGGAAGATGGATTTTATTTCAGTGACGACGAAGTCAACTGGAAGAAGGATTTCTCGTGGTAA
Protein sequenceShow/hide protein sequence
MKILISILMLIFFPFFTVFMSLLPADQLYGTEYEVRVINGFTNNSSLPLVVWCASKDDDIGGRALQEHDDFSWPVKTNFWIATTSQFSCTVKLDRTRKRFDAFKVPRDIY
RCSAFKKCSWLVMEDGFYFSDDEVNWKKDFSW