| GenBank top hits | e value | %identity | Alignment |
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| KAA3467625.1 reverse transcriptase [Gossypium australe] | 5.5e-18 | 25.44 | Show/hide |
Query: SIVKIEKALEFVPCRVSGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTFIRDKLSEA-------------
S K+ + E + SY + L + LP K+KL IW++S N++P +VNL + V + C CG ED NH F +S+A
Subjt: SIVKIEKALEFVPCRVSGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTFIRDKLSEA-------------
Query: -------------------KFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVH--------------------GVSRKLNVEAAVSADRVG
K + C LW IW DRN +H E + + ++ Y+ E+ G K+N + A A R
Subjt: -------------------KFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVH--------------------GVSRKLNVEAAVSADRVG
Query: VGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQG
LG +VRD +GR + + A EALA + V++E D+ I++ +NP GV +IQG
Subjt: VGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQG
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| KAA3487748.1 reverse transcriptase [Gossypium australe] | 6.1e-17 | 24.73 | Show/hide |
Query: SIVKIEKALEFVPCRVSGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTFIRDKLSEA-------------
S K+ + E + SY + L + LP K+KL IW++S N++P +VNL + V + C CG ED NH F +S+A
Subjt: SIVKIEKALEFVPCRVSGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTFIRDKLSEA-------------
Query: -------------------KFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVH--------------------GVSRKLNVEAAVSADRVG
K ++ C LW IW DRN ++ E + + ++ Y+ E+ G K+N + A A R
Subjt: -------------------KFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVH--------------------GVSRKLNVEAAVSADRVG
Query: VGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQG
LG +VRD +GR + + A +AL + V++E D+ I++ +NP S GV +IQG
Subjt: VGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQG
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| KAG8499524.1 hypothetical protein CXB51_006063 [Gossypium anomalum] | 1.2e-17 | 26.47 | Show/hide |
Query: YGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTF----IRDKLSEAKFEVMCIALWAIWFDRNKTLHGENIPEV
YG+ + L + LPNK+K+ +WR+S N++P RVN+ + + + C CG E +H F + +LS + + C LW IW +RN+ +H + I
Subjt: YGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTF----IRDKLSEAKFEVMCIALWAIWFDRNKTLHGENIPEV
Query: EVRVDWINNYVAEVHGVS--------------------RKLNVEAAVSADRVGVGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREG
+ VD+INN++AE+ G+ K+N + A A+ G + R+ +G + + A EA+A +Q+ +
Subjt: EVRVDWINNYVAEVHGVS--------------------RKLNVEAAVSADRVGVGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREG
Query: FSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQGSV
+ VL+E D+ I++ + S G +IQ V
Subjt: FSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQGSV
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| XP_042950144.1 uncharacterized protein LOC122282259 [Carya illinoinensis] | 3.9e-16 | 23.88 | Show/hide |
Query: SGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTF--------------------------------IRDKL
S S S+ + + M LP KI++F W+L + +P +NL+ KHVD +C +C + ED + + +K
Subjt: SGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTF--------------------------------IRDKL
Query: SEAKFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVHGVSR---------------------KLNVEAAVSADRVGVGLGAIVRDHQGRCW
+ + + C+ W W+ RN+ H + ++ VD + + S+ KLN++ A+ D+ G+GA++RD +G
Subjt: SEAKFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVHGVSR---------------------KLNVEAAVSADRVGVGLGAIVRDHQGRCW
Query: AASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGI-DNPRLRSSNWGVIFCEIQ
A++ + +E +A+L GLQ+ ++ G S ++VESD KL+VE + P+ +S G + E++
Subjt: AASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGI-DNPRLRSSNWGVIFCEIQ
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| XP_042965942.1 uncharacterized protein LOC122299620 [Carya illinoinensis] | 9.4e-18 | 24.25 | Show/hide |
Query: SGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTF--------------------------------IRDKL
S S S+ + + M LP KI++F W+L + +P +NL+ +HVD +C +C + ED +H + +K
Subjt: SGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTF--------------------------------IRDKL
Query: SEAKFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVHGVSR---------------------KLNVEAAVSADRVGVGLGAIVRDHQGRCW
+ + + C+ W+ W+ RN+ +H + ++ VD + + S+ KLNV+ A+ D+ G+GA++RD +G
Subjt: SEAKFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVHGVSR---------------------KLNVEAAVSADRVGVGLGAIVRDHQGRCW
Query: AASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGI-DNPRLRSSNWGVIFCEIQ
A++ + +E +A+L GLQ+ ++ G S ++VESD KL+VE + P+ +S G + E++
Subjt: AASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGI-DNPRLRSSNWGVIFCEIQ
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2N9IUU4 Uncharacterized protein | 6.5e-17 | 27.35 | Show/hide |
Query: LPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTF---IRDKLSEAKFEVMCIALWAIWFDRNKTLHGENIPEVEVRV-----DWIN
LP KI+ F+WRLS N +P R NLV +++ +P+EC +CG E + H F I + E +++ + W++W RN + ++ ++ +V +I
Subjt: LPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTF---IRDKLSEAKFEVMCIALWAIWFDRNKTLHGENIPEVEVRV-----DWIN
Query: NY-------VAEVHGVSR-------------KLNVEAAVSADRVGVGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVES
+ V+ V ++R K+N++ AV AD VG+G ++R+ QG A L LD EALA L ++ +L E
Subjt: NY-------VAEVHGVSR-------------KLNVEAAVSADRVGVGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVES
Query: DAKLIVEGIDNPRLRSSNWGVIF
D ++ + +P ++ G I+
Subjt: DAKLIVEGIDNPRLRSSNWGVIF
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| A0A5B6UF59 Reverse transcriptase | 3.6e-15 | 25.82 | Show/hide |
Query: SYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTF--------------------------------IRDKLSE
SY V + L + LP KIKL IW+++ NF+P R NL + + C CG E +H F + ++++
Subjt: SYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTF--------------------------------IRDKLSE
Query: AKFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVHGVSRKLNVEAAVSADRVGVGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLY
+ + C ALWAIW D N +H + + ++I NY+AE+ S K+NV+ A + G +VRD++G + + EA+A
Subjt: AKFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVHGVSRKLNVEAAVSADRVGVGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLY
Query: GLQMVVREGFSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQ
+Q+ V G+ +++E D+ I++ N S G +IQ
Subjt: GLQMVVREGFSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQ
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| A0A5B6VBQ8 Reverse transcriptase | 1.9e-16 | 26.87 | Show/hide |
Query: VSGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTFIRDKLSEA------------KFEVMCIALWAIWFDR
V Y + L + LP KIK+ W++S N++P R N+ + + + C CG +E+ NH F +S + + E+ C ALWAIW DR
Subjt: VSGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTFIRDKLSEA------------KFEVMCIALWAIWFDR
Query: NKTLHGENIPEVEVRVDWINNYVAEVHGVSRKL--------------------NVEAAVSADRVGVGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALA
NK +H + + +IN YV+++ GV KL N +AA + +G + R+ +G + + Q A EA+A
Subjt: NKTLHGENIPEVEVRVDWINNYVAEVHGVSRKL--------------------NVEAAVSADRVGVGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALA
Query: LLYGLQMVVREGFSGVLVESDAKLIVE
LQ+ V ++ ++E DA L+++
Subjt: LLYGLQMVVREGFSGVLVESDAKLIVE
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| A0A5B6VEN5 Reverse transcriptase | 2.7e-18 | 25.44 | Show/hide |
Query: SIVKIEKALEFVPCRVSGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTFIRDKLSEA-------------
S K+ + E + SY + L + LP K+KL IW++S N++P +VNL + V + C CG ED NH F +S+A
Subjt: SIVKIEKALEFVPCRVSGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTFIRDKLSEA-------------
Query: -------------------KFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVH--------------------GVSRKLNVEAAVSADRVG
K + C LW IW DRN +H E + + ++ Y+ E+ G K+N + A A R
Subjt: -------------------KFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVH--------------------GVSRKLNVEAAVSADRVG
Query: VGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQG
LG +VRD +GR + + A EALA + V++E D+ I++ +NP GV +IQG
Subjt: VGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQG
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| A0A5B6X1R5 Reverse transcriptase | 2.9e-17 | 24.73 | Show/hide |
Query: SIVKIEKALEFVPCRVSGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTFIRDKLSEA-------------
S K+ + E + SY + L + LP K+KL IW++S N++P +VNL + V + C CG ED NH F +S+A
Subjt: SIVKIEKALEFVPCRVSGSYGSVVEPLMGMILPNKIKLFIWRLSNNFIPNRVNLVAKHVDTPIECVVCGMEIEDSNHTFIRDKLSEA-------------
Query: -------------------KFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVH--------------------GVSRKLNVEAAVSADRVG
K ++ C LW IW DRN ++ E + + ++ Y+ E+ G K+N + A A R
Subjt: -------------------KFEVMCIALWAIWFDRNKTLHGENIPEVEVRVDWINNYVAEVH--------------------GVSRKLNVEAAVSADRVG
Query: VGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQG
LG +VRD +GR + + A +AL + V++E D+ I++ +NP S GV +IQG
Subjt: VGLGAIVRDHQGRCWAASTTFLPQCLDLAAVEALALLYGLQMVVREGFSGVLVESDAKLIVEGIDNPRLRSSNWGVIFCEIQG
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