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Sed0021698 (gene) of Chayote v1 genome

Gene IDSed0021698
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:7447037..7447587
RNA-Seq ExpressionSed0021698
SyntenySed0021698
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649159.1 hypothetical protein Csa_014463, partial [Cucumis sativus]1.3e-1774.65Show/hide
Query:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAAT---SSGGGSFLARKSKVHPGSIAPVTAADSYNNR
        MSS+GASYA IHLLQK+QKEKLERME +R SRGE AT   SS GGS LAR  KVHPGSIAP T  DSY NR
Subjt:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAAT---SSGGGSFLARKSKVHPGSIAPVTAADSYNNR

KAG4920164.1 hypothetical protein JHK86_048977 [Glycine max]5.7e-0548.48Show/hide
Query:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAATSSGG-GSFLARKSKVHPGSIAPVTAADSY
        MSSIGA  A I++++K+QKEKL+RME +R+ RGE +T      S    K+KVHPGS   VT+ +++
Subjt:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAATSSGG-GSFLARKSKVHPGSIAPVTAADSY

KAG6577271.1 hypothetical protein SDJN03_24845, partial [Cucurbita argyrosperma subsp. sororia]3.6e-1574.65Show/hide
Query:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAA---TSSGGGSFLARKSKVHPGSIAPVTAADSYNNR
        MSSIGASYA IHLLQK+QK+KLE MEA+R SRGEAA   +S GGGS LAR +KVHPGSIAPV  ADS  NR
Subjt:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAA---TSSGGGSFLARKSKVHPGSIAPVTAADSYNNR

KAG6600624.1 hypothetical protein SDJN03_05857, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2184.29Show/hide
Query:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAAT--SSGGGSFLARKSKVHPGSIAPVTAADSYNNR
        MSSIGASYA IHLLQK+QKEKLERMEADR+SRGEA T  SSGGGS LARK+KVHPGSIAP  AADSY NR
Subjt:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAAT--SSGGGSFLARKSKVHPGSIAPVTAADSYNNR

PON65265.1 hypothetical protein PanWU01x14_117820 [Parasponia andersonii]1.5e-0549.21Show/hide
Query:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGE--------AATSSGGGSFLARKSKVHPGS
        MSSIGAS A ++++QK+QKEK+ERME +R  RGE        +  S GG + L R  K+HPG+
Subjt:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGE--------AATSSGGGSFLARKSKVHPGS

TrEMBL top hitse value%identityAlignment
A0A2N9EUS9 Uncharacterized protein3.6e-0553.57Show/hide
Query:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAAT--SSGGGSFLARKSKVHPG
        MSSIGAS A I++++K+QKEKL+RME +R+ +GE++   S   GS + R  KVHPG
Subjt:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAAT--SSGGGSFLARKSKVHPG

A0A2P5CW36 Uncharacterized protein7.3e-0649.21Show/hide
Query:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGE--------AATSSGGGSFLARKSKVHPGS
        MSSIGAS A ++++QK+QKEK+ERME +R  RGE        +  S GG + L R  K+HPG+
Subjt:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGE--------AATSSGGGSFLARKSKVHPGS

A0A445FMY7 Uncharacterized protein2.8e-0548.48Show/hide
Query:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAATSSGG-GSFLARKSKVHPGSIAPVTAADSY
        MSSIGA  A I++++K+QKEKL+RME +R+ RGE +T      S    K+KVHPGS   VT+ +++
Subjt:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAATSSGG-GSFLARKSKVHPGSIAPVTAADSY

A0A5D2RJ04 Uncharacterized protein6.2e-0542.86Show/hide
Query:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRG-EAATSSGGGSFLARKSKVHPGSIAPVTAADSYNNRK
        MSS+GAS A ++++QK+QKEK++RME ++ SRG E +T     + +  +SKV PG  AP +A+ S + ++
Subjt:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRG-EAATSSGGGSFLARKSKVHPGSIAPVTAADSYNNRK

I1MYV6 Uncharacterized protein2.8e-0548.48Show/hide
Query:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAATSSGG-GSFLARKSKVHPGSIAPVTAADSY
        MSSIGA  A I++++K+QKEKL+RME +R+ RGE +T      S    K+KVHPGS   VT+ +++
Subjt:  MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAATSSGG-GSFLARKSKVHPGSIAPVTAADSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G39675.1 unknown protein1.8e-0462.07Show/hide
Query:  MSSIGASYANIHLLQKKQKEKLERMEADR
        MSSIGASYA++ ++QKKQKEK++++E +R
Subjt:  MSSIGASYANIHLLQKKQKEKLERMEADR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCCATTGGAGCTTCCTATGCCAACATTCACCTCCTACAGAAGAAACAAAAGGAGAAACTCGAGAGAATGGAAGCGGATCGATTGTCCCGAGGCGAGGCTGCCAC
CAGCTCCGGTGGGGGTTCTTTTCTTGCAAGGAAGAGCAAAGTTCACCCGGGAAGCATTGCTCCGGTAACCGCTGCCGACAGCTACAATAACAGGAAATGA
mRNA sequenceShow/hide mRNA sequence
CCTAACCAAAGACATGCATGGCCTATAAATACAACCAAATTCAAAGCCTCTAAACACATCAAAACCAAAACAAAACCAAAATCCTAGCTCCTTCTTTGTTACCTATTTTT
TTCAAAACCATGTCATCCATTGGAGCTTCCTATGCCAACATTCACCTCCTACAGAAGAAACAAAAGGAGAAACTCGAGAGAATGGAAGCGGATCGATTGTCCCGAGGCGA
GGCTGCCACCAGCTCCGGTGGGGGTTCTTTTCTTGCAAGGAAGAGCAAAGTTCACCCGGGAAGCATTGCTCCGGTAACCGCTGCCGACAGCTACAATAACAGGAAATGAC
TTTGTGTTCTTCATGAACTGTTTTTCTTTTTGTAGTGTCTATAAAATTTAAAAGCTTTGTCTTTCTTTGGTTTGTGTAAATGTGTTTAAAAAATGTCTGTCAAAAACTAA
AAGAGAAAAAGAATAGTGTGTCTTTTTGGTTTACTCTTTCATGTTCTAGTATGTATTTTCCAATGTTTCATGCCATAATTTAAGAATGTTCTGTTTGGTGTTTTATATTT
A
Protein sequenceShow/hide protein sequence
MSSIGASYANIHLLQKKQKEKLERMEADRLSRGEAATSSGGGSFLARKSKVHPGSIAPVTAADSYNNRK