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Sed0021709 (gene) of Chayote v1 genome

Gene IDSed0021709
OrganismSechium edule (Chayote v1)
Descriptionprotein LURP-one-related 7
Genome locationLG01:9041246..9043703
RNA-Seq ExpressionSed0021709
SyntenySed0021709
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007612 - LURP-one-related
IPR025659 - Tubby-like, C-terminal
IPR038595 - LURP-one-related superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022948358.1 protein LURP-one-related 7 [Cucurbita moschata]1.5e-8486.1Show/hide
Query:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVNK
        MANSSDPAIC+A+LPIPVDLFLSKKHPDHVT SSGD ++ LSRQSL KSSSIDKI+L DAAAAA PL+SI RVNKESWQGFKGD+ E DLLFKV+RT+NK
Subjt:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVNK

Query:  LTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV
        L R EFKVFLVGEN DDSNASLEMKG PFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPG+VDP+LI+ALIVIFFDGR+
Subjt:  LTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV

XP_022998604.1 protein LURP-one-related 7 [Cucurbita maxima]2.7e-8184.57Show/hide
Query:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLD-AAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVN
        MA SSDPAIC+A LPIPVDLFLSKKHPDHVT+SSGDI++ LSRQ L KSSSIDKI+L D AAAAA PL+SI RVNKESWQGFKGD+ E D LFKVQRT+N
Subjt:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLD-AAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVN

Query:  KLTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV
        KL R EFKVFLVGEN D+SNASLEMKG PFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPG+VDP+LI+ALIVIFFDGR+
Subjt:  KLTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV

XP_023523464.1 protein LURP-one-related 7 isoform X1 [Cucurbita pepo subsp. pepo]1.4e-8284.74Show/hide
Query:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLD---AAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRT
        MANSSDPAIC+A LPIPVDLFLSKKHPDHVT SSG+I++ LSRQSL KSSSIDKI+L D   AAAAA PL+SI RVNKESWQGFKGD+ E DLLFKV+RT
Subjt:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLD---AAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRT

Query:  VNKLTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV
        +NKL R EFKVFLVGEN DDSNASLEMKG PFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPG+VDP+LI+ALIVIFFDGR+
Subjt:  VNKLTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV

XP_023523465.1 protein LURP-one-related 7 isoform X2 [Cucurbita pepo subsp. pepo]1.1e-8285.19Show/hide
Query:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLD--AAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTV
        MANSSDPAIC+A LPIPVDLFLSKKHPDHVT SSG+I++ LSRQSL KSSSIDKI+L D  AAAAA PL+SI RVNKESWQGFKGD+ E DLLFKV+RT+
Subjt:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLD--AAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTV

Query:  NKLTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV
        NKL R EFKVFLVGEN DDSNASLEMKG PFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPG+VDP+LI+ALIVIFFDGR+
Subjt:  NKLTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV

XP_038884438.1 protein LURP-one-related 7 [Benincasa hispida]1.3e-8084.49Show/hide
Query:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVNK
        MANSSDPAICSA LPI VDLFLSK+HPD++TNSSGDI+Y ++R SL KSSS+DKI+LLD AAAADPL+SI RVNKESWQGFKGDV E DLLFKVQRT+NK
Subjt:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVNK

Query:  LTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV
        L R EFKVFLVGE+LDDSNASLEMKG PFQRSCTIYKGNTIVAQTSLMHKLHQI VRRGRFRLTIFP  VDPALI+AL+VIFFDGR+
Subjt:  LTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV

TrEMBL top hitse value%identityAlignment
A0A0A0K429 Uncharacterized protein6.2e-7679.68Show/hide
Query:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVNK
        MAN SDPAICS  LPIP+DLFLSK+HPD++TNSSGDI+Y ++R +L KSSS+DKI LL  A AADPL+SI RVNKESW+GFKGDV E +LLFKVQRT+NK
Subjt:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVNK

Query:  LTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV
        L R EFKVFLVG NLDDSNAS EMKG PFQRSCT+Y GNTIVAQTSLMHKL QI VRRGRFRLTIFP SVDPALI+ALIVIFFDGR+
Subjt:  LTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV

A0A1S3CIB3 protein LURP-one-related 73.4e-7477.54Show/hide
Query:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVNK
        MANSSDP ICSA LPIP+DLFLSK+HP ++TNSSGDI+Y ++R +  KSSS+DKI LL  A AADPL+SI RVNKESW+GFKGDV E +LLFKVQRT+NK
Subjt:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVNK

Query:  LTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV
          R EF VFLVG NLDD N S EMKG PFQRSCT+Y GNTIVAQTSLMHKLHQI VRRGRFRLTIFP SVDPALI+ALIVIFFDGR+
Subjt:  LTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV

A0A6J1DNI1 protein LURP-one-related 71.0e-7882.45Show/hide
Query:  MANSSD-PAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVN
        MANSS  PA CSA LPIPVDLFLS KHPD++TNSSGDI++ LSRQS  KS SIDKILLLDAAAAADPL+SI R +KESW GFKGDV E +LLFKV R++N
Subjt:  MANSSD-PAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVN

Query:  KLTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV
        KLTR EFKVFL GENLDDSNASLEMKG PFQRSCTIYKGNTIVAQTSLMHKL+Q+ VRRGRFRLTIFPGSVDPALI+AL+VIFFDGR+
Subjt:  KLTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV

A0A6J1G943 protein LURP-one-related 77.3e-8586.1Show/hide
Query:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVNK
        MANSSDPAIC+A+LPIPVDLFLSKKHPDHVT SSGD ++ LSRQSL KSSSIDKI+L DAAAAA PL+SI RVNKESWQGFKGD+ E DLLFKV+RT+NK
Subjt:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVNK

Query:  LTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV
        L R EFKVFLVGEN DDSNASLEMKG PFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPG+VDP+LI+ALIVIFFDGR+
Subjt:  LTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV

A0A6J1KES0 protein LURP-one-related 71.3e-8184.57Show/hide
Query:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLD-AAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVN
        MA SSDPAIC+A LPIPVDLFLSKKHPDHVT+SSGDI++ LSRQ L KSSSIDKI+L D AAAAA PL+SI RVNKESWQGFKGD+ E D LFKVQRT+N
Subjt:  MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLD-AAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVN

Query:  KLTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV
        KL R EFKVFLVGEN D+SNASLEMKG PFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPG+VDP+LI+ALIVIFFDGR+
Subjt:  KLTRAEFKVFLVGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV

SwissProt top hitse value%identityAlignment
Q8GWL2 Protein LURP-one-related 71.3e-3047.43Show/hide
Query:  IPVDLFLSKKHPDHVTNSSGDIVYTLSRQS----LKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSE-PDLLFKVQRTVNKLTRAEFKVFL
        IPVDLF SKK P     SSGD+ +  S +     L+KSSS  K LL    ++  PL SI R++   W+  KGDV +  DL+  V+RT  + ++ E +V  
Subjt:  IPVDLFLSKKHPDHVTNSSGDIVYTLSRQS----LKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSE-PDLLFKVQRTVNKLTRAEFKVFL

Query:  VGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDG
         GE    S+ +L +KG PFQ+SCTIY  ++IVAQTSLM+KL QI V R +FRLTIFPGS+D +L++A++ IF  G
Subjt:  VGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDG

Arabidopsis top hitse value%identityAlignment
AT2G30270.1 Protein of unknown function (DUF567)9.3e-3247.43Show/hide
Query:  IPVDLFLSKKHPDHVTNSSGDIVYTLSRQS----LKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSE-PDLLFKVQRTVNKLTRAEFKVFL
        IPVDLF SKK P     SSGD+ +  S +     L+KSSS  K LL    ++  PL SI R++   W+  KGDV +  DL+  V+RT  + ++ E +V  
Subjt:  IPVDLFLSKKHPDHVTNSSGDIVYTLSRQS----LKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSE-PDLLFKVQRTVNKLTRAEFKVFL

Query:  VGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDG
         GE    S+ +L +KG PFQ+SCTIY  ++IVAQTSLM+KL QI V R +FRLTIFPGS+D +L++A++ IF  G
Subjt:  VGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATTCTTCAGACCCCGCCATTTGCTCTGCAACTCTCCCGATTCCCGTCGATCTCTTCCTATCCAAGAAACATCCCGATCACGTTACTAATTCCTCCGGTGATAT
CGTTTATACACTCAGTCGTCAATCTTTGAAGAAATCGTCGTCGATTGATAAGATTCTGCTGCTTGACGCCGCCGCCGCCGCCGATCCTCTCGTTTCCATCGATCGCGTTA
ACAAAGAATCTTGGCAAGGCTTTAAGGGGGACGTTAGTGAGCCGGACTTGCTCTTCAAAGTGCAAAGAACAGTGAACAAACTTACGAGAGCTGAGTTCAAAGTCTTCCTT
GTCGGCGAAAATTTAGACGACTCGAATGCTAGCTTGGAGATGAAGGGCTGTCCTTTCCAGAGATCCTGTACTATATATAAAGGCAATACAATTGTGGCCCAGACAAGCCT
GATGCACAAGCTTCATCAAATTTGTGTCAGAAGGGGAAGATTTCGACTAACCATTTTTCCTGGTTCTGTAGATCCAGCACTGATTTTGGCTTTGATTGTAATATTCTTTG
ATGGACGAGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATATTTTGAACTGTAGCTTCGAACAAATCAATATTCTGCATTTTCCTAAGAAAAGTAAATTACAATTCCAAGCTCTTTAAATCTCCAACCTCTCCTCTTTACAT
TTTTTCATTATTTTTTCTTTCATTTTCTTGCAATTTTCTACTGTTGATGGCTAATTCTTCAGACCCCGCCATTTGCTCTGCAACTCTCCCGATTCCCGTCGATCTCTTCC
TATCCAAGAAACATCCCGATCACGTTACTAATTCCTCCGGTGATATCGTTTATACACTCAGTCGTCAATCTTTGAAGAAATCGTCGTCGATTGATAAGATTCTGCTGCTT
GACGCCGCCGCCGCCGCCGATCCTCTCGTTTCCATCGATCGCGTTAACAAAGAATCTTGGCAAGGCTTTAAGGGGGACGTTAGTGAGCCGGACTTGCTCTTCAAAGTGCA
AAGAACAGTGAACAAACTTACGAGAGCTGAGTTCAAAGTCTTCCTTGTCGGCGAAAATTTAGACGACTCGAATGCTAGCTTGGAGATGAAGGGCTGTCCTTTCCAGAGAT
CCTGTACTATATATAAAGGCAATACAATTGTGGCCCAGACAAGCCTGATGCACAAGCTTCATCAAATTTGTGTCAGAAGGGGAAGATTTCGACTAACCATTTTTCCTGGT
TCTGTAGATCCAGCACTGATTTTGGCTTTGATTGTAATATTCTTTGATGGACGAGTCTAACAGAATTGAGCAATAAGATAATACAATTGAAAATGATATTATTAATTTTT
TAGTTCAAAAACATTTGGAGTAGAGATTTAAATCCATCACCTTCAAATTACGAGCGCAAACTTTGTCGGATG
Protein sequenceShow/hide protein sequence
MANSSDPAICSATLPIPVDLFLSKKHPDHVTNSSGDIVYTLSRQSLKKSSSIDKILLLDAAAAADPLVSIDRVNKESWQGFKGDVSEPDLLFKVQRTVNKLTRAEFKVFL
VGENLDDSNASLEMKGCPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGSVDPALILALIVIFFDGRV