CuGenDBv2

Gene ID	Sed0021737
Organism	Sechium edule (Chayote v1)
Description	protein LOW PSII ACCUMULATION 1, chloroplastic
Genome location	LG05:1007496..1012197
RNA-Seq Expression	Sed0021737
Synteny	Sed0021737
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021883 - Protein LOW PSII ACCUMULATION 1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022131239.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Momordica charantia]

4.0e-152

82.6

Show/hide

Query:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS
        M V MAN+S+ NN   PPH PR+RSHNAHNFK +  ICC    VH K   F+ GP L +SLR L   +RN  + TCSAAEKPEISSTAKIRSEVLSPFRS
Subjt:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS

Query:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA
        VRMFFYL FIASGTLGGLIATT+LLAALANSSRA++VPDI+KGLGIDFGAVA FAFLYFRENNAKNAQLARLSREE+LSNLKLRVDQ+KVIP+ +LRGIA
Subjt:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA

Query:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD
        RLVIC GPESFIMEAF+SSEPFTEQLLERGV+VVPFATD SSL+FEFDE ED+KD+TTKRKRLWRLTPVYM EWSAWLDEQKKLAGVS++SPVYLSLRMD
Subjt:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD

Query:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL
        GRVRGSGVGYPPWNALVAQLPPVKGLWSGL DGMDGRVL
Subjt:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL

XP_022963501.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita moschata]

9.5e-154

82.89

Show/hide

Query:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS
        M V MA + +CNN  RPPH  R+RSHNA N K   +ICCH   VHR   SF FGP +  SLR L Y +RN  S TCSA++KPEISSTAKIRSEVLSPFRS
Subjt:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS

Query:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA
        VRMFFYL FIASGTLGGLIATT+LLAALANSSRA+EVPDI+ GLGIDFGAVA FAFLYFRENNAKNAQLARLSREE+LSNLKLRVDQNKVI ISTLRGIA
Subjt:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA

Query:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD
        RLVIC GPESFIMEAFK+SEPFTE+LLERGVLV+PFATDASSL+FEFDE E++KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMD
Subjt:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD

Query:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL
        GRVRGSGVGYPPWNALVAQLPPVKGLWSGL DGMDGRVL
Subjt:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL

XP_022967293.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita maxima]

2.5e-154

82.89

Show/hide

Query:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS
        M V MA + +CNN  RPPH  R+RSHNAHN K   +ICCH   VHR   SF FGP +  SLR L Y +RN  S TCSA++KPEISSTAKIRSEVLSPFRS
Subjt:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS

Query:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA
        VRMFFYL FIASGTLGGLIATT+LLAALAN+SRA+EVPDI+ GLGIDFGAVAFFAFLYFRENNAKNAQLARLSREE+LSNLKLRVDQNKVI ISTLRGIA
Subjt:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA

Query:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD
        RLVIC GPES IMEAFK+SEPFTE+LLERGVLV+PFATDASSL+FEFDE E++KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMD
Subjt:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD

Query:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL
        GRVRGSGVGYPPWNALVAQLPPVKGLWSGL DGMDGRVL
Subjt:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL

XP_023554665.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita pepo subsp. pepo]

1.5e-154

83.19

Show/hide

Query:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS
        M V MA + +CNN  RPPH  R+RSHNA N K   +ICCH   VHR   SF FGP +  SLR L Y +RN  S TCSA++KPEISSTAKIRSEVLSPFRS
Subjt:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS

Query:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA
        VRMFFYL FIASGTLGGLIATT+LLAALANSSRA+EVPDI+ GLGIDFGAVAFFAFLYFRENNAKNAQLARLSREE+LSNLKLRVDQNKVI ISTLRGIA
Subjt:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA

Query:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD
        RLVIC GPESFIMEAFK+SEPFTE+LLERGVLV+PFATDASSL+FEFDE E++KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMD
Subjt:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD

Query:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL
        GRVRGSGVGYPPWNALVAQLPPVKGLWSGL DGMDGRVL
Subjt:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL

XP_038888898.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Benincasa hispida]

6.2e-153

83.58

Show/hide

Query:  MAVPMA--NLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPF
        MAV ++  N+S+CNNI RPPHF R+      +FK   +ICCH   VHRK  SF   P LP SL SLHY +RN  + TCSAA+KPEISSTAKIRSEVLSPF
Subjt:  MAVPMA--NLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPF

Query:  RSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRG
        RSVRMFFYL FIASGTLGGLIATT+LLAALANSSRA+EVPDI+KGLGIDFGAVA FAFLYFRENNAKNAQLARLSREE+LSNLKLRVDQNKVIPISTLRG
Subjt:  RSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRG

Query:  IARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLR
        IARLVIC GPESFIMEAFKSSEPFTE+LLERGVLVVP ATD S+L+FEFDE E+VKD+TTKRKRLWRLTPVYM EWSAWLDEQKKLAGVSSDSPVYLSLR
Subjt:  IARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLR

Query:  MDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL
        MDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL DGMDGRVL
Subjt:  MDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BHU5 protein LOW PSII ACCUMULATION 1, chloroplastic

1.6e-146

81.23

Show/hide

Query:  MAVPMANL--SACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPF
        MAV ++ L  S+ NNIA PPHF  + SHNA +FK   + C H   VHRK  SF+  P LP SLR   Y +RN  +   SAA+KPEISSTAKIRSEVLSPF
Subjt:  MAVPMANL--SACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPF

Query:  RSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRG
        RSVRMFFYL FIASGTLGGLIATT+LL ALANSSRADEVPDI+KGLGIDFGAVA FAFLYFRENNAKNAQLARLSREE+LSNLKLRVDQNKVIPISTLRG
Subjt:  RSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRG

Query:  IARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLR
        IARLVIC GPESF++EAFKSSEPFTEQLLERGVLVVP ATD ++L+FEFDE E+VKD+T+KRK+LWRLTPVYM EWSAWLDEQKKLAGVSSDSPVYLSLR
Subjt:  IARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLR

Query:  MDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL
        MDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL DGMDGRVL
Subjt:  MDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL

A0A5D3BG35 Protein LOW PSII ACCUMULATION 1

1.6e-146

81.23

Show/hide

Query:  MAVPMANL--SACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPF
        MAV ++ L  S+ NNIA PPHF  + SHNA +FK   + C H   VHRK  SF+  P LP SLR   Y +RN  +   SAA+KPEISSTAKIRSEVLSPF
Subjt:  MAVPMANL--SACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPF

Query:  RSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRG
        RSVRMFFYL FIASGTLGGLIATT+LL ALANSSRADEVPDI+KGLGIDFGAVA FAFLYFRENNAKNAQLARLSREE+LSNLKLRVDQNKVIPISTLRG
Subjt:  RSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRG

Query:  IARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLR
        IARLVIC GPESF++EAFKSSEPFTEQLLERGVLVVP ATD ++L+FEFDE E+VKD+T+KRK+LWRLTPVYM EWSAWLDEQKKLAGVSSDSPVYLSLR
Subjt:  IARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLR

Query:  MDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL
        MDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL DGMDGRVL
Subjt:  MDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL

A0A6J1BP58 protein LOW PSII ACCUMULATION 1, chloroplastic

1.9e-152

82.6

Show/hide

Query:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS
        M V MAN+S+ NN   PPH PR+RSHNAHNFK +  ICC    VH K   F+ GP L +SLR L   +RN  + TCSAAEKPEISSTAKIRSEVLSPFRS
Subjt:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS

Query:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA
        VRMFFYL FIASGTLGGLIATT+LLAALANSSRA++VPDI+KGLGIDFGAVA FAFLYFRENNAKNAQLARLSREE+LSNLKLRVDQ+KVIP+ +LRGIA
Subjt:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA

Query:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD
        RLVIC GPESFIMEAF+SSEPFTEQLLERGV+VVPFATD SSL+FEFDE ED+KD+TTKRKRLWRLTPVYM EWSAWLDEQKKLAGVS++SPVYLSLRMD
Subjt:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD

Query:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL
        GRVRGSGVGYPPWNALVAQLPPVKGLWSGL DGMDGRVL
Subjt:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL

A0A6J1HGA1 protein LOW PSII ACCUMULATION 1, chloroplastic

4.6e-154

82.89

Show/hide

Query:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS
        M V MA + +CNN  RPPH  R+RSHNA N K   +ICCH   VHR   SF FGP +  SLR L Y +RN  S TCSA++KPEISSTAKIRSEVLSPFRS
Subjt:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS

Query:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA
        VRMFFYL FIASGTLGGLIATT+LLAALANSSRA+EVPDI+ GLGIDFGAVA FAFLYFRENNAKNAQLARLSREE+LSNLKLRVDQNKVI ISTLRGIA
Subjt:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA

Query:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD
        RLVIC GPESFIMEAFK+SEPFTE+LLERGVLV+PFATDASSL+FEFDE E++KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMD
Subjt:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD

Query:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL
        GRVRGSGVGYPPWNALVAQLPPVKGLWSGL DGMDGRVL
Subjt:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL

A0A6J1HWD0 protein LOW PSII ACCUMULATION 1, chloroplastic

1.2e-154

82.89

Show/hide

Query:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS
        M V MA + +CNN  RPPH  R+RSHNAHN K   +ICCH   VHR   SF FGP +  SLR L Y +RN  S TCSA++KPEISSTAKIRSEVLSPFRS
Subjt:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRN--SPTCSAAEKPEISSTAKIRSEVLSPFRS

Query:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA
        VRMFFYL FIASGTLGGLIATT+LLAALAN+SRA+EVPDI+ GLGIDFGAVAFFAFLYFRENNAKNAQLARLSREE+LSNLKLRVDQNKVI ISTLRGIA
Subjt:  VRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIA

Query:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD
        RLVIC GPES IMEAFK+SEPFTE+LLERGVLV+PFATDASSL+FEFDE E++KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMD
Subjt:  RLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMD

Query:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL
        GRVRGSGVGYPPWNALVAQLPPVKGLWSGL DGMDGRVL
Subjt:  GRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRVL

SwissProt top hits

e value

%identity

Alignment

Q9SRY4 Protein LOW PSII ACCUMULATION 1, chloroplastic

1.8e-30

31.7

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQN
        K+ SEV +PFR VR FFY AF A+  +       RL+ A+     A  + +      I+ G +     L+  EN  +  Q+ +++R+ETLS L LR+  N
Subjt:  KIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQN

Query:  KVIPISTLRGIARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPF---------------------ATDASSLSFEFDESED--VKDLTTKRKRLWR
        +V+ +  LR   R VI  G +  +  A + ++ F  +LL RGVL+VP                      AT   S+  +FD      V     K +  ++
Subjt:  KVIPISTLRGIARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPF---------------------ATDASSLSFEFDESED--VKDLTTKRKRLWR

Query:  LTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL
           V   EW  W+ +Q+   GV+    VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL

Arabidopsis top hits

e value

%identity

Alignment

AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein

1.3e-31

31.7

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQN
        K+ SEV +PFR VR FFY AF A+  +       RL+ A+     A  + +      I+ G +     L+  EN  +  Q+ +++R+ETLS L LR+  N
Subjt:  KIRSEVLSPFRSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQN

Query:  KVIPISTLRGIARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPF---------------------ATDASSLSFEFDESED--VKDLTTKRKRLWR
        +V+ +  LR   R VI  G +  +  A + ++ F  +LL RGVL+VP                      AT   S+  +FD      V     K +  ++
Subjt:  KVIPISTLRGIARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPF---------------------ATDASSLSFEFDESED--VKDLTTKRKRLWR

Query:  LTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL
           V   EW  W+ +Q+   GV+    VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL

AT4G28740.1 FUNCTIONS IN: molecular_function unknown

2.0e-101

57.27

Show/hide

Query:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRNSP-----TCSAAEKP-EISSTAKIRSEVLS
        +A PMA L +        H  +   + A     H +I  H H    ++D              L  T++  P      C AA++P EIS+ A+IRSEVLS
Subjt:  MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRNSP-----TCSAAEKP-EISSTAKIRSEVLS

Query:  PFRSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQ-NKVIPIST
        PFRSVRMFFYLAFIASG+LGGLIAT+RL+ ALAN +R+ EV +IVKGLG+D GA + FAFLYF EN  KNAQ+ARLSREE L  LK+RV++ NKVI +  
Subjt:  PFRSVRMFFYLAFIASGTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQ-NKVIPIST

Query:  LRGIARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDV-KDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVY
        LRG+ARLVIC GP  FI EAFK S+ +T+ L+ERGV+VV +ATD +S   EFDE++   ++++ +RK+LWR+TPV++ EW  WL+EQKKLA VSSDSPVY
Subjt:  LRGIARLVICVGPESFIMEAFKSSEPFTEQLLERGVLVVPFATDASSLSFEFDESEDV-KDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVY

Query:  LSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRV
        LSLR+DGRVR SGVGYPPW A VAQLPPVKG+W+GL DGMDGRV
Subjt:  LSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLFDGMDGRV

Sequences

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CDS sequence

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ATGGCGGTTCCCATGGCAAACCTTTCCGCCTGCAACAACATCGCACGGCCGCCACATTTTCCTCGCTCTCGCAGCCATAACGCTCACAATTTCAAACTCCATTCCCAAAT
CTGCTGCCACTGCCATGTCGTTCATCGGAAGATGGACTCCTTTACGTTTGGCCCTGGTCTACCACAGTCGCTTCGTTCCCTTCACTACACAAAGCGGAATTCACCTACTT
GCTCCGCTGCTGAGAAACCGGAAATCAGTTCCACCGCCAAGATAAGAAGTGAAGTTCTCTCTCCTTTTCGGTCGGTTCGAATGTTTTTCTATCTTGCTTTCATTGCCAGC
GGTACATTGGGAGGACTGATAGCAACCACTCGATTGCTTGCTGCATTGGCAAACTCATCAAGAGCTGACGAAGTCCCTGATATTGTAAAAGGACTTGGAATAGACTTTGG
AGCCGTAGCTTTTTTTGCTTTTCTTTATTTCAGAGAGAACAATGCGAAAAATGCTCAGTTGGCAAGACTGTCGAGAGAAGAAACCCTTTCCAATTTAAAGCTTCGAGTGG
ACCAAAACAAGGTTATTCCTATCAGCACTCTGCGTGGGATTGCTCGTCTGGTTATTTGTGTTGGCCCTGAATCCTTTATCATGGAAGCTTTTAAATCAAGCGAGCCTTTC
ACCGAACAACTTCTCGAACGGGGCGTGTTAGTCGTACCCTTTGCCACAGATGCCAGTTCACTTAGTTTTGAGTTTGATGAAAGTGAAGACGTGAAGGATCTAACCACCAA
AAGAAAAAGACTCTGGCGCTTGACTCCAGTTTATATGCTCGAGTGGTCGGCGTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTTTCCTCTGATTCTCCCGTGTATCTAT
CTCTGCGAATGGATGGCCGTGTTCGTGGTAGCGGTGTTGGTTATCCTCCATGGAATGCTCTTGTTGCACAATTACCACCTGTAAAAGGACTATGGTCTGGTCTTTTTGAT
GGAATGGATGGGAGAGTTCTTTGA

mRNA sequence

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CTTTGGGGACGAAATTTCATATGAATTGATTCAGTTGGGTTTATAATTGATGTTTTTTCCAAAAAAATTTCACCCCTCATGCCTTTCAACCTTCGTCATCTGAGCTCTAT
GGTCTTCAAATTCAGGGTATCGTGGCGCCATCAAGACCATCCCTCGGAATTTGCTTCCGTTGATTGACGAACTTAGAAACTACTACAGATGTCAAGTCCCAGTTTCTCGA
GTGGCCAATCATGGCGGTTCCCATGGCAAACCTTTCCGCCTGCAACAACATCGCACGGCCGCCACATTTTCCTCGCTCTCGCAGCCATAACGCTCACAATTTCAAACTCC
ATTCCCAAATCTGCTGCCACTGCCATGTCGTTCATCGGAAGATGGACTCCTTTACGTTTGGCCCTGGTCTACCACAGTCGCTTCGTTCCCTTCACTACACAAAGCGGAAT
TCACCTACTTGCTCCGCTGCTGAGAAACCGGAAATCAGTTCCACCGCCAAGATAAGAAGTGAAGTTCTCTCTCCTTTTCGGTCGGTTCGAATGTTTTTCTATCTTGCTTT
CATTGCCAGCGGTACATTGGGAGGACTGATAGCAACCACTCGATTGCTTGCTGCATTGGCAAACTCATCAAGAGCTGACGAAGTCCCTGATATTGTAAAAGGACTTGGAA
TAGACTTTGGAGCCGTAGCTTTTTTTGCTTTTCTTTATTTCAGAGAGAACAATGCGAAAAATGCTCAGTTGGCAAGACTGTCGAGAGAAGAAACCCTTTCCAATTTAAAG
CTTCGAGTGGACCAAAACAAGGTTATTCCTATCAGCACTCTGCGTGGGATTGCTCGTCTGGTTATTTGTGTTGGCCCTGAATCCTTTATCATGGAAGCTTTTAAATCAAG
CGAGCCTTTCACCGAACAACTTCTCGAACGGGGCGTGTTAGTCGTACCCTTTGCCACAGATGCCAGTTCACTTAGTTTTGAGTTTGATGAAAGTGAAGACGTGAAGGATC
TAACCACCAAAAGAAAAAGACTCTGGCGCTTGACTCCAGTTTATATGCTCGAGTGGTCGGCGTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTTTCCTCTGATTCTCCC
GTGTATCTATCTCTGCGAATGGATGGCCGTGTTCGTGGTAGCGGTGTTGGTTATCCTCCATGGAATGCTCTTGTTGCACAATTACCACCTGTAAAAGGACTATGGTCTGG
TCTTTTTGATGGAATGGATGGGAGAGTTCTTTGAAGAAAACACTTGCTCTTCTGCAAAGTACTCTGCAATGGAGCTTCTCAAAACCATTACCATGGAGGACGTATTTTCA
TGCTGGACTGCCTAAGAAATGGAACTGAATCTCATGACTGCAGAAATACAGGTTTTTATAAATAAAGAGATAAAATGAGAGATTTATCCTATTTGAAATCGTGAAATGTT
TCGATCTAGAATCCAACATTCTTAGTCATTAGCTATTTTCTTCGTAATTATATTGTACAGCTGAAGTTGGTCAATTGATTGATAGTTGAATGTGTATTTAAGCGCACTCG
GTAAAAGGTAAATAACGTGATCAAGCAGTTTTATTCAA

Protein sequence

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MAVPMANLSACNNIARPPHFPRSRSHNAHNFKLHSQICCHCHVVHRKMDSFTFGPGLPQSLRSLHYTKRNSPTCSAAEKPEISSTAKIRSEVLSPFRSVRMFFYLAFIAS
GTLGGLIATTRLLAALANSSRADEVPDIVKGLGIDFGAVAFFAFLYFRENNAKNAQLARLSREETLSNLKLRVDQNKVIPISTLRGIARLVICVGPESFIMEAFKSSEPF
TEQLLERGVLVVPFATDASSLSFEFDESEDVKDLTTKRKRLWRLTPVYMLEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLFD
GMDGRVL

Sed0021737 (gene) of Chayote v1 genome