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Sed0021742 (gene) of Chayote v1 genome

Gene IDSed0021742
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:8161148..8161357
RNA-Seq ExpressionSed0021742
SyntenySed0021742
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061157.1 hypothetical protein E6C27_scaffold753G00260 [Cucumis melo var. makuwa]1.6e-1065.15Show/hide
Query:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAAS
        MAA PS+VL  +L  LLL+ V NA EGH H PSS   VA PP +NAAI  S SY WSMAMAMVAAS
Subjt:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAAS

KAG6576850.1 hypothetical protein SDJN03_24424, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1166.67Show/hide
Query:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITI-SFSYSWSMAMAMVAASWM
        MAA PS+VL  +L ALLLV VA A EGHVH PSS+P VA PP +NAA  + S SY WSMA+AMVA+SWM
Subjt:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITI-SFSYSWSMAMAMVAASWM

KAG7030901.1 Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.0e-1470.59Show/hide
Query:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAASWM
        MAA PS+VL F+LA LLLV VAN  EGHVH PSS P  + PP  NAAI  SFSYSWSM MAMVA SWM
Subjt:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAASWM

KGN53725.1 hypothetical protein Csa_014716 [Cucumis sativus]2.2e-1266.18Show/hide
Query:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAASWM
        MAA PS+VL  +L ALLL+CVANA EGH H PSS   +A PP ++AAI  S SY WSMAMAMVAASW+
Subjt:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAASWM

TYK29918.1 hypothetical protein E5676_scaffold652G00020 [Cucumis melo var. makuwa]2.0e-1065.15Show/hide
Query:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAAS
        MAA PS+VL  +L  LLL+ V NA EGH H PSS   VA PP +NAAI  S SY WSMAMAMVAAS
Subjt:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAAS

TrEMBL top hitse value%identityAlignment
A0A0A0KVS3 Uncharacterized protein1.0e-1266.18Show/hide
Query:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAASWM
        MAA PS+VL  +L ALLL+CVANA EGH H PSS   +A PP ++AAI  S SY WSMAMAMVAASW+
Subjt:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAASWM

A0A5A7V2Q5 Uncharacterized protein7.5e-1165.15Show/hide
Query:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAAS
        MAA PS+VL  +L  LLL+ V NA EGH H PSS   VA PP +NAAI  S SY WSMAMAMVAAS
Subjt:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAAS

A0A5D3E2A2 Uncharacterized protein9.8e-1165.15Show/hide
Query:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAAS
        MAA PS+VL  +L  LLL+ V NA EGH H PSS   VA PP +NAAI  S SY WSMAMAMVAAS
Subjt:  MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTCATCCCTCCTCCGTTCTCTGCTTCATGCTGGCGGCGCTGCTGCTCGTTTGCGTCGCCAATGCGGACGAGGGCCACGTGCATGCCCCGTCCTCCAACCCTGC
TGTTGCTCTGCCACCCGCCAACAACGCCGCCATCACGATCAGCTTTTCGTACTCCTGGTCCATGGCTATGGCCATGGTGGCTGCTTCTTGGATGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTCATCCCTCCTCCGTTCTCTGCTTCATGCTGGCGGCGCTGCTGCTCGTTTGCGTCGCCAATGCGGACGAGGGCCACGTGCATGCCCCGTCCTCCAACCCTGC
TGTTGCTCTGCCACCCGCCAACAACGCCGCCATCACGATCAGCTTTTCGTACTCCTGGTCCATGGCTATGGCCATGGTGGCTGCTTCTTGGATGTTTTGA
Protein sequenceShow/hide protein sequence
MAAHPSSVLCFMLAALLLVCVANADEGHVHAPSSNPAVALPPANNAAITISFSYSWSMAMAMVAASWMF