CuGenDBv2

Gene ID	Sed0021792
Organism	Sechium edule (Chayote v1)
Description	30S ribosomal protein S14, chloroplastic
Genome location	Contig00347:13684..13988
RNA-Seq Expression	Sed0021792
Synteny	Sed0021792
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR001209 - Ribosomal protein S14 IPR018271 - Ribosomal protein S14, conserved site IPR023036 - Ribosomal protein S14, bacterial/plastid

Homology

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GenBank top hits

e value

%identity

Alignment

YP_004841781.1 ribosomal protein S14 [Cucumis melo subsp. melo]

1.7e-41

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLI          +PSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009004042.1 ribosomal protein S14 [Cucumis hystrix]

1.7e-41

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLI          +PSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009317384.1 ribosomal protein S14 [Coccinia grandis]

1.7e-41

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLI          +PSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009674389.1 ribosomal protein S14 [Siraitia grosvenorii]

1.7e-41

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLI          +PSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009945415.1 ribosomal protein S14 [Sechium edule]

1.7e-41

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLI          +PSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU02 30S ribosomal protein S14, chloroplastic

8.2e-42

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLI          +PSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A1X9Q1T3 30S ribosomal protein S14, chloroplastic

8.2e-42

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLI          +PSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A218KG37 30S ribosomal protein S14, chloroplastic

8.2e-42

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLI          +PSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A249RZC3 30S ribosomal protein S14, chloroplastic

8.2e-42

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLI          +PSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A6H0ESP9 30S ribosomal protein S14, chloroplastic

8.2e-42

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLI          +PSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

SwissProt top hits

e value

%identity

Alignment

A6MM34 30S ribosomal protein S14, chloroplastic

7.2e-43

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKR+KLEQKYHLI          +PSLS+KWEIHGKLQSPPRNSAPTRLHRRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

B1NWE8 30S ribosomal protein S14, chloroplastic

5.5e-43

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHL+          +PSLS+KWEIHGKLQSPPRNSAPTRLHRRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q33C38 30S ribosomal protein S14, chloroplastic

1.2e-42

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYH I          +PSLS+KWEI+GKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q3C1I0 30S ribosomal protein S14, chloroplastic

1.2e-42

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYH I          +PSLS+KWEI+GKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q4VZN5 30S ribosomal protein S14, chloroplastic

2.2e-44

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLI          +PSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Arabidopsis top hits

e value

%identity

Alignment

AT2G34520.1 mitochondrial ribosomal protein S14

4.7e-05

41.82

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Query:  KLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        KL   PRNSA  R+  RC  TGR R+    F +S  + R +     L G T+SSW
Subjt:  KLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

ATCG00330.1 chloroplast ribosomal protein S14

4.8e-42

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Query:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MA+KSLI REKKRQKLE+KYHLI          +PSLSEKW+IHGKLQSPPRNSAPTRLHRRCF TGRPRANYRDFGLSGHILREMV ACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLI----------LPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Sequences

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CDS sequence

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ATGGCAAGGAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCTTCCATCGTTGAGTGAGAAATGGGAAATTCATGGAAAGTT
ACAATCCCCACCGCGTAATAGTGCACCCACCCGTCTTCATCGACGTTGTTTTTTAACCGGAAGACCGCGAGCTAACTATCGAGACTTTGGGCTATCTGGACACATACTTC
GTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAA

mRNA sequence

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Protein sequence

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MARKSLIQREKKRQKLEQKYHLILPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Sed0021792 (gene) of Chayote v1 genome